Oncorhynchus gorbuscha (pink salmon): 123990572
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Entry
123990572 CDS
T07892
Symbol
capn3b
Name
(RefSeq) calpain-3b isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
123990572 (capn3b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ogo01002
]
123990572 (capn3b)
Enzymes [BR:
ogo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
123990572 (capn3b)
Peptidases and inhibitors [BR:
ogo01002
]
Cysteine peptidases
Family C2: calpain family
123990572 (capn3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Calpain_u2
EF-hand_1
EF-hand_6
EF-hand_7
CAPN13-like_C_EFh
EF-hand_5
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
123990572
NCBI-ProteinID:
XP_046147142
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All DBs
Position
LG12:complement(14627602..14665044)
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AA seq
768 aa
AA seq
DB search
MALVEETSVKVALETEASPDVPEGKTDYPFTASNSIYTAILSRNEAVKDAKRLKNFLELR
DKYVHKKVLFEDPLFPPNDSSLWYSSKFPIEFEWKRPTEICDNPQFIIDGASRTDICQGE
LGDCWLLAAIACLTLNDKLLYRVIPSDQSFTENYAGIFHFQFWRYGEWVDVVVDDRIPTS
NNQLVFTKSFRKNEFWSALLEKAYAKLHGSYEALKGGNTLEAMEDFTGGVTEFFEMSEAP
KELYKIMKKALERGSLMGCSIDALLPSHCETETANGLVRGHAYSITALEECDKLKVTKDT
KIRLVQMRNPWGMVLWKGPWNAKSKEWSTISSSDKARLKKKTVETSETWISFEDFKKNFT
KLEICNLTPDTLLDDRSHSWTVAVNEGRWVRGSSAGGCRNFPDTFWTNPQYRMRLYEEDD
DPDDPEHVACTVMVALMQKGRRKDRSKGAKLYTIGFSIYEVPKEMIGSQQHLQKDFFLYN
ASKAKCKSYINLREVSERFCLPPGEYVIIPSTFDPHEEGEFILRVFSEKNSTSEETENTI
RSDQIEQGKNRTKKGKPIVFVSDRAKANKEIEQDDIEVQKEKKEKPKPQQPDEESGEHKM
FRAIYQQIAGEDMQICANELKVVMKRVLEKHNDMKTDGFSLESCRSMIALMDTDGTGKLN
LQEFKHLWSKIKAWQLIFKKYDKDKSSTISSFEMRNAVNDAGFRLNNQLYDIITMRYADE
HLNIDFDSFICCFVRLEGMFRTFHAFDKNGDGTIKLNVLEWLQLTMYA
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggcccttgttgaggaaacttcagtgaaggtggcattggaaactgaagcatcacctgat
gtacctgagggtaagactgactaccccttcacggccagcaacagtatctatactgccatt
ttgagcagaaacgaggccgtcaaagatgccaagcgcctgaagaacttcttagagttgcga
gacaaatacgtacacaagaaagtcctgtttgaagaccctctgttcccacccaatgattcc
tctctttggtacagcagcaaatttcccattgaatttgagtggaagcgcccaacggaaatc
tgtgacaacccccagttcatcatagacggagctagtaggacagacatctgtcaaggagag
ctgggtgactgctggctgcttgctgctattgcctgtctgacactgaatgacaagctgctg
tacagagttatcccatcagaccagagtttcacagagaactacgctggtatcttccatttc
cagttctggcgttatggcgaatgggtggacgtcgtggtggacgaccgtatccccacctcc
aataaccagctggtgttcaccaagtccttcaggaagaacgagttctggagcgctctgctg
gagaaggcttatgccaagttgcacggttcctacgaggccctgaaaggtggcaacaccctg
gaggccatggaggacttcactgggggtgtgacagagttctttgagatgtccgaggctcca
aaagaactctacaagatcatgaagaaagccctggagagaggctctctgatgggctgttcc
atagacgccttgctgccgagtcactgtgagactgaaactgcgaatggactggtcagaggc
cacgcctactctatcactgcactagaggagtgtgacaagcttaaggttaccaaggatacc
aagattcgcctagttcaaatgcggaacccctggggaatggtgctatggaaagggccgtgg
aatgccaagtccaaagaatggtccaccatctccagctcagacaaggccaggctgaagaag
aagacggttgagacgagcgagacttggatatcctttgaggacttcaaaaagaacttcacc
aagctggagatctgtaacctgacccctgacacacttctggacgacaggtcccatagctgg
acggtggcggtcaacgagggccgctgggtacgaggcagctccgccggaggctgcaggaac
ttcccagacacgttctggaccaacccgcagtaccgcatgcgtctgtatgaggaggacgac
gaccccgacgaccccgagcatgtggcatgcaccgtcatggtggccctgatgcagaagggc
cggaggaaagaccgcagcaagggtgccaagctttacaccatcggattctccatctacgag
gtgcccaaagagatgattgggagccagcagcacctgcagaaagacttcttcctttacaat
gcctccaaggccaaatgcaagtcctacatcaacctgcgtgaggtgagcgagcgattctgc
ctgccccccggggagtacgtgatcatcccttcgacctttgacccccatgaggagggagag
tttatcctcagagtcttctccgaaaagaacagcacctcagaggaaaccgaaaatacaatt
aggtcagaccaaatagagcaaggcaaaaacaggacaaagaaaggaaagcccatcgtgttt
gtatcagacagagcgaaggccaacaaggagattgagcaagatgacatcgaggttcagaag
gagaagaaagagaaaccaaaaccacagcaaccggatgaggagagcggagaacacaaaatg
ttcagggccatttaccagcagattgctggggaggacatgcagatctgtgccaacgagctc
aaggtggtcatgaaaagggtactggaaaaacataatgacatgaagacggacggcttcagc
ttagagagttgccggagcatgatcgctttgatggatacggacggcacaggaaaactgaac
ctgcaggagttcaaacacctgtggagtaagatcaaagcctggcagctgatcttcaagaag
tatgacaaggacaaatccagcaccatcagcagttttgagatgaggaacgcagtcaatgat
gcagggttccgcttaaacaaccagctgtatgacatcatcacgatgcgctacgctgacgag
cacctcaacatcgactttgacagcttcatctgctgcttcgtcaggctagaaggcatgttc
aggacgttccatgcctttgacaaaaacggagacggcacaatcaagctcaacgtcctcgag
tggctccagttgaccatgtatgcttag
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