KEGG   Oncorhynchus gorbuscha (pink salmon): 123990738
Entry
123990738         CDS       T07892                                 
Name
(RefSeq) afadin-like
  KO
K05702  afadin
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04517  IgSF CAM signaling
ogo04520  Adherens junction
ogo04530  Tight junction
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    123990738
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    123990738
   04530 Tight junction
    123990738
SSDB
Motif
Pfam: RA DIL PDZ FHA PDZ_6 RA_2 PDZ_2 RASSF8-10_RA RA_3 Yop-YscD_cpl
Other DBs
NCBI-GeneID: 123990738
NCBI-ProteinID: XP_046147515
LinkDB
Position
LG12:complement(24025552..24153804)
AA seq 1831 aa
MSGSREEERRKLADIINHWNANRLDLFEISQPTEDLEFHGVMRFYFQDRVAGNFATKCIR
VSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERKLDLDEKPLVVQLNWNKD
DREGRFVLKNENDIIPKKAQSNGPEREKEGVMQNFKRTLSKKEKKKEKKREKEAHISDGD
EQALSREDGENSRLAAEVYKDMPENSFTRTISNPEVVMKRRRQQKLEKRMQEFRSSDGRP
DSGGTLRIYADSLKPNIPYKTILLSTTDMADFAVVEALEKYGLEKENPREYCIARHTDDK
SGKEIILDDTECPLQIFRDWPNDRGDLVFQLKKRPPDYVPKKGRKPEDKGPRGKGMDVPL
HGSLPPEKLPYLVELSPGRGNHYGYYTYRHHEDGSDSRDKPKLYRLQHSVTEVGSDTTDD
GSIQLFGPGILPHHCKLMHTEGLVTVTPHSLEAETYVDGQRVTETTVLRSGATLQFGASH
VFKFVDPSYDHSMGKGGPGPMMRGRHKSGSVPETTFDLQGDLHSGTALSTSKSSGKLEME
RSSNGSERGMVKPMIRGEQQDSRSQDSLSPEVTLPASIEFRDNSEDTFLTAIINYTNSST
VHFKLSPTYVLYMTCRYVMSSHYRPDIGPSERTHKVIAIVNKMVSMMEGVIQKQKNIAGA
LAFWMANASELLNFIKQDKDLSRITLDAQDVLAHLVQMAFKYLVQCLQSDLSNYMPAFLD
DPEEQNNQRPNIEDVLHTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFNKLVMEAD
SGLCSHYWGAILRQQLSHIEAWAEKQGLELAADCHLSRIVQATTLLTMDKYSMQDVQNIH
NTCFKLNSLQLNALMTNYHCAPDEPYIPPELIDHVVAVAENTADELARSDGREVQLEEDP
DLQLPFLLPEDGYSCDVVRNIPNGFQEFLDPLCQRGFCRLTPHPRSPGTWTIHFEGVDCD
SHFSADNSDLQMRKEPEVVTVTLKKHNGMGLSIVAAKGAGQDKLGIYIKSVVKGGAADMD
GRLAAGDQLLSVDGRSLVGLSQERAAELMTRTGSVVTLEVAKQGAIYHGLATLLNQPSPM
MPRASQGGRDKNGKLRPKSEGFELYNNSVQNGSPESPQADWQAYPEPRKMSGEERLLKNR
ADHRSSPNVANQSQSPGGKAVYTRGPGTKITSVSTGNLCVDDEPSPPHPEAYPIPTQTYP
REYFTIPASKSTNRMDSAPGQIYADDRGPPGPMEDHHHNSIAMQRVDHSQEELSEDLVHL
HQQQQREADYQRGSGEHWVNHHQVSSSVESSTSSQEHLNYSSSSSNKTQSNHKSGPGRWK
TPGPIAPHPGPVAQATRTDLPPPPPPPPPVHYQDFELQPDLPLPPPPSTTQQQAAAADRK
KREEQQRWYEKEKARLEEERERKRREQERKLGQVRNPAQVPHPYLPSQGQQQAQQQQPPR
PEKLSTLPRAGTLPPQGNPMDTVIRELLPQQQPRTIERRDLQYITISKEELSSSDSLSPD
PWKRDAREKLEKQQQLHIVDLLDREIQDLQAKPERTAEESDRLRKLMLEWQFQKRLQESK
QSDEEDEEDDDEDVDTMMIMQRLEAEKRARQTAVPAISVLDLLQDEERRRKQQLEEIRKR
EAEDRAKQEEERRWREEERARREVDEKRRQEEEYYTRLEEGRRRQHEEAERKLLTPDEPG
LYRPPLPRDYQPQPPPPTASPATTATNSPPPPPQRNTSYLKTQVVSPDALYTAKFVSYND
EEDEDTTGLAGFNSYTGNTTGVVGSGEVYKDPREKWTKGGQEQENTLTEGAPESMTFKER
QRLFSQGKEVSNKVKASRKLMELENELNTKQ
NT seq 5496 nt   +upstreamnt  +downstreamnt
atgtcggggagcagggaggaggagcggcggaaactagccgatatcataaaccactggaac
gccaaccggcttgacctgttcgagatcagccaacccaccgaggacttagagttccacggc
