Oncorhynchus gorbuscha (pink salmon): 123990421
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Entry
123990421 CDS
T07892
Name
(RefSeq) laminin subunit alpha-1-like
KO
K05637
laminin, alpha 1/2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04510
Focal adhesion
ogo04512
ECM-receptor interaction
ogo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
123990421
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
123990421
09142 Cell motility
04820 Cytoskeleton in muscle cells
123990421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_G_2
Laminin_EGF
Laminin_B
Laminin_N
Laminin_II
Laminin_I
Laminin_G_3
ARA70
Motif
Other DBs
NCBI-GeneID:
123990421
NCBI-ProteinID:
XP_046146925
LinkDB
All DBs
Position
LG12:73343799..73435732
Genome browser
AA seq
3046 aa
AA seq
DB search
MRLLCCAIVLLSASSAECQQRGLFPAIFNLASNAEITTNATCGEPEPEMYCKLVEHVPGR
RIRNSQCRTCNAQSQNPKEQHPITNAIDGTNGWWQSPSIKNGRQFHWVTLTLDLHQIFQV
AYVIIKAANSPRPGNWVLERSMNGVDYTPWQYYAISDTECLTRYNITPRLGPPTYKRDDE
VICTSYYSRLVPLEHGEIHTSLINGRPSADQLTSELLDFTSARYIRLRLQRIRTLNADLM
TLSYRDPKEVDPIVTRRYYYSIKDISVGGMCICYGHAQSCPWDPVAKKLQCVCEHNTCGE
SCNECCPGYHQEPWQPGTLSDGNTCEKCNCHDKANDCYFNQTVANRKMSMNSHGDFHGGG
VCISCTQNTAGVNCEACADGFYRPNKVSPHNENPCVECSCDMKGSLTPACIRDDNHAKPE
NGLNPGQCLCMEGFAGERCDRCAFGYRDFPLCSRCECSLEGSLNIDPCTECICKENVMGA
NCDLCKQGFFNLEGSDPEGCTECFCFGVSDVCESSPWSMSQTVHSNGWLLTSESVSVYTA
PLIDEDNNLIIPNITMIQAYRFVSTWAAPESFLGKRLTSYGGFLSYSVAYDVSVDNVDRS
LPSQFDLIIEGNGRTLHQMPPRQLLLTPLNEQRVSVQLLPQGFVDLHTGQRVDRDELMTA
LADVAGLRIRGHLNASAEGELRLSTVSLDMVDINSTNTVQARDVEQCECPLGYSGTSCET
CSSGFYRLGGILFGGNCLQCECNNHATECDINRVCLDCTHNTTGPHCDQCLHGYYGNPSE
GTPEDCQRCACPLPVATNNFSPTCLLEGPGQVTCDRCQQGYTGTKCERCANGYHGDPTVA
GQECVLCECNGNVDPWQPGHCDISSGVCLKCHSHTSGDQCERCEDGYYGDAITAKNCQAC
GCHDKGSYSGVCDLLTGQCTCKPNVVGEKCDRCQVGFHALLSGQGCRECDCIQSGSVSVA
CEEDGRCQCIPGVAGDKCDRCHHSYFNYQGSGCTQCECAHTHGNCNVTTGECICPPHTRG
EKCDLCEEDHWGHDTVTGCKSCNCSEMGSYATECGNTNGQCQCRSDFAGQNCDRCAMGYR
GYPECTVCNCNINGTREEFCDEELGVCSCEAPGNCVCKDNVGGGGCDECKKGTLGLSVSN
PAGCSPCFCFGVSSDCEELGGMVRVPITLGSDPELLRVVSQSDLQGSVVGVYYQNPDMLL
DTRDIETPSLAGPYYWRLPKHYQGNKLLSYGGKLSYVVAFYAMDGAGLANYEPQVLMRGG
HLGKQVIYIDMPAPDSGVTTRQDVPLTEHKWKYFNSVSEKAVSHSDFMAVLSHIEYITIK
ASYGTGLQQSRISNITMDTALEAEQGLEDMELASLIEICECPAGYAGLSCQECAPGYYRQ
