Oncorhynchus gorbuscha (pink salmon): 123990700
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Entry
123990700 CDS
T07892
Name
(RefSeq) receptor-type tyrosine-protein phosphatase kappa-like isoform X1
KO
K06776
receptor-type tyrosine-protein phosphatase kappa [EC:
3.1.3.48
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ogo01009
]
123990700
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
123990700
Enzymes [BR:
ogo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
123990700
Protein phosphatases and associated proteins [BR:
ogo01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
123990700
Cell adhesion molecules [BR:
ogo04515
]
Immunoglobulin superfamily
Type II RPTP family
123990700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Fn3_PTPRU
MAM
fn3
PTP-SAK
DSPc
I-set
ig
Ig_3
Tc-R-P
Ig_2
PTPlike_phytase
Y_phosphatase3
Motif
Other DBs
NCBI-GeneID:
123990700
NCBI-ProteinID:
XP_046147411
LinkDB
All DBs
Position
LG12:complement(21488630..21659685)
Genome browser
AA seq
1502 aa
AA seq
DB search
MDTCRLGFILLYFSILSVGAQFTAAQMDKPVKGGCTFDDGPAQCDYQQDPYDDFDWTHVS
AQEVPYLSSELPQGSYMMVDSSQHDAGEKARIQLPVMKENDTHCIDFNYLLYTQDGSSPG
ILNILVKVNKGPLANPIWNVTSYTGKDWLRAELAISTFWPNEYQVIFEAEVSDGKTGFIA
IDDIQVLSYPCDKSPHFLRLGDVEVNAGQNATFQCIATGRDTVNNRLWLQRRNGEDIPVA
STKNINHRRFAASFRLKEVTSLDQDLYRCVTQSERGSGVSNFAGLIVREPPRPIAPPQLL
GVGPTYLLIQLNANSIFGDGPIILKEVEYRMTSGSWIETHAVNSPNYKLWHLDPDTEYEI
RVLLTRPGEGGTGQPGPPLITRTKCAEPMRTPKRLKIAETQARFIAVDWESLGYNITRCH
TFNVTICYRYYNANNQTKADCLDMDPKAPRHVVGNLPPNTNVSLKMILTNPEGRKESDET
IIQTDEDVPGPVPSQSMKATPFEDRIFLYWKEPLEPNGIITQYEIAYSGIRSFDPSVPIM
RPPLVVSLPWNTSHHVFNQLHPGTTYQFIIRASTIKGFGPPTTLNVTTNISAPTLEEYDG
SEAFLNETATTITVLLKPAQAKGAPISAYQIVVEELNPHRTRREASSVDCYQVPVPFHSA
SSGGSSYYFAAELPPGNLPEPSPFTVGDNKTYHGFWNPPLTPRKNYNIYFQAVSSVEKES
KTQCLRLATKGATEEPEVIPDPAKQTDRVVKIAGISAGVLVFILLVLVAILLVKKSHGGF
TTKNWSVRRSYYSYSYYLKLAKKRKDAIGNTRQEMTHMVNAMDRSYADQSTLHTEDPMAV
TFMDSHNFSNRLPNDPLVPTAVLVPITDENHTAAAAESSRLLDVPRYHCEGTESPYQTGQ
LHPAIRVADLLQHINLMKTSDSYGFKEEYESFFEGQSASWDVAKKDTNRTKNRYGNIIAY
DHSRVILQPMEDDPSSDYINANYIDVSGAASSIGERVRHDRPSLIWLYRDGYQRPSHYIA
TQGPVHETVYDFWRMVWQEQSACIVMVTNLVEVGRVKCYKYWPDDAEVYGDFKVTFVEVE
PLAEYVVRTFTLERRGFNELREVKQFHFTGWPDHGVPYHATGLLSFIRRVKISNPPSAGP
IVVHCSAGAGRTGCYIVIDIMLDMAEREGVVDIYNCVKALRSRRINMVQTEEQYIFIHDA
ILEACLCGETAIPACEYKAAYYDMIRIDSQSNSSHLKDEFQTLNSVTPQPQPEDCSIALL
PRNHEKNRFMDMLPPDRCLPFLITIDGESSNYVNAALMDSYRQPAAFIVTQHPLPNTVKD
FWRLVYDYGCTSLVMLNEIDLAQGCPQYWPEEGTLRYGPVQVECMSCSMDCDVISRLFRI