gtgatgcgtttctacttccaggaccgcgtagcagggaactttgccaccaagtgtatccgc
gtgtcctccacggccaccactcaggatgtcatcgagacgctggccgagaagttccggccc
gacatgaggatgctctcctcgcccaaatactccctctacgaggtccatgtcagcggggaa
gaacggaagctggacctggatgagaagccactggttgtgcagctcaactggaacaaagac
gaccgcgagggacgtttcgtcctcaagaatgagaacgacatcatccccaagaaggcgcag
agcaacgggccggagagggagaaggagggggtaatgcagaacttcaaacggacactgtcc
aagaaagagaagaagaaggagaagaagcgagagaaggaggctcacatttctgacggagat
gagcaagcactgagcagagaagatggtgagaactccagactggcggcggaggtgtacaag
gacatgccggagaacagcttcacccggaccatctccaaccctgaggtggtgatgaagagg
aggcggcagcagaaactggagaagaggatgcaggagttccgcagcagcgacggcaggcca
gactcgggggggacgttgaggatctatgcagacagtctgaaacccaatatcccctataag
accatcttgctgtccacgacagacatggcagactttgctgtggtggaggctctggagaag
tacggcctggagaaagagaacccccgggagtactgcatcgccaggcacacagatgacaag
tctgggaaggagatcatcctggatgatacagagtgtcctcttcagatcttcagagactgg
cccaacgacagaggagacctagtattccagctgaagaagagacctccagactacgtgcca
aagaagggccgcaagccagaggacaagggccccagggggaagggcatggacgtgccactg
catgggtctctacccccagagaaactgccttacctggtggagctcagcccagggaggggg
aatcactatggctactacacctatcggcaccacgaagatggctcagactccagagacaaa
ccgaaactctaccgcctgcagcacagtgttactgaggtgggctcagacactacagacgac
ggctccatccagctgtttggtccaggtatcctgccccaccactgtaaactgatgcataca
gagggtttggtgacagtgacaccacacagtctggaggctgagacttacgtggacggccag
cgtgtcaccgagaccaccgtgctgcgaagcggagccacactgcagttcggcgcctcccac
gtgttcaagtttgtggaccccagctacgaccacagcatgggcaagggagggcccggacca
atgatgagaggcaggcacaagtcaggaagtgttcctgagacgacctttgacctgcaaggg
gacctccacagtgggacggccctctccaccagcaagagctcagggaagctggaaatggag
cgttcatccaacggcagcgagagaggcatggtcaaacccatgatccgcggggagcagcag
gacagcaggtcccaggacagcctgagcccagaagtgacgttgccggccagcatcgagttc
agggacaactccgaagataccttcctgacggccatcatcaactacaccaacagctccacg
gtgcacttcaagctgtccccaacctacgtgttgtacatgacctgtcgctacgtcatgtcc
agccactaccggcccgacatcggcccctcggagcgcacccacaaagtcatagccatcgtc
aacaagatggtgagcatgatggaaggagtcatccagaagcagaagaacattgcgggggcc
ctggctttctggatggccaatgcctcagagctgctcaacttcatcaagcaggacaaggat
ctgtcgcgcatcacactggacgcccaggatgtgctggcacacctcgtccagatggccttc
aagtacctggtccagtgtctgcagtctgacctgagtaactacatgcctgccttcctggac
gacccagaggaacagaacaatcaaaggcccaacatagaggatgttttgcacaccctgacg
ggcgccatgtcgctgctgcgtcgttgccgtgtcaacgcggcgctgaccatccagctgttc
tcccagctcttccacttcatcaacatgtggctgttcaacaagctggtgatggaggccgac
tctggactgtgttcacactactggggcgccatcctccggcagcagctcagccacatcgag
gcctgggcagagaaacagggcctggagctggctgctgactgccacctcagtcgcatcgta
caggctacgactctcctcaccatggacaagtactccatgcaagacgtgcagaacatccac
aacacctgcttcaagctgaactccctgcagctcaacgccctcatgaccaactaccactgt
gctcccgacgagccttacatccccccagaacttatagaccacgtggttgccgtggcggag
aacacagcagatgagctggctcgtagtgacggccgagaggtccagctagaggaggaccct
gacctgcagctgcccttcctgctgcccgaggacggctactcctgcgacgttgtgaggaac
attcccaacggattccaggagttcctggaccccctttgtcagagaggattctgtcggcta