PVTELNKRGKRPLIQPCVPCRCNNHSQACDLDTGECLGCQHNTAGEHCSVCSSGYYGDVK
GSVRDCSLCACPLKENSFSPTCALEGVVGDFRCNACKPGYEGRYCERCSVGYYGNPSGPG
GRCEACQCSTAGSLHPACDSLTGQCECKAGVRGRLCDQCEARHVLDGDQCVLCDDECSRV
LLDDLDAVECSFLSVNLTGVILSPYSTLVNLENDTQEVKTLMSSYRSPDYHLTRDEEDMT
NLTQDIDGLLQKAMGVSADGEEVARSTENSVTQGAELLEYINTIQTAIQALAEQAGHLNR
TDNVEMNEAKSRRLMKQVAAMLETIRVVDLAQTNASVSTELWAAEALLQRVQKHLQEPQG
VIESQTLNISSSLTQHQQQLVDAQALLNTARENNNHTHTLLGSINTNLPQYQGLRQNVGR
LNQTAETQLEETQDILADAVNLAEDMSNGTSQLEGAKEQLEQWNPMLRKHVDALVMELRK
QEALELVYKAEDHAQELSKKAQALQSSLAEVMNTTLKATSAAHANSNIRVNIQPAEQMAN
RAILTAAMALNMTAQQEVSLTDLGSEAVQCSAKILAECLALNNSTGGSSEQVLEAKAQAA
MANSSLQRALEHLEELRVRLEESSKAVAQAKTSVSNTNQLFSDSHSTARTAESKLNEAES
RTERLYDRLKPLKTLRENLSRNLSEIREMINQARKQAASIKVSVLADKDCVRAYKPEMSS
SNFNTLTMTVKTSEPDNLLFYMGSSSSVDFMAVEMHRGKVGFLWDVGSGHAKLEYPDIQI
NNNKWHRINATRFGRHGTLSVHQLESDPLPAVKTTSPRSATVLDVNKFTLIFVGGLGGQI
KKSSAVKMTQFKGCVGEVSLNEKNIGLWNYAEREGQCRGCFMSPQTEETSFHFDGSGYSV
VEKPLRSTSTSIVLLFKTLSPNGLLLYLASNATRDFLSIELVEGQVHLTFELGSGPLTLS
SNKAYNTGSWYKITLQRNKRKAYISVMAADNSSDKEIIEAESPGSASDLNRSDLDPIYIG
GLPMSRPIRRQVVARSYVGCIKNMEIARSNFDLLRDSYGVKKGCVLEPIRSVSVLREGYV
ELPSMSLGSQGELLASFSTRNHTGIILAGFSKAGTRKRRQARQPILAVMLVSGHLEVHVN
MVEGGSIHKVVVKSRSGSFSDGQEHSVILQRNRKTMTVLVDEDHQETVRLSSEKASLTFS
SLYMGGLPPEEGAGLLRTTSSFYGCIRNLALDAKLLDLSAAVKYHNVDMDSCLLEERPKR
VLLPDDTDLEAEPTLDPSRPHPPPPTQLSALTPGTLTCASMDNSTSLPEANQFGISRHSH
KVLNINPNTVRRSFSLELSVRTFAQSGLIYYMAHANQMDYATLQLLGGRLFFTCDKGSGP
ATASFPVPVNDGQWHTVKTDFNKKSVVISVDSQASAPVLAKGNTLDVENKLYLGGLPHTY
TAKKIGNVTHSLAGCIQKVILNSVELDTQSPVSEHLTAHCFTAAQDGTFFSGSGYAALMK
EGYKVGSDVTVALEFRSTAPDGVLLGVSSAKVDAIGLELASGQAVFHVNNGAGRVSATSR
LGRWLCDGRWHTLLAKKTKNALSLSVDGVTVLTDNPHPQSTSAETKDPIYVGGFPVGVKQ
NCLTSRSSFRGCMRNIRLIKGHVIDILDFSTAFTLQGVSPHSCPAT
NT seq
9141 nt
NT seq
+upstream
nt +downstream
nt
atgaggctcttatgctgtgctattgtgctgctatctgcatcctccgcggagtgccagcaa
agaggtctcttccccgccatcttcaacctggccagtaatgcagagatcaccaccaacgcc
acctgtggagagcctgagccagagatgtactgtaaactggtggaacacgtaccaggacga
cgcatccgcaactcccagtgtcggacctgtaatgcccagagtcaaaaccccaaagagcaa
catccaatcaccaacgccatcgacggcaccaacgggtggtggcaaagccccagcattaaa
aatggcagacagttccactgggtgaccctcacactagatttacaccagattttccaggtg
gcctacgtcatcatcaaggcagccaactctcctcgtcctggtaactgggtgctggagcgt
tcaatgaacggtgtggattacacaccctggcagtactacgccatcagcgacacagaatgt
