Oncorhynchus gorbuscha (pink salmon): 123991068
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Entry
123991068 CDS
T07892
Name
(RefSeq) arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1-like isoform X1
KO
K12488
Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
123991068
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
123991068
Membrane trafficking [BR:
ogo04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
123991068
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
BAR_3
Ank_2
Ank
BAR
SH3_9
PH
SH3_1
Ank_4
SH3_2
Ank_3
Ank_5
Ferritin_2
DUF4404
Motif
Other DBs
NCBI-GeneID:
123991068
NCBI-ProteinID:
XP_046148197
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All DBs
Position
LG12:46073500..46151068
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AA seq
1145 aa
AA seq
DB search
MSQVMRSSSSRLSSFSSKDSLWNPSRMPDQISVSEFLSETTEDYNSPTTSSFTTRLQSCR
NTVNVLEEALDQDRTALQKVKKSVKAIYSSGQDHVQNEENYAQALDKFGSNFISRDNPDL
GTAFVKFSTLTKELSTLLKNLLQSLSHNVMFTLDSLLKGDLKGVKGDIKKPFDKAWKDYE
AKFTKIEKEKREHAKQHGMIRTEITGAEIAEEMEKERRLFQLQMCEYLIKVNEIKTKKGV
DLLQNLIKYYHAQCNFFQDGLKTADKLKQYIEKLAADLYNIKQTQDEEKKHLTALRDLIK
SSLQLDQKESRRDSQSKQGGYSMHQLQGNKEFGCEKKGYLMKKSDGLRKVWQRRKCSVKG
GMLTISHATSNRQPVKLNLLTCQVKPCAEDRKCFDLISHNRTYHFQAEDEPEFVIWISVL
SNSKEEALNMAFRGGEDGGGGGGGGGEDGLEDLTKAIIDDVLRSPGNEVCCDCGAADPKW
LSTNLGILTCIECSGIHREMGVHISRIQSMELDKLGTSELLLAKNVGNSSFNEIMEGNLP
CPSPKPTSSSDMTVRKEFINAKYVDHKFARKTCTSSAAKTIELCEAVKSRDLLSLIQVYA
EGVELMEPLPEGGQEAGETALHYSVRTADQTSLHLVDFLVQNSGNLDKQTEWGNTALHYC
CMYEKHECLKLLLRGKPATDITNQNGETALDVARRLKNIQCEEALLQAAAGKFYPHIHVE
YEWSLRLDEIDESDDDLDDKPSPIKKDRSPRPQSFCHASSMSPHDKLSLPGFISHRDKQQ
RMSYSAFTNQMYSASTDLTSSSSPVADAPPLPPRNQGKAPPSTLTPGGSSTLSKKKPPPP
PPGHKRTLSDPPSPLSHSRGGLSGGSDSTPPPANKMSPLSNKFEGIPQQQSTTSSITKST
LGPRVLPKLPQKVALRKIDTIHPSMDKPGLPPEVLQKSPPGPECLTKAILPDKPQLGDLL
PKPQLSELPPKPGELPPKPQLANLPPKPQLGDLPPKPQLKDLPPKPQLSQDGHPKPGAAD
LPNPRPPPGELAPKPQPPDSPVANQQAEMESPSPQGSEDTNGSPACAPETPVPLPRKINT
GKTKSRRVKTIYDCQADNDDELTFVEGEVIIVTGEEDGEWWIGHIEGQTERKGAFPMSFV
HILSE
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaagtcatgagatcctcctcttcccgtctgtcaagtttctcttctaaagattct
ttatggaatccgagtaggatgccggatcaaatatcggtgtccgagtttctctcggagaca
acagaggattacaattctcctaccacatccagcttcaccacccgcctgcagagctgtagg
aacacagtcaacgtactggaagaggctttggatcaggacaggactgcactgcagaaggtg
aagaaatcagtcaaggccatctacagctcaggccaagaccatgtccagaatgaggagaac
tatgcccaggctctagataagtttggcagcaatttcatcagcagagacaaccctgacctg
ggaacagccttcgtcaagttctccaccctgaccaaggagctgtcgaccctgctcaagaac
ctgctccagagcctgagccataatgtgatgttcaccctggactcgctgttgaagggggac
ctgaaaggcgtgaaaggggacataaagaagccctttgacaaagcctggaaggattatgaa
gctaagtttacaaagatcgagaaggaaaagagggagcatgccaagcagcatgggatgatt
cgcacggagataacaggcgcagagatcgccgaggagatggagaaggaacgccgtctcttc
caactccagatgtgtgagtatctgatcaaagtcaatgagatcaagaccaagaagggagtg
gaccttctccagaacctaatcaagtattaccacgcacagtgcaatttcttccaagatggc
