Oncorhynchus gorbuscha (pink salmon): 123990865
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Entry
123990865 CDS
T07892
Symbol
xrcc3
Name
(RefSeq) DNA repair protein XRCC3 isoform X1
KO
K10880
DNA-repair protein XRCC3
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123990865 (xrcc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ogo03400
]
123990865 (xrcc3)
DNA repair and recombination proteins [BR:
ogo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecA family proteins
123990865 (xrcc3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rad51
AAA_25
RecA
ATPase
RNA_pol_A_CTD
Motif
Other DBs
NCBI-GeneID:
123990865
NCBI-ProteinID:
XP_046147762
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Position
LG12:30846044..30863256
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AA seq
377 aa
AA seq
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MVCMGNMDWEQLELNPRIIAAVKKANVKSAREILSLSGPDLQRLTHLSKSDVQHLHTAVA
ISYRRHSPVTALQVHRGECPSLEPGHKLSLACPVLDALLRGGVPLSGITELAGESSAGKT
QFGLQLCLSVQYPLVYGGLNSGAVYICTEDSFPIKRLRQLITQQARLRPELPQALIRSIR
FSDNIYIEHAADLGALQACVSQRVPILLSRGLVRLVVVDSVAALFRSEFQADEGIERARH
MLAFAATLHRLSHNYSTPVLCINQVTDVMDGPDPAHCNFGLVDNKVLPALGMAWANQVMV
RLMLLRLPGCVGTGEQGVTSAPRRLEVVFAPHLPRASCLCGVWEEGVRGLPNRPRSVTNS
VTKRLETTGELGLNDGT
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggtatgtatgggaaatatggattgggaacaattggagctcaacccaaggattatagca
gccgtaaagaaagctaatgtgaaatcagcgagggagattctcagtctctcgggtccggat
ctacaacgactcacccacctgtcaaagtcagacgtgcaacacctgcacacagctgttgct
atctcttaccgcagacattcacctgtaacagcattacaagtgcaccgtggagagtgtccc
tctttggaacctgggcacaagctaagtttggcttgccccgttctggacgctctactgcga
ggtggtgtaccgttgagcggcatcacagaactggcaggggagagcagtgcaggaaagacc
cagtttggcttgcagctgtgtctttctgtgcagtacccactggtgtatggagggctcaat
tcaggagctgtgtatatttgcacagaagactcgtttcccatcaagcgtctgcggcagctc
attacccagcaggctcggctgcggccagagcttccccaggccctgatacggagcatccgt
ttcagcgacaacatctatatagagcatgctgccgatctgggtgcactgcaggcctgcgtg
tcccagcgggtgcccattctgctctcccggggccttgttcggctggtggtggtggactct
gtggcggctctgttccgcagcgagttccaggcggacgagggtatcgagagagcccgccac
atgctggcctttgccgccactctccaccgcctgagtcacaactacagtaccccggtgctg
tgcatcaaccaggtgacagatgtaatggatgggccagatccagcacactgtaactttggg
ttggtggacaataaggtgctgcccgccctgggcatggcctgggccaaccaggtgatggtg
aggctgatgctgctccgcctcccgggctgtgtgggcaccggggagcagggcgttaccagc
gcccctcgcaggctggaggtggtgttcgccccccacctccccagagccagctgcctgtgt
ggggtgtgggaggaaggagtgagagggctgccaaacagaccccggtctgtcaccaacagc
gttaccaagagacttgaaaccacaggcgaattgggcctgaacgatggtacctaa
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