ctgacccgttacaacatcaccccccgcctcggaccccccacctacaaacgagacgacgag
gttatctgtacatcttactactcgcggctcgtacccctggagcacggagagatccacacg
tctttgatcaatgggcggcccagtgctgaccaactgacctcagagttgctggacttcacc
tcagcccgctacatccgcctgcgtctgcagagaatccgcacgctcaatgccgacctcatg
accctgagctaccgcgaccccaaggaggtggaccccatcgtcaccagacggtactactat
tcaatcaaagacatttcagtgggtgggatgtgcatctgttacggacacgcccagagctgt
ccctgggaccccgttgccaagaagttgcagtgtgtatgtgagcacaatacctgtggggag
agctgtaatgagtgttgccctggctaccaccaggaaccgtggcaaccgggaaccctctcc
gatggcaacacctgcgagaaatgtaactgccacgacaaggccaacgactgctactttaac
cagacggtggccaaccgcaagatgagcatgaactcacatggtgacttccatggcgggggc
gtttgtatcagctgtacccagaacacggccggtgtcaactgtgaggcctgcgcagatggc
ttctacagacccaacaaggtgtctccgcacaatgagaacccatgtgtggagtgcagctgt
gacatgaaggggtctttgactcctgcctgtatcagagatgacaaccacgccaagcctgag
aatggtctgaacccaggccagtgtctgtgtatggagggctttgcgggcgagcgctgtgac
cgctgtgcctttggctacagggacttccccctgtgttcacgctgtgagtgcagtctggag
ggcagcctcaacatcgacccctgcacagagtgcatctgcaaggagaacgtgatgggggcc
aactgtgacctgtgtaagcagggtttcttcaacctggagggcagtgacccagagggctgc
actgagtgtttctgcttcggcgtgtctgacgtgtgtgagagctctccctggtctatgtct
cagacagtgcactccaatggatggctccttacctctgaaagcgtctctgtctacacggca
cccctcatagatgaagacaacaacctcatcatcccaaacatcaccatgatccaagcgtac
cgttttgtttctacatgggccgccccagagtccttcctggggaaaaggctgacatcgtac
ggagggtttttgagctacagtgtggcatatgatgtttcagtggacaacgtggacaggtct
ctgccgtcacagtttgatttgatcatcgagggtaatgggaggaccctgcatcagatgccc
cccaggcagctcttgttgacgcccctgaacgagcagcgtgtttctgtgcagctcttgcca
cagggcttcgtagacctgcacacaggtcagagggtggacagggacgagctgatgactgca
ctggccgacgtggccgggctgaggatcagaggtcacctcaatgccagtgcagagggggaa
ctcagattgagcactgtatctctggacatggtagacatcaattctactaacacagtccag
gcccgggacgtggagcagtgtgagtgtcccttgggctactctggcacatcctgtgagacc
tgttcatctgggttctatcgcctcggggggatcctgttcggaggcaactgtctccagtgt
gagtgtaacaaccatgctacggaatgtgacatcaacagagtgtgtctggactgtactcac
aataccactgggccccactgtgaccaatgcctccacggttactatgggaacccatctgag
ggcaccccggaggactgccagagatgcgcttgcccgctgccagtggcaacgaacaatttc
agccccacctgtctcctggagggccctgggcaggtgacatgtgaccggtgtcagcagggt
tacactgggactaagtgtgagaggtgtgctaacggttaccatggcgacccgacggtggca
ggccaggagtgcgtgctgtgtgagtgtaacggtaacgtggacccctggcagccgggccac
tgtgacatcagcagcggtgtgtgtctgaagtgtcacagccacaccagcggagaccagtgt
gagaggtgtgaggacggctactacggtgacgccatcaccgccaagaactgccaggcttgt
