Oncorhynchus gorbuscha (pink salmon): 123990564
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Entry
123990564 CDS
T07892
Symbol
matn3a
Name
(RefSeq) matrilin-3a isoform X1
KO
K19467
matrilin
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
123990564 (matn3a)
Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
123990564 (matn3a)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
VWA
Matrilin_ccoil
VWA_2
FXa_inhibition
cEGF
EGF_LRP2
EGF_CA
Plasmod_Pvs28
hEGF
Motif
Other DBs
NCBI-GeneID:
123990564
NCBI-ProteinID:
XP_046147118
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All DBs
Position
LG12:14458948..14467813
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AA seq
550 aa
AA seq
DB search
MKSLFGSLVYCIFLFVSDVYGTYGLNGFDPQQVTAQSYAQRRNIAPPPLRTLAPSVHASA
YRHRGYHYHHQPPGIHLPVVYQQPGPLSPPVAYPRSSVPLPPYQHRAPPVVYNLYQDFSP
PVVHHHPFKVFFPPVRHHHKFKGKCPHILPLVQPKPTTLPTTPVVYLPTTVPTLPSVTTL
QPVMTTLPLEVTTTPVPPTLPVSTQSGVVITTASVETATDNSCRSRPLDLVFIIDSSRSV
RPGEFEKVKIFLADMVDTLDVGPEATRVAVVNYASTVKIEFLLKAHLNKPNMKQAITRIE
PLAAGTMTGLAIKSAMTEAFTEESGARPKSKNIAKVAIIVTDGRPQDQVEEVSAAARGSG
IEIYAVGVDRADMTSLRLMASNPLEDHVFYVETYGVIEKLTSKFRETLCGWDPCDMGHDC
EDMCVSSSSNNSYHCECREGYLLNADKKTCSQSQTRVDPCAMGHDCEHICVSSNASHHCK
CRKGYILNLDQKTCTLKQIKAVVVVEEDPCKCEARLAFQMQTQAALQEITARLADMTGRV
EQIENILGPV
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctttattcgggagtctcgtctactgcattttcctctttgtgtctgatgtatac
ggaacgtacggtttgaatggattcgatccacagcaggttactgctcaaagttatgcacaa
cgtagaaatattgccccgccaccgctgcggacgctcgctccttcagttcacgccagtgca
tacaggcatagaggctatcactaccaccaccagccaccagggatccacctgcccgtggtt
taccaacaacctggccctctatctccacccgtggcttaccccagatcctctgtcccctta
ccaccttaccaacacagagcgccaccggtggtgtacaacctataccaagacttttcacct
ccagtagttcaccaccacccgtttaaagttttttttccaccagtgaggcaccaccacaaa
ttcaaaggtaaatgtccacatattttacctctggtacagcctaaacctactacactgcca
acgacccctgtggtgtacctacccaccacagttccaactctaccatcagtgactacattg
caaccggtgatgaccaccttgccactggaggtgaccaccacccctgtgccgccaacacta
cctgtcagtacccaaagcggcgtcgtcatcaccaccgccagtgtggagacagcaacagac
aattcgtgcaggagccgtcccctggacctggtcttcatcatcgacagctcccgcagcgtg
cgccccggcgagtttgagaaggtcaagatcttcctggccgacatggtcgacaccttggat
gtgggaccagaagccacccgtgtggccgtggtcaactatgccagcacggtcaagatcgag
ttcctgctcaaggctcacctgaacaagcccaacatgaagcaggctatcacccgcattgag
cccctcgccgccggcaccatgactggcctggccatcaagtcggccatgactgaggccttc
accgaagagtcaggcgcccggccaaagtcaaagaacatcgccaaagtggccatcatcgtg
acagacgggcgtcctcaggaccaggtggaggaggtgtcagcggctgcccgggggtccggc
atcgagatctacgcggtgggggtggaccgagccgacatgacctctttgcggctgatggcc
agcaaccctctggaagaccacgtgttctacgttgagacctacggcgtcatcgagaagctc
acctccaaattcagggagaccctgtgtggttgggacccctgtgacatgggacacgactgt
gaggacatgtgtgttagcagcagcagcaacaactcctatcactgcgagtgtcgggaaggg
tatctcttgaacgcggacaagaaaacatgttcccagagtcagacacgtgtggacccctgt
gccatgggacacgactgtgagcacatatgtgtcagcagcaacgcgtcccatcactgcaag
tgtcggaagggctatatcttgaacctggaccagaaaacgtgtactctgaaacagattaag
gcggtggtggtggtggaggaggacccttgtaagtgtgaagccagactggccttccagatg
cagacacaggccgccctccaggagatcactgccagactagctgacatgacaggaagggtg
gaacagattgagaacattttgggacctgtctaa
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