CNLTRPQEGYLMVRQFQYLGWAAHREVPASKRSFLKLILQVDKWQEECEEGEGRTIIHCL
NGGGHSGMFCAISIVCEMIKRQNVVDVFHAVKSLRNSKPNMVDSPDQYRFCYDLALEFIE
TS
NT seq
4509 nt
NT seq
+upstream
nt +downstream
nt
atggatacgtgtagacttggcttcatactactctacttttcaattctaagtgttggtgct
caattcacggcagcgcaaatggacaaaccggtgaagggtggctgtacatttgacgatggc
ccagcccagtgtgactaccagcaggatccctatgacgactttgactggacccatgtcagc
gcacaggaagtgccatacttgtcatctgaactgcctcaaggttcctacatgatggtggac
tcctcccagcacgatgccggagagaaggcacgcattcagctgccagtaatgaaggaaaac
gacacccactgtattgacttcaactacttattgtatactcaagatggctccagcccgggg
atcctgaacatcctggtaaaggttaacaaaggtcccctggctaatcccatctggaatgtg
accagctacaccgggaaggactggctccgggctgagctggccatcagtaccttctggcct
aacgagtatcaggtcatatttgaggcggaggtctcggacgggaagactggcttcattgcg
attgatgacatccaggttctgagctatccatgtgataaatcgcctcacttcctgcgcctg
ggagatgtggaagtcaacgccgggcagaacgccaccttccagtgcatcgccaccggccgg
gataccgtgaacaacaggctgtggctgcagaggagaaatggggaggacattcccgtggcg
tcaactaagaacatcaaccacaggcggttcgctgcctcgtttagactcaaggaagtgact
agtctggaccaagacctttaccgatgtgtcacccagtcagagagaggatctggtgtgtcc
aacttcgccggactcatcgtcagagaacccccgcggcctatcgcacctcctcagctgctg
ggcgtggggcccacctaccttctgatccagctcaatgccaactccatattcggggatggc
cccatcattctgaaggaggtggagtatcgcatgacatcagggagctggatagagacccat
gctgtcaactcccctaactacaagctgtggcacctggacccagacacagagtacgagatc
cgtgtgctgctcaccagaccaggggaggggggcaccggccagcctggaccacctctcatc
accaggacaaagtgtgccgaaccaatgcggaccccgaagagactgaagattgcagagacc
caggccagattcatcgctgtggactgggagtctctgggctacaatatcacccgctgccac
accttcaacgtcaccatctgctaccgttactacaacgccaacaaccagaccaaggcagac
tgcctggacatggaccccaaggccccacgccacgtggtgggcaacctaccccccaacacc
aatgtcagcctcaagatgatcctcaccaaccccgaaggacgcaaggagagcgatgagacc
atcatccagacagatgaagatgtgcctggccccgttccaagccagtccatgaaagccaca
ccgtttgaggatcggatcttcctttactggaaggaaccactggagcccaatgggatcata
actcagtatgagatcgcctacagtggtattcggtcctttgacccctcggtgccaataatg
cgcccccctctggtcgtttctctgccctggaacacttctcaccacgtcttcaaccagctg
caccctggtaccacctaccagttcatcatacgagccagcaccatcaagggcttcggcccc
ccgaccacactcaacgtcaccaccaacatctcagccccaacactggaagagtatgatggg
tccgaggcgtttctgaatgaaacggccaccaccatcaccgtcctactgaagcccgctcag
gccaaaggtgcccctatcagcgcttatcagatcgtggtggaggagctgaacccacatcgc
acacgcagggaggccagctccgtggactgctaccaggtcccagtccccttccacagtgct
tccagtggtggctcgtcttattactttgcggcagaactgccaccagggaaccttcccgaa
ccctctccgttcacggtgggcgacaacaagacgtaccatggcttctggaaccctccactc
acccccaggaagaactataatatctacttccaggccgtcagcagtgtggagaaggaatca