ggttgccatgacaaagggtcgtactcgggagtgtgtgacctgctcactggacagtgtacc
tgcaaacccaacgtggtgggagagaagtgtgaccggtgtcaggtgggcttccacgctctt
ctcagtggacaggggtgcagagaatgtgactgtatccagtcaggatctgtgtccgtggcc
tgtgaggaagatgggaggtgccaatgcatcccaggggtggcaggggacaagtgtgaccgc
tgtcatcacagttactttaactaccagggcagcggctgtacacagtgtgagtgtgcccac
acccatggcaactgtaacgtgacgacaggcgagtgtatctgtcctccccacaccagagga
gagaagtgtgatctgtgtgaggaagatcactggggtcacgacactgtgacaggatgtaag
tcatgtaactgcagtgagatgggcagctatgccacagagtgtggcaacaccaacgggcag
tgccagtgccgctctgatttcgctgggcagaactgtgaccgctgtgccatgggctacagg
ggctacccagaatgcacggtgtgcaactgcaacatcaatggcaccagagaggagttctgt
gatgaggaactgggcgtgtgcagctgtgaggccccagggaactgtgtgtgcaaggacaat
gtgggtggaggtggctgtgatgagtgtaagaagggaaccttgggcctatctgtttctaac
ccggccggctgcagcccctgcttctgtttcggggtctcctcagactgtgaggagctgggt
gggatggtccgggtgccaatcacattgggttctgacccagagctgctgcgtgtggtcagt
cagagtgacctccagggcagtgtagtgggggtctactaccagaacccagacatgctgcta
gacactagggacatagagacccccagcctggctggaccctactactggaggctgcctaaa
cactaccagggaaacaagttgttgtcgtatggagggaagctatcctacgtggtggcgttc
tatgctatggacggggccggcctggccaactacgagcctcaggtcctgatgagggggggt
catctggggaagcaggtcatctacatagacatgcctgcccctgacagcggggtaacaact
aggcaggacgtcccactgactgagcacaagtggaagtatttcaactctgtgtcagagaaa
gctgtgagtcactctgacttcatggcagtcctgagccacattgagtacatcaccatcaag
gcatcgtatggtacagggctgcagcagagcagaatatccaatatcactatggatacggcc
ctagaggcggaacaagggttggaggatatggagttggcgagtctgatcgagatctgtgaa
tgtccagctggctacgccggactgtcctgccaggagtgtgccccgggctactaccgccaa
cccgtgactgagctgaacaagcgggggaagagacccctgatccagccgtgtgtgccctgc
cgttgtaacaaccacagccaggcctgtgacctggacacgggagaatgtctgggctgccaa
cacaacacagcaggggagcactgtagcgtgtgttcctcggggtactatggagacgtgaaa
ggctccgtcagggactgctcgctgtgtgcctgccccctcaaagagaacagcttcagtcct
acctgtgctctagagggagtggtgggagacttccgctgcaacgcctgcaagcccggctat
gaggggcgctactgtgagaggtgttcagtgggttactatgggaacccgtctggtccagga
gggaggtgtgaggcgtgtcagtgtagtactgcaggttctctccatccagcgtgtgactct
ctgacgggccagtgtgaatgtaaagccggggtcaggggacgcctgtgtgaccagtgcgag
gcgagacacgtcctggacggggaccagtgtgtcttgtgtgatgatgagtgtagcagggtg
ctcctggatgacctggatgcagtagagtgctccttcctgtctgtcaacctgaccggggtc
atcctgtcaccctacagcacactggtcaacttggagaacgacacgcaagaggtcaagact
ctgatgtcttcgtataggagcccagactatcacctgaccagggatgaggaggacatgaca