ttgaagacagcggataagctgaagcagtacattgagaagctggctgctgacctctacaat
ataaagcagacccaggatgaggagaagaaacatctgactgctctcagagatctgatcaag
tcctcccttcagctggaccagaaggagtctagaagagactcccagagtaagcagggtggc
tatagcatgcaccagctgcagggcaacaaagagtttggctgtgagaagaaaggctacctg
atgaagaagagtgatgggctgaggaaggtgtggcagaggaggaagtgttcagtgaagggt
ggcatgctcaccatctctcatgccacgtccaacaggcagcctgtgaaactcaacctgctc
acctgccaggtcaagccctgcgctgaggacaggaagtgctttgatttaatttcccacaac
cggacatatcacttccaggctgaggatgaaccggagtttgtcatctggatctcggtgcta
tccaacagtaaggaggaggctctgaacatggcattccgtggaggagaggacggaggagga
ggaggaggaggaggaggagaggacggcctcgaggacctgaccaaagccatcatagatgac
gtgctgcgcagccctggcaacgaagtctgctgtgattgtggcgctgcagatccaaaatgg
ctgtccactaacctaggcatcttgacctgcatcgagtgctctggtatccaccgggagatg
ggagtgcacatctcacgcatccaatccatggagctagataaactaggcacctctgaactc
ttgctggccaagaacgtagggaacagtagtttcaatgaaataatggaggggaaccttcct
tgtccctcaccaaagcccacttcttcaagtgatatgacagtgaggaaggagttcatcaat
gctaagtatgtggaccacaagtttgcacggaagacctgtacctcctcggcagctaagacc
atcgagctgtgtgaggcggtcaagtccagggatctgctgtctctcatccaggtgtacgct
gagggggtggagctaatggagcccctgcctgagggtggacaggaggccggagagactgca
ctccactactctgtgcgcaccgctgaccagacctcactgcatctggtcgacttcctcgtg
cagaacagtgggaacctggataagcagacagagtgggggaacactgctctgcactactgc
tgcatgtacgagaaacacgaatgcctcaaactactgctgaggggcaaaccagccactgac
atcaccaatcagaatggtgagacggcactggatgttgccaggcgactgaagaacattcag
tgtgaggaggctctgttgcaggctgcagcgggcaagttttaccctcacatccacgtggag
tatgagtggagcctgaggcttgatgagatcgacgagagcgatgacgatctggatgacaag
cctagtcccatcaagaaagaccgctctcctaggccgcagagtttctgccacgcgtccagc
atgtctcctcatgacaagctgtctctgccaggcttcatcagccaccgggacaagcagcag
cgcatgtcttacagcgccttcaccaaccagatgtactccgcctccaccgacctcacttcc
tcttcctcccctgtggccgacgccccccctctgccccccaggaaccagggcaaagctcct
ccctccaccctcacccctggaggcagctccaccctgtctaagaagaagcctccgccccct
ccccctgggcacaaacgcaccctgtctgacccgcccagcccgctctcccacagtagaggg
ggcttatccgggggaagtgactccacccctcctcctgcgaataagatgtcacctttgtcc
aacaagtttgagggcattccacagcagcaaagcactacttctagcatcacaaagtctaca
cttggtccaagggttctacccaaactacctcagaaagtggcactgcgtaagatcgacacc
atacacccatctatggacaaacctggcctgcccccggaggtgctccagaaatcccctcca
ggacctgaatgcctaacaaaagccatccttcccgacaagccgcaactaggggaccttctc
cccaaaccccagctctctgaactgccccctaaacctggagaactgccccccaagccccag
ctcgccaacctccctcccaaaccccagttaggggacctaccgcccaaaccccagctcaaa
gacctaccccccaagcctcagctctcccaagacggccatccgaaaccaggggcagcagat
ctgcccaatccgagaccaccccctggagagcttgcgccgaagccccagccccccgactcc
ccggtggctaatcaacaggcagagatggagagcccgtccccccagggcagcgaggacacc
aatgggagcccagcgtgtgctccagagacaccagtgcccttgccccggaagatcaacacg
gggaagaccaaatctcggcgggtgaagacaatctatgactgtcaggctgacaacgatgac
gagctgacgtttgtggagggagaggtgatcatagtgacaggagaggaggacggggagtgg
tggatcggccacattgaagggcagacggaaaggaaaggggcattcccaatgtcctttgtc
cacatcttaagtgaatga
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integrated database retrieval system