acccctcacccgcgctcccctgggacctggaccatccactttgaaggagtcgactgcgac
agccacttctctgcagacaactcagacctgcaaatgcggaaggaaccggaagttgtgacg
gtcaccctgaagaagcacaatggcatgggcctcagcattgtggctgccaagggtgctggg
caggacaagctcgggatctacatcaagtctgttgtgaagggaggcgcggctgacatggac
gggcgtctggctgcaggggaccagctgctgagtgtggacggccgcagcctggtgggcctc
tcccaggagagggctgcggagttgatgacgaggacaggctctgtggtgacactggaggtg
gccaaacagggagccatctaccacggcctggccacgctcctcaaccagccttctcctatg
atgcccagagcgtcgcaaggagggcgtgacaagaatggtaaactgagaccaaagagcgaa
ggctttgaactgtacaacaactcggtccagaacggctctccagagagcccccaggccgac
tggcaggcctacccagaaccaaggaagatgagcggggaggaaaggctactgaagaaccgg
gccgaccaccgctccagccccaacgtggccaaccagagccagagtccgggagggaaggcc
gtctacacacgaggacctgggaccaagatcacctctgtctccacgggcaacctgtgtgtt
gacgacgagccctctcctcctcatccggaggcctatcctattcccactcagacctacccc
agggaatacttcaccatcccagcctccaagtctacgaaccggatggactcggccccagga
cagatatacgctgacgacaggggtcctcccggccccatggaagaccaccaccacaacagc
atagctatgcagcgggtggaccactctcaggaggagctgtctgaggacttggtccacctg
caccagcagcagcagagagaggctgactaccagcggggcagtggggaacactgggtcaac
caccaccaggtctcctcctctgtggagtcctccacctccagccaggagcacctcaactac
tcctcgtcctcctccaacaagacccagagcaaccacaagagtgggccgggacgctggaag
acccccggccccatcgctccccacccaggccccgtggcccaggccacacgcacggacctc
cctccccctccaccgccccctccccctgtacactaccaggactttgagctccagcccgac
ctgcccctgccccctcctccctcgaccacccagcagcaggctgccgccgccgaccgcaag
aagcgcgaggagcagcagcgctggtatgagaaggagaaggcccggttagaggaggagagg
gagaggaagaggagggagcaggagaggaagctgggacaggtccgtaacccagctcaggtg
ccccatccctacctcccctcccagggccaacagcaggcccagcagcagcagccccccagg
ccagagaaactgtccaccctgcccagagcgggcaccctgccccctcagggtaacccaatg
gacacagtgatcagagagctgctcccccagcagcagccccgcaccatcgaacgccgggac
ctacagtacatcacaatcagcaaggaggagctgtcttccagcgacagcctgtccccagac
ccctggaagagagacgcccgggagaagctggagaagcagcagcagctgcacatcgtagac
ctgctggacagggagatccaggacctgcaggccaagccggagcgtacggctgaggagagc
gaccggctcaggaagctgatgctggagtggcagttccagaagagactgcaggagtccaag
cagagtgatgaggaagatgaggaggatgacgacgaggacgtggacaccatgatgatcatg
cagcggctggaggcagagaagagagcaaggcagactgctgtcccagcaatctctgttcta
gacttgttgcaggacgaggagcggcggaggaagcaacagctggaggagatccgtaagcgc
gaagcggaggaccgggccaaacaggaggaggagagacgctggagagaggaggagagggcc
agacgagaggttgatgagaagaggaggcaggaggaggagtactacacacgtctggaggaa
gggcggcgccggcagcacgaggaggccgagcgcaagctgctgacgcctgacgagcctggt
ctgtacagacctcccctccccagggactaccagcctcagcccccccctcccactgcatcc
cccgcaaccactgccactaacagtccaccacccccgcctcagagaaacacttcctacctc
aaaacccaggtcgtctcccctgacgccttgtacactgccaagtttgtctcgtacaatgac
gaggaggatgaggacactacaggcctagcaggatttaattcatacactggaaacacaacc
ggggttgtaggatcaggagaagtttacaaggacccgcgagagaagtggacgaaaggtggt
caagaacaggaaaacactttaactgaaggagccccggagagtatgacattcaaggagcgc
cagcggcttttttcccaagggaaggaagtatccaacaaagtcaaggcctcgcgaaaactc
atggagctggaaaatgaactcaatacaaagcagtag

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