Oncorhynchus gorbuscha (pink salmon): 123991187
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Entry
123991187 CDS
T07892
Symbol
ptbp2a
Name
(RefSeq) polypyrimidine tract-binding protein 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogo03041
]
123991187 (ptbp2a)
Spliceosome [BR:
ogo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
123991187 (ptbp2a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
GlcNAc-1_reg
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
123991187
NCBI-ProteinID:
XP_046148457
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All DBs
Position
LG12:complement(60273185..60288839)
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AA seq
524 aa
AA seq
DB search
MDGTGDVAVGVKRGSDELLSSSLYNSGSDMSSISDGTSNGSDSKKLRVEDRMEAPPSRVL
HIRKLPNETSETEVIALGLPFGKVTNILTLKGKNQAFLELGTEEAAITMVNYYSTVTPHV
RNVPVFIQYSNHKELKTDAGNQRAQAVLQAVSAVQGGGTPTSGSDLALTAASSPVLRIII
DNMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFNDPSTAQQAKIALDGQNIYN
SCCTLRIDYSKLVNLNVKYNNDKSRDYTRPELPAGDGQPAMDPNMAAAFQGKDSNSLLGK
IPGALSPLNAAAAAAAAAGRVALSGHSGSSGVLLASNLNEEMVTPQSLFTLFGVYGDTQR
VKILYNKKDSALIQMADASQAQLAMSHLNGQKMYGKVIRVALSKHTSVQLPRDGLDDQGL
TKDFTNSPLHRFKKPGSKNFQNIFPPSTTLHLSNIPTDVTEEDLRLLFSNAGGTVNAFKF
FQDHKMALLQMSTVEEAIQGLIDLHNYNMGDNHHLRVSFSKSSI
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggacggtactggagatgttgcagttggcgtaaagagaggatcagatgagctgctgtca
agcagtctctacaacagtggctctgacatgagcagtatcagtgatggtacgtccaacggg
agtgacagtaaaaaactgagagtggaagacaggatggaggctcctccttctcgtgtgttg
cacatcagaaaactgcccaacgaaacttcagaaacggaggtcattgccctggggttacct
ttcgggaaggtcaccaatatcctgactctgaagggaaaaaaccaggctttcttggagctg
gggacagaggaagcggcaattactatggtcaactactactctactgtgacaccgcatgtt
cgtaatgtccccgtattcatccagtactccaaccacaaagaactcaaaacagacgccgga
aaccagcgggcccaggcggtcctgcaggcggtgtcagcggtccaaggaggcggtacccct
acgtcgggttcagatctggctctaacagctgcatccagccctgtgctcagaataatcatc
gacaacatgttctaccctgtcactctggatgtgctgcagcagatcttctcaaagttcggc
acggtcatgaagataatcacattcactaagaacaatcagttccaggccctgctgcagttc
aacgacccatctactgcacaacaagccaaaattgccctggatggtcagaacatctacaac
tcgtgctgtacgctccgcatcgattactccaagctggtcaacctgaatgtcaagtacaac
aacgacaagagccgtgactacacccggccagagctccccgccggggatggacagcctgcc
atggaccccaacatggctgctgcctttcaaggcaaggactccaactctctgcttggtaag
atcccaggtgcgctgagcccgctgaatgctgcggcggcggcggctgctgctgcagggagg
gtggctctgtctggtcactccggctccagcggcgtgctcctggcctccaacctcaatgaa
gagatggttacgccccaaagtctgtttactctcttcggggtctatggggacacccagagg
gtgaagattctttacaataagaaggacagtgctctgatacagatggccgatgccagtcag
gcccagctagcgatgagtcacctgaacggtcagaagatgtatgggaaggtcatcagggtg
gctctgtccaagcacacctcagtgcagctgcccagggatggactggatgaccagggcctt
accaaggacttcaccaactcccccctgcaccgcttcaagaagcccggctccaagaacttt
cagaacatcttccctccctccaccacccttcacctctccaacatcccaacggacgtaact
gaagaagacctgagactactgttctccaatgccgggggcactgtgaacgcattcaagttt
ttccaggatcacaaaatggcgctgctccagatgtcgacggtggaagaggccatccagggt
ctgatcgacctccacaactacaacatgggtgacaaccaccacctgagagtgtccttctcc
aaatcctccatctaa
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