aacctcacccaggacatagacggactgctacagaaggctatgggtgtgtctgctgatgga
gaggaagtggcccggtccacagagaacagcgttacccagggggccgagcttctggagtac
atcaacaccattcagactgctatacaagccctggcggagcaagctggccatctgaacagg
acagacaacgtggagatgaacgaggctaagagcagacggctaatgaagcaggtggcggcc
atgttggaaacaatcagagtggtcgacttagcccagaccaacgccagcgtctctacagaa
ctctgggctgccgaggctctcctccagcgggtgcagaagcacctccaggagccccaggga
gtgatagagtcccagaccctcaacatctccagcagtctgacccaacaccaacagcagcta
gtggacgcccaggcccttctgaacactgccagggagaacaacaaccacacacacaccctg
ctgggcagcatcaacaccaatctgccacagtaccagggtctgaggcagaatgtgggccgg
ctgaaccagacggcagaaacacaactggaggagactcaggacatactggctgatgctgtc
aatctggcagaggacatgagcaacggcacctctcaactggagggggccaaggaacagctg
gagcagtggaaccccatgttgaggaagcatgtggatgctctggtgatggagctgaggaag
caagaggctctggagctggtctacaaggctgaggaccacgcccaagaactgagcaagaag
gcccaggctctgcagagttctctagcggaggtgatgaataccactctgaaagccaccagt
gcagcgcatgccaactctaacatcagagttaacatccagcctgcagagcagatggctaac
cgagccatcctgactgctgctatggccctcaacatgacggcccagcaagaggtgtcactt
actgatctgggatctgaggctgtgcagtgtagtgctaagatactggctgagtgtctggcc
ctgaacaacagcactgggggctccagtgagcaggtgctggaggccaaagcgcaggctgcc
atggccaactcctccctgcagagggcactggagcacctggaggagctcagggtcagactg
gaggagtccagcaaggcagtggcccaggccaaaaccagcgtctccaacacaaaccagctg
ttctctgactcacactcaactgccaggactgctgagtctaagctgaatgaggcagagagt
cgtaccgagaggctgtatgaccgtcttaaacccctgaagaccctgcgggaaaacctgagc
agaaacctgtctgagatcagagagatgatcaaccaggcccgcaaacaggctgcctcgatc
aaggtgtcagtgctggcagacaaagactgtgtgagggcctacaagcctgagatgtcctcc
agtaacttcaacactctaactatgaccgtcaagaccagcgagcctgacaacctgctcttc
tatatgggcagcagctccagcgtggacttcatggcagtggagatgcatcgcggcaaggtg
gggttcttgtgggatgtgggttcaggccacgccaaactggagtaccccgacatccagatc
aacaacaacaagtggcatcgcatcaacgccacacgctttgggaggcacggcacgctgtca
gtccaccagctggagtcagaccccctgcccgcggtcaagaccacctcaccacgctctgct
acggtcctggatgtcaacaagtttaccctcatatttgttggtggcctgggaggccagatc
aagaagtcctccgcagtgaagatgacccagttcaagggctgtgtgggggaggtgtcgctc
aacgagaagaacatcgggctgtggaactacgccgagagggagggccagtgtcgcggctgc
ttcatgagtccgcagacggaggagacgtccttccactttgatggcagtggctactcggtt
gtagagaaacccctccgctccacctccacctccatcgtactgctgttcaagaccctctcc
cccaacggcctgctgctctacctggcctccaatgccacgagggacttcctgtccattgag
ctggtggagggccaagtgcatctaacctttgaacttggctctggtcctctgaccctctcc
