Oncorhynchus gorbuscha (pink salmon): 123991242
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Entry
123991242 CDS
T07892
Name
(RefSeq) nucleoporin p58/p45-like isoform X1
KO
K14307
nucleoporin p58/p45
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123991242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
123991242
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123991242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
FapA
Nup49_C
Tox-ODYAM1
PSY3
JAKMIP_CC3
PBC
Motif
Other DBs
NCBI-GeneID:
123991242
NCBI-ProteinID:
XP_046148587
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All DBs
Position
LG12:complement(64892303..64904177)
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AA seq
620 aa
AA seq
DB search
MSGFNFGSGSIGSTNAGGGFSFGAAASTPAAAGTGGFTLGGALGATAPASTTTTSSLGLG
GSLFSQKPTGGFSFNTPASGAPAASTAPTTGFSMTFNKPSASAQPFSLTAASSAPTGAGL
TLGSVLTSTAPQQGATGFSLNLGGVAASTAPSTGLSLGSSMFSNMATTGLSQSTLGGLGF
ALGLYGCQTNICMVVFVSVRVFILLIFSGLGQTTLGSGGLTLGSLASTSTAVSAAPSLGL
GGVDFSTSSEKKSDKSSGASPQDSKALKDENLPPVICQDVDNFQKFVKEQKQVHEEISRM
SSKAMLKVQDDIKSLKQLLSVSASGLQRNALAIDKLKMETAQELKNADIALRTQKTPPGL
QHDNTAPYDYFRCLVEQFEVQLQQYRQQIEELENHLTTQGSGSHITPQDLSLAMQKLYQT
FVALAAQLQSVHENVKTLKQQYLGYRRAFLEDSTDVFESKRVASKKWQSAPRITTGPAPF
SSIPNAAAVAMAATLSQQQQPGPGSQVSLGSGLGNPFALGVGSSLGTSGLGVFGGGPGFG
GVATGGSSFGFSSASKPSGGSLSAGFGSNSSSGFNFSSPGLNASAGLTFGVSNPPAAGFG
TGGPLLQLKKPPVGNKRGKR
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggctttaatttcggatccgggtctatcggttccaccaacgctggcggagggttt
tcgtttggagccgctgccagtaccccagctgcagcaggtacaggtgggtttactctgggt
ggagctctgggtgctacagccccagcctccaccaccaccacctcttctctgggcctgggc
gggtcactattctcacaaaaacctactggggggttctcctttaacactcctgcctcaggt
gccccagcagcctctacagcccctaccacgggcttcagtatgaccttcaataaaccctct
gcctcggcccaacccttctccctcactgcagcctcctcagcccccacaggggcaggactg
acactaggctcagtcctcacctccactgcgccacagcaaggagccacaggattctctctc
aacctagggggtgtggccgcaagtacagccccatccacaggtctatcgctgggttccