KEGG   Oncorhynchus gorbuscha (pink salmon): 123991208
Entry
123991208         CDS       T07892                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
  KO
K12842  U2-associated protein SR140
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123991208
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ogo03041]
    123991208
Spliceosome [BR:ogo03041]
 Complex A
  U2 snRNP components
   U2 related factors
    123991208
 Complex B
    123991208
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID CTK3 RRM_7 SET_assoc
Other DBs
NCBI-GeneID: 123991208
NCBI-ProteinID: XP_046148503
LinkDB
Position
LG12:complement(62226514..62243786)
AA seq 1017 aa
MADRTPGGTQKANAKALLESKLKSFSIGKMAVSKRTLSKKEQEDIKKKEDERAAAEIYEE
FLAAFEGGEGKVKAFVRGGIANATKEEAASDDKKGKLYKPKSRFETAAAPKSSFLPLETP
PQFLTLDKRHTLKKTNEKEKKKSNLELFKEELKQIQEERDERHKMKGRVSRFEPLSGMEG
KRSSLDSSSRRNRPSSVLDDAAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPL
ASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNAKMIMNFEMKLGWGKGVPIPP
HPIYIPPSMVEHTLPPPPSGLPFNAQPCERLKNPNAALLPPPKNKEEFDKTLSQAIVKVV
IPTERNLLSLIHRMIEFVVREGPMFEAMIMNRELSNPMYRFLFENQSPAHVYYRWKLYSI
LQGEAPTKWRTDDFRMFKNGSLWHPPPLNPYLHGNFEEGEGPEEEEEEPGKKGCLKEEER
DQLEEMLRALTPRKGDIAEAMLFCLLHAEAAEEIVECVTESLSILKTPLPKKIARLYLVS
DVLYNSSAKVANASYYRKYFETKLCQVFSDLNATYKTIQGHLQSENFKQRVMSCFRAWED
WAVYPDPFLIKLQNIFLGLVNLSADKEAPAPITVEKPSVEHLAPGLLSQPEPAEDIDGAP
IGEDMDGASLEDVDGVPIGLDGGTMVDGAPLGSAPIGSVPLERAPLGMDDLDGVPIKALE
EDIDGVPLDHAAAKAASFKVAPSKWEAVDESELEAQAVTTSKWEIFEQPEEKKDEDDSDD
EDTKSSRSEEPPSYPNPIRDDLDSKTKHSEMNEDRRTKLREIEVKVMKFQDELESGKRPK
KSGQSLQEQVENYREKLLQKEKEKEKLEREKEREKKDKEKSEARSKDIKKEKEESTPTRK
DRRGLSPVVARKRRHSGSPGSPPRSSSRRVRSPSPRSERSERLYSKDVGSSRSRSSHKDS
PRTTIIKKSSKRSPSLSRTPKRSRRSRSRTPKKSTKKSRSKSRSPHRSHKKSKKSKH
NT seq 3054 nt   +upstreamnt  +downstreamnt
atggcggacagaacgcctggtggtacgcagaaagccaacgcaaaggcgctgctggagagc
aagttgaagtccttcagcattggaaaaatggccgtgagtaagaggaccctaagcaagaag
gaacaagaggatatcaaaaagaaggaggatgagcgggcagctgcagagatctatgaagag
ttcctggctgcgttcgagggaggagagggaaaggtcaaggccttcgtccgggggggcatt
gctaatgcaactaaagaggaggctgcttctgatgataagaagggcaagctgtataaacct
aagtcacgctttgaaacagcagcagcaccgaaaagcagcttcctgcctttggaaacccct
ccgcagtttttaacattagataaaagacatacactgaagaaaacaaatgaaaaggaaaag
aagaagagtaatctagagctctttaaggaagaacttaaacaaatacaggaagagcgggat
gaaagacacaagatgaaaggcagagtcagtcgatttgaacctctctccgggatggaggga
aagcgctcctcattggatagttcttcaagaagaaaccgtccgtccagtgttttggatgac
gctgcacctggttcccatgacgtcggagacccctctacaactaacttatacctcggaaac
