Oncorhynchus gorbuscha (pink salmon): 123990716
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Entry
123990716 CDS
T07892
Symbol
polr2j
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB11-a
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03020
RNA polymerase
ogo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123990716 (polr2j)
09124 Replication and repair
03420 Nucleotide excision repair
123990716 (polr2j)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogo03021
]
123990716 (polr2j)
03400 DNA repair and recombination proteins [BR:
ogo03400
]
123990716 (polr2j)
Transcription machinery [BR:
ogo03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
123990716 (polr2j)
DNA repair and recombination proteins [BR:
ogo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
123990716 (polr2j)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
123990716
NCBI-ProteinID:
XP_046147477
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All DBs
Position
LG02:complement(83599256..83600257)
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AA seq
95 aa
AA seq
DB search
MRYCVDGITIIKDTKVPNACLFTLNKEDHTLGNIIRLQPLKDPQVLFAGYKIPHPLEHKI
VIRVXDYSPQEAFTNAITDLISELSLLEERFRVRT
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgagatattgtgtagatggaatcacaatcatcaaggacacaaaagtccctaacgcctgc
ctcttcacgttgaacaaagaggatcacacacttggcaacatcatcagactacaacctctg
aaggacccccaggtgctctttgctggctataagatccctcatcctctggagcacaagatt
gtgatccgtgttncagactacagtcctcaggaggctttcactaatgccatcactgacctc
atcagtgagctgtccttgttggaggagagatttagggtgaggacatga
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