Oncorhynchus gorbuscha (pink salmon): 123990922
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Entry
123990922 CDS
T07892
Symbol
psmc6
Name
(RefSeq) 26S proteasome regulatory subunit 10B
KO
K03064
26S proteasome regulatory subunit T4
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
123990922 (psmc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ogo03051
]
123990922 (psmc6)
Proteasome [BR:
ogo03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
123990922 (psmc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_5
AAA_16
AAA_2
RuvB_N
AAA_22
PRS7_OB
DUF815
nSTAND3
Prot_ATP_ID_OB_N
AAA_14
AAA_7
Csa3_N
AAA_lid_PRS2_C
AAA_11
RNA_helicase
AAA_3
TIP49
AAA_18
Mg_chelatase
AAA_33
bpMoxR
AAA_24
NPHP3_N
AAA_28
DUF5906
AAA_25
DUF3829_2nd
TsaE
NACHT
Parvo_NS1
IstB_IS21
DRC7_C
AAA_17
COG4_N
GAS
ATPase
Motif
Other DBs
NCBI-GeneID:
123990922
NCBI-ProteinID:
XP_046147901
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All DBs
Position
LG12:34379913..34387388
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AA seq
389 aa
AA seq
DB search
MADTREKGLQDYRKRLLEHKEIDGRLKELREQLKEQTKQYEKSENDLKALQSVGQIVGEV
LKQLTEEKFIVKATNGPRYVVGCRRQLDKSQLKPGTRVALDMTTLTIMRYLPREVDPLVY
NMSHEDPGSISYSEIGGLAEQIRELREVIELPLTNPELFLRVGIIPPKGCLLYGPPGTGK
TLLARAVASQMDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG
RRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIH
IELPNEQARLDILKIHSGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRTDHE
YVTQEDFMKAVRKVADSKKLESKLDYKPI
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaccagagaaaagggacttcaagattacaggaaaagattacttgaacataaa
gagattgacggacgtttaaaagagttgagggaacagctcaaggaacagacaaaacaatat
gaaaaatctgaaaatgacctgaaagccttacaaagtgttggtcagattgtgggtgaagtg
ctcaaacagctgacagaggagaaattcattgtcaaggcaaccaatggaccccgctatgtt
gttggctgccgcagacaactggataaatcacagctcaaaccaggcactagagtggccctg
gacatgaccaccctcaccattatgaggtatctgcccagagaagtcgaccccctggtgtac
aacatgtcccatgaagaccctggcagtatctcctactcagagatcggtggcttggccgag
cagatccgtgaactgagagaggtgattgagctgcccctgaccaaccctgagcttttcctg
agggtggggattatccctccaaagggctgcctgctctacggacctccaggcacgggaaag
acccttctggcaagagctgtagccagtcagatggactgtaacttcctcaaggttgtgtcc
agctccattgtggataagtacattggagagagcgccaggctcatcagggagatgttcaac
tatgccagggaccaccagccctgcatcatcttcatggacgagatcgacgccatcggtggc
cgaaggttctcagagggcacgtcagctgacagagagatccagaggaccctgatggagctg
ctgaaccaaatggacggctttgacaccctgcacagagtcaagatgatcatggccaccaac
cggcctgacaccctggaccctgcactgctgcgtcccggcagactggaccgcaagatccac
attgagctgcccaatgaacaggcccgcttggacatcctgaagatccattctggccccatc
accaaacatggagaaatagattacgaagcgatcgtgaagctttcagatggcttcaacgga
gccgatttgagaaacgtgtgcactgaagcaggtatgtttgcgatccgtaccgatcacgag
tacgtcactcaagaggatttcatgaaggcggttcgcaaggttgccgactcaaagaagctt
gaatccaaactggactacaagcccatataa
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