atcaacccacagatgaatgaggaaatgctgtgccaggagtttgggcgctacggccctctg
gccagcgtgaagatcatgtggccgcggacagatgaagagagggccagggagaggaactgt
ggctttgtggccttcatgaaccggagggatgcggagagagctctgaagaatctcaacgcg
aagatgatcatgaactttgaaatgaagctgggctggggtaaaggcgtgcccatcccccct
caccccatctacatccccccgtctatggtggagcacacactccccccgccgccctccggc
ctgcccttcaacgcacagccctgtgagaggctgaagaaccccaacgccgccctgctccct
ccgcccaagaacaaggaggaattcgacaagactctgtcgcaagccatagtcaaagtggtt
atcccaacagaaaggaatttgctctctctcatccaccgaatgatcgagtttgtggtgcgt
gagggccccatgttcgaagccatgatcatgaatcgagagctcagcaaccccatgtacagg
tttctgtttgagaaccagagcccagcacacgtgtactaccgctggaaactctactccata
ctacagggagaagcaccaacaaaatggcggacggacgacttccgcatgttcaagaacggc
tcgctgtggcaccctcctcccctcaatccctacctgcacggcaattttgaggagggggag
gggcctgaggaggaagaggaggagcctgggaagaaaggctgcctaaaagaagaagagcgt
gatcagctggaggagatgttgagggctctgactcctagaaagggggacatagccgaagcc
atgctgttctgtctactgcacgccgaggctgctgaggagatcgtagagtgtgtcacagag
tccctctccatcctcaagacaccactccccaagaagattgcacggttgtatctagtctct
gatgtgctgtacaactcatctgctaaagtagccaatgcgtcgtactacagaaaatacttt
gagaccaagctttgccaggtcttctcagacctcaatgcaacgtacaagacgatacagggt
cacctgcagtctgagaactttaagcaacgagtgatgtcgtgtttccgtgcgtgggaggac
tgggccgtgtacccagatcccttcctcatcaagctgcagaacatcttcctgggtctagtc
aacctatcagctgataaggaggctcccgctcccatcacagtagagaaaccatcagttgaa
cacctggcccctggtctactgtcccagcctgagccagcagaggacatcgacggggccccc
atcggggaggatatggatggggcctctctggaggacgtggatggggtccctatagggctg
gatggagggaccatggtggacggggcccccctaggctctgcccccataggctctgtcccc
cttgaaagagccccgctggggatggatgatctggacggagtgcccatcaaggccctggag
gaggacatagacggagtgcccttggatcatgctgcggccaaagcagcatcctttaaagta
gcaccttcaaaatgggaagcagtggatgagtctgagctagaagcacaggccgtgaccacc
tctaaatgggagatctttgagcagccagaggagaagaaggacgaggatgacagtgatgat
gaggacaccaagagttcccggtcagaagagcctccgagttaccccaaccccatcagagac
gacttggactccaagaccaagcactctgagatgaatgaggacagacgcaccaagctccgg
gaaatagaggtcaaagtgatgaagttccaggatgagttggagtctgggaaaaggcccaag
aagtctggccagagtctccaagagcaggtggaaaactacagagagaaactcttacagaag
gaaaaagaaaaggagaaactggaacgagagaaagagagggagaaaaaggacaaggagaaa
agcgaagctcgctctaaagacatcaagaaggagaaggaggagtcaactccaaccaggaaa
gacaggcgtggcctgtctcctgtggttgctaggaaacggcgccacagcggctcacccggc
agccccccacggagcagcagtagacgggtgcgctccccatccccccgctccgaaaggtca
gaacgcctctactccaaggacgtagggtcatcacgatcccgctcctcccacaaagactcc
cctcgaaccaccatcatcaagaagtcctccaaaaggtctccctcgttatcccgcacgccc
aaacggtcccggaggtcacgctccagaacacccaagaaatccaccaaaaaatcccgttca
aaatcacggtccccacaccggtcccacaagaaatcaaagaagagtaaacactga

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