KEGG   Oncorhynchus gorbuscha (pink salmon): 123991028
Entry
123991028         CDS       T07892                                 
Symbol
stxbp5a
Name
(RefSeq) syntaxin-binding protein 5a isoform X1
  KO
K08518  syntaxin-binding protein 5
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ogo04131]
    123991028 (stxbp5a)
Membrane trafficking [BR:ogo04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    123991028 (stxbp5a)
 SNARE
  VAMP, Ykt6, Sec22 (R)
   Tomosyn
    123991028 (stxbp5a)
SSDB
Motif
Pfam: LLGL WD40_CDC20-Fz WDR55 Beta-prop_EML_2 WD40_WDHD1_1st ANAPC4_WD40 WD40 Beta-prop_IFT140_1st WD40_Prp19 Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_NUP159_NUP214 KNTC1_N Lgl_C Beta-prop_Vps41 Beta-prop_EML Beta-prop_VPS8 CFAP43_N VPS8_N Beta-prop_WDR35_TULP_N Synaptobrevin WD40_like Beta-prop_IFT122_2nd
Other DBs
NCBI-GeneID: 123991028
NCBI-ProteinID: XP_046148109
LinkDB
Position
LG12:42409019..42583526
AA seq 1147 aa
MKKFNIRKVLDGLKEQASSSVSSGQSGTQENNLMQETLQSENFQLCKTVRHGFPYQPSSM
AHDPVQKILAIGTQSGALRLFGRPGVECYCQHESGAAVISLQFLINEGALVSALADDSVH
LWNLRQKRPAILHSLKFNRERITFVHLPFQSKWLYIGTEKGNIHIVNVESFTLSGYVIMW
NKAIELSSKAHPGPVVHISDNPMDEGKLIIGYESGIVVLWDLKSKKADYRYTYDEAIHSV
AWHHEGKQFICSHSDGTLTIWNIKGQGKPFQTITPHGKQPKDGKKPEPCKPILKVEYKTT
RLGDPFMILSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDFQEPY
AVVVLLEKDLVVIDLAQNGYPIFENPYPLTIHESPVTCCEYYADCPVDLIPALYSVGSRQ
KRQGYSKKEWPISGGNWGLGTQSYPEIIITGHADGTVKFWDASAIMLQVLYKLKTAKVFE
KSRNNKEEKQNTEIVDEDPFAIQIMAWCPESRMLCVAGVSANLIIYRFSKQEITTEVVQL
LEVRLQYEVNDMESPPEGGGGGDRDLPTPGAASPSPQTTGPLTHPSTSSNSSDGVRDNVP
CLKVRSTPLKQSPGYQVDLVVQLVWVSGEPPQQITSLALNSSYGLIVFGNSNGLAVVDYL
QKTVLLNLGTVELYGSNDPYQRQPRSPRKTRQPSGGLCDINEGSASEDRCKSPTSVLALN
HQQFYNGSGGRGAKMSRKLSLPTELKPDLVLLSVCPPRGANPLDHRDNSFSRSRSSSVTS
IDKEAREAITSFHFCETFARKGDSTITPCLYVGTSLGTVLAVALNLPPAGEQRLLQPVIV
LPSGTLGRLKGSILRMAFLDNTGTFLPPAFELWYEPNAVGADSEERDKARKRRPVSVSPS
TSQELQESQYAVVCSEKQAKVIALPSQNCIFKHSITETSFVLRADVVQMNIGNCVACFCA
NGHIMTLSLPGLRPLLDVNYLPLTDMRIARTFCFTNLGQAMYLTSPTEIQRITYSQETCE
NLQEMLGELFTPVETPEAPNRGFFKGLFGGGATSLDREELFGEMQAGKASRGLAQHIPGP
QGLEGMKGAASGVVADLARARIALDERGQKLGELDERTAAMLASADSFGKHAHDMMLKCK
DKKWYQF
NT seq 3444 nt   +upstreamnt  +downstreamnt
atgaagaagtttaacatcaggaaggtactggacggcctaaaggagcaagcgtcttcctcg
gtttcgtctggccagtcgggcacccaggagaacaatttgatgcaggagacccttcagtcc
gagaattttcaactctgcaagactgtccgtcatggcttcccctatcagccgtcgtccatg
gcccatgacccagtccagaagatcctggccattgggacccagagtggcgccctcagactg
tttggtcgtccaggtgtagagtgctactgtcaacatgagagtggagccgctgtcatctcg
ctacagtttctcatcaatgagggggcgctggtgagtgctctggcagatgacagcgtgcac
ctttggaacctgagacagaagaggcccgccatcctccactcactcaagttcaacagagag
aggatcacattcgtccacctgcccttccaaagtaaatggctgtacatcggcacagagaaa
ggaaacatccacatcgtcaacgtggagtccttcacactctcaggctacgtcatcatgtgg
aacaaagccatcgaactatcctccaaggcccacccaggtcctgtggtccacataagtgac
aaccccatggatgagggaaagcttataattggatatgagtctgggatcgtggtcttgtgg
