Oncorhynchus gorbuscha (pink salmon): 123990863
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Entry
123990863 CDS
T07892
Symbol
brf1b
Name
(RefSeq) BRF1 RNA polymerase III transcription initiation factor subunit b
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogo03021
]
123990863 (brf1b)
Transcription machinery [BR:
ogo03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
123990863 (brf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
RB_B
Cas12f1-like_TNB
Zn_ribbon_tTFIIB
Motif
Other DBs
NCBI-GeneID:
123990863
NCBI-ProteinID:
XP_046147757
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All DBs
Position
LG12:complement(30724411..30845820)
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AA seq
705 aa
AA seq
DB search
MTSRICKNCGCSEIDLDQARGNAVCTNCGSVLEDNIIVSEVQFVEGSGGISSAVGQFVSA
DGPVKAPVLGTGFHTSLGKESRAQTLQNGKRQIHNLGSQLQLNQHCLDTAFNFFKMVVSK
HLTRGRKMAHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYILGKTFLLLARELCINSPA
IDPCLYIPRFAHMLEFGEKTHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARMH
EFRRTVKDVIGVVKVCEATLRKRLTEFEDTPTSQLTIDEFMRVDLEQECDPPSFTAGQRK
VKMQALEQVLAKKLDEVQGEISLYRDEIETELENSRPKLRGIYAAYAKEIDPLDEVLSQA
SCSSPREVDPEEDEELEAVAQHLNQDFLCQVIQGEQQGEERGGEGVTEEAPPPHPPPRGG
PSLASILGPLPSAASLGLSESIHECIAEDKDSDGKSESGELDLDGIDDNEIERYILNDKE
VRVKTALWMKQNEEYLREQKEKEERITKEKEQGTYKEKPKKTSKKREPIRASTAGEAIEK
MLEQKKISSKINYDVLRDLNSKGGSGNSSPAQPTSTEEPPSGPPGRKRLTRRKKQPNKTN
MGLATTIMGKRLRPLISSATKKKRAASQVTPNLTPAATPVLPNLSSPPTPNPAPPGPTMV
ESGPVAYDEVAEDEEEEEVEEPCVSALQLLGGNEYGCEAEEEEVF
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgacttcccgcatatgcaagaactgtggttgttccgagatcgacctcgatcaggctcgg
ggcaatgcagtatgcacgaactgtgggtctgtgctggaggacaacatcatcgtgtccgag
gtgcaattcgtggagggcagtggtgggatttcgtcagctgtggggcaattcgtctcagca
gatggtccagtgaaagccccagtcctgggtactgggttccacaccagccttggaaaagag
tcccgtgctcagacgctgcagaacggaaagcggcagatccacaacctgggcagccagctg
cagctcaaccagcactgcttggacactgccttcaacttctttaagatggtggtgagcaag
cacctgacgcgcggacgcaagatggcgcacgtcattgccgcttgcctctacttggtctgc
cggactgagggcacgccccacatgcttctggacctgagtgatctcctacaggtgaacgtg
tacatcctagggaagaccttcctcctgctggctcgagagctctgcatcaactccccagca
atagacccttgcctgtacatccctcgtttcgcccacatgctggaatttggggagaagacc
catgaggtgtccatgactgcactgcgcctactacagaggatgaagagggactggatgcac
acgggacgcaggccctctgggctgtgtggggcagcgctgctggtggctgctcggatgcac
gagttccgccgcaccgtcaaggacgtgatcggagtggtgaaagtgtgcgaggccacactg
aggaaaagattgacagagttcgaggacactcccaccagtcagctgaccatcgatgagttc
atgcgggtggatctggagcaggagtgtgacccaccctctttcactgctggacagagaaag
gtcaagatgcaggcgcttgaacaagtgttagccaaaaagctggatgaagttcaaggtgaa
atcagtttgtatcgagacgagatcgagacggagctggaaaacagcaggccaaagctcaga
gggatctacgctgcctatgccaaagaaattgacccgctggacgaggtgctttctcaggcc
tcatgctccagccccagggaggtggaccccgaggaggacgaggagctggaggcagttgcc
caacacctgaaccaggacttcctctgccaggtcatccagggggaacagcaaggggaggaa
agagggggagaaggagtgacagaggaggcaccccctccacatccaccacccagaggaggg
ccctccctagcttccatcctgggtcccttgcctagcgcggctagcctggggctcagtgag
tccatccatgagtgcatcgcagaggacaaggacagtgatggcaagtcggagagcggggaa
ttggacctggacggcatcgacgataatgaaattgagaggtatatcctcaacgacaaagaa
gtgagagttaagacggccctgtggatgaagcagaatgaggaatatctgagggagcagaaa
gaaaaggaggaaaggataactaaagagaaagagcaagggacctacaaggaaaagcccaag
aaaacgtccaagaagcgggagcccatccgtgccagtacggcgggcgaggccatcgagaag
atgctggagcagaagaagatctccagcaagatcaactacgacgtgctgcgtgaccttaac
agcaagggtggcagcggcaacagcagccctgcccagccaacctccacggaagagccaccc
agtggcccccctgggcggaagaggctgacccgccgcaagaagcagcccaacaagaccaat
atgggcctggccaccaccatcatgggcaagagactccgtccacttatatcctctgcaacc
aagaagaagagagccgcttcacaggtgacccctaacctgaccccggctgcaacccctgtt
ctgcccaacttgtccagcccgcctacccccaacccggcccctccaggacccactatggtg
gagagtggcccggtcgcctatgacgaagtggcagaggatgaagaggaggaagaagtggag
gagccctgtgtcagtgcgttgcagctcctgggaggaaacgagtacggctgtgaggctgaa
gaggaagaggttttctag
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integrated database retrieval system