tccaacaaagcctataacactggcagctggtacaagatcaccctgcagaggaacaaacgc
aaagcttatatatctgtgatggctgcagacaactcatcagacaaagagattatagaggca
gagtctcctggctccgcctctgatctcaaccgttccgacctggacccaatctacatcggg
ggactgcccatgtctcgacctatcaggagacaagtagtagcacggtcctatgtgggctgc
atcaaaaacatggagatcgcccgctccaactttgaccttctccgagactcctatggtgtc
aagaaaggctgtgtgttagagccaatccgcagtgtgtctgtactgagagagggctatgtg
gagctgccatcaatgtctcttggctcccagggggagctgctggcctccttctccacccgc
aaccacactggcatcatcctggcaggcttcagcaaggcaggcacccgcaaacgcagacag
gcacgccagcccatcctggcggtcatgctggtgtcggggcacttggaggttcacgtcaac
atggtggagggcgggagcatccacaaggttgtggtcaaatcacgctctgggagcttcagt
gacggacaggagcactctgtcatcctacagaggaacaggaagacgatgactgtactggtg
gatgaggaccaccaggagacagtgcgcctgtcctcggagaaggcctctctgaccttctcc
tctctgtacatgggtggcctcccgccagaagagggcgccggactgctacgaaccacttcc
tccttctacggctgcatcaggaacctggccctggacgccaagttgttggacctgtcagct
gcagtgaagtaccacaatgtggacatggacagctgtctattggaggagaggcctaagagg
gtcctactacctgatgacactgacctggaggccgagcccaccctggacccttccagaccc
catccaccaccgcccactcagctcagcgctctcacccccggcacgctcacgtgtgcatcg
atggacaacagcacatccctcccagaggccaatcagtttggcatctccagacacagtcat
aaggtcctcaacatcaaccccaacacagtgaggaggagtttctctctggagctgtctgtg
cgtacctttgcccagagtggtttgatctactacatggctcatgccaaccagatggactac
gccactctgcagctgctagggggtcgtctgttcttcacctgtgacaagggcagtggcccc
gccaccgcctccttccctgtgccggtcaacgacggccagtggcacacagtgaagactgac
ttcaataagaagagtgtggtaatcagtgtagacagccaggcgtcagctccagtgctggct
aaaggcaacactctggatgtagagaacaagctgtacctgggaggactgccccatacctac
accgccaagaagataggcaacgtgacccacagcttggcgggctgcatccagaaggtgatc
ctgaacagcgttgaacttgacacccagagtccagtgtctgaacacttgactgctcactgt
ttcactgcagcccaggacgggaccttcttcagtgggagcggatatgctgctctgatgaaa
gaggggtacaaggtgggttcagacgtgacggtggcgctggagttccgcagcacggcgcct
gacggggtcctcctgggggtcagcagcgccaaggtggacgccatcggcctggagcttgcc
agcggacaggcggtgttccacgtgaacaacggcgccgggcgggtgtcggccacgtcgcgg
ctgggccggtggctgtgtgacggccgctggcacaccctgctggccaagaagaccaagaac
gctcttagtctgagcgtggacggggtcacggtgctcactgacaacccccacccccagtct
acctccgctgagacgaaggacccaatctacgtgggaggcttccctgttggagtgaaacag
aactgcctgacttccagatcgtcattccgtggttgtatgcgtaacatccgcctgatcaag
ggccacgtgatcgacatcctggacttcagtaccgcattcaccctccagggagtgtctcca
cactcctgccccgccacataa
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integrated database retrieval system