gatctgaaatcaaagaaggcagactaccggtacacttatgacgaggcgatccactcggtt
gcctggcaccatgagggcaagcagttcatctgtagtcactcagacggaacgctcaccata
tggaacattaagggccagggcaagccatttcagacgatcaccccacacggaaaacagcct
aaggatggaaagaagccagagccttgcaaacccatcctcaaagtggagtacaagaccact
agacttggagacccatttatgatcctgtccggagggctgtcatatgacacggtgggtcgg
cggccatgtctgacggtgatgcatgggaagagtacagccgtgctggaaatggattacccc
atcgtagacttcctcacgctctgtgagacgccataccctaacgattttcaggaaccttat
gctgttgtggtccttctagaaaaggatttagtggtgattgaccttgcacaaaatggttac
cccatattcgagaacccctatccactgaccatccacgagtctcctgtgacctgctgtgag
tactatgctgactgccctgtggacctcatacccgcactttactctgttggctccagacag
aagcgacagggctacagcaaaaaggaatggcccataagtggtggtaactggggccttggc
acacagagctaccctgagatcatcatcactgggcatgctgatgggactgtgaaattttgg
gatgcttctgcaataatgctccaggtactatacaagctgaagacggccaaggtgtttgag
aagagcaggaataataaggaggaaaagcagaacacagagattgtggatgaggacccgttt
gccatccagatcatggcctggtgtcctgagagcaggatgctgtgtgtggccggggtgtct
gccaacctcatcatataccgcttcagcaagcaggagatcaccaccgaggtcgtacagctg
ttggaggtgcgtttgcagtacgaggtgaatgacatggagtcccctccagaggggggagga
gggggtgaccgtgacctgcccacccccggagcagcctcacccagcccccagaccaccgga
cccctgacacacccctccaccagcagcaactcctctgacggggtccgagacaacgtaccc
tgccttaaggtgcgtagtacccctctaaagcaatctccagggtaccaggtagatttggtg
gtgcagctggtgtgggtgagtggagagcccccccaacagatcacaagcctggccctcaac
tcctcctacggcctgattgtgtttgggaacagtaatggtctggcggtggtggactacctc
cagaagacagtgctgttgaacctggggacagtggagctgtatgggtctaacgatccctac
cagagacagcctcgctctccacgcaagacacgccagccttccggaggcctgtgtgatatc
aacgagggctctgcctcggaagaccgctgcaagtcccccacttcagtgttggcgttaaac
catcagcaattctacaatggaagtgggggtagaggagcaaagatgtcacggaaattaagc
ttgcctactgagctaaagccagacttggtcctcctgtctgtatgtcctccgcggggcgcc
aacccactagaccaccgggacaactccttcagccgttcacgctcctcctccgtcacctcc
attgacaaggaagcacgcgaggccatcacgtccttccacttctgtgagacattcgctcgg
aagggggacagcaccatcacaccctgcctgtacgtgggcacttccctgggcacagtgctg
gctgtggccctcaacttgcctcctgctggggaacagaggctactgcagcctgtcatcgtc
ttgcctagcggtaccctggggcggctgaagggcagtatcctgaggatggccttcctggac
aacacgggcaccttccttccccctgccttcgagctgtggtacgagcccaacgccgtgggc
gccgacagtgaggagcgagacaaagcccgtaaacgccgcccggtctctgtgtcgccctcc
acctcccaggagctgcaggagagtcagtatgcggtggtgtgctctgagaaacaggctaag
gtcatagcactgccctcacagaactgcatattcaaacacagcatcacagagacatcgttc
gtcctgagggctgacgtggtccagatgaacatagggaactgtgtggcctgtttctgtgct
aacggacacatcatgaccctcagtctgccggggctgagaccattgcttgatgtaaactac
ctgccgctgacagacatgcggatagcccggaccttctgcttcaccaacctgggccaggcc
atgtacctcacctcccccactgagatacagaggatcacatacagccaggagacctgcgag
aacctgcaggagatgctaggagaactattcacaccagtggagaccccggaggctcccaac
cgaggattcttcaaggggctttttgggggaggagcaacttccctggacagagaggagcta
tttggtgagatgcaggcgggtaaagcatcccgtggccttgcccagcacatcccgggtcct
cagggcctggaaggcatgaagggggcagcctcgggcgtggtggcggacctggcacgtgcc
cggatagcactggacgagagagggcagaaactgggcgagctggatgagaggacggccgcc
atgctggccagcgcagactcctttggcaaacacgcccacgatatgatgctgaagtgcaaa
gacaagaagtggtaccagttctga

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