aaaacacaatgtctgagacttgctacaaaaggagctacagaggaaccagaggtgatccca
gacccagccaagcagacagacagggtggtgaagattgctggcatcagtgccggggtgctg
gttttcatcctactggtgctggtggccatccttctggtcaagaagagtcatggaggcttt
actacgaagaattggtcagtcaggaggagctactattcttactcatattacctgaaactg
gccaagaagcgcaaagatgccattgggaatactcgtcaggaaatgacccacatggtgaat
gccatggaccgcagttatgctgatcagagcacgctccacactgaggatcccatggccgtc
acattcatggactcccacaacttcagcaacagattgcctaatgatccacttgtgccaacg
gcagtgctagtgccaattaccgatgagaaccacactgcagctgctgcagagtccagtcgg
ctgctggacgtccctcggtaccactgtgaggggacagagtcgccctaccagaccggtcag
ctgcacccagccatcagggtggctgacctgctccaacacataaacctgatgaagacctcc
gacagctacggcttcaaggaggaatatgagagtttttttgaaggccagtccgcttcctgg
gacgtggcaaagaaagacactaacagaaccaagaaccgctatggaaacatcattgcatac
gatcattctagagtgatcctgcaaccaatggaagacgacccttcctctgactacatcaac
gccaactacattgacgtaagtggcgcagcctcctccattggcgaacgtgtgcgacacgac
cgtccttctctcatatggctgtacagggatgggtatcagaggccaagtcattacattgca
actcaagggcctgtccatgagacagtctatgatttctggaggatggtctggcaagagcag
tctgcctgtatcgtcatggtcaccaacctcgtggaagttggacgggtgaagtgttacaag
tactggcccgatgatgctgaggtctatggtgatttcaaagtgacgtttgtggaagtggag
ccccttgctgaatatgtggtcagaacgttcaccttggagaggagaggctttaatgagctg
cgcgaggtgaagcagtttcatttcaccggctggcctgaccacggagtgccctaccacgcc
acgggcctcctctccttcatccgccgggtcaagatttccaacccccccagcgctgggccc
atcgtggtgcactgcagcgccggagccggacgcacaggctgttacatcgtcatcgatatc
atgctggacatggcggagagggagggcgtggtggacatctacaactgtgtgaaggctctg
cgctccagacgcatcaacatggtacagactgaggagcagtacatcttcatccatgacgcc
atcctagaagcctgtctgtgtggcgagacggccatccctgcctgcgagtacaaagcagct
tactacgacatgatcaggatagactcacagagcaactcctcacacctcaaagatgaattc
cagacactgaactcggtgacccctcagccccagccagaggactgcagcatcgccctgctc
cccaggaaccacgagaagaaccgcttcatggacatgctgcctccagaccgctgtctgccc
ttcctcatcactatcgacggggagagcagtaactacgtcaacgctgccctcatggatagc
tacagacagccagcagccttcatcgtaacccagcaccctctgcccaacacagtcaaggac
ttctggaggctggtgtatgactacggctgcacttccctggtgatgctcaatgagattgac
ctagcgcagggctgccctcagtattggcctgaagaggggacgcttcgctacggtcctgtc
caagttgaatgcatgtcctgctccatggattgtgacgtcatcagccgtctcttcagaata
tgtaacctcactagacctcaggagggctatctgatggtgaggcagttccagtacctgggc
tgggcagcccacagagaagtcccagcgtcaaagcgttccttcctgaagctcatactgcag
gtggacaagtggcaggaggagtgtgaagagggagagggacgcacaatcatccactgccta
aacggaggtgggcacagtgggatgttctgtgctatcagcattgtgtgtgagatgatcaag
aggcagaatgtggtggacgtgttccacgcagtcaagagcctgaggaacagcaagcccaac
atggtggacagcccggatcagtaccgcttctgctacgaccttgctctggagttcatcgag
acctcttaa
DBGET
integrated database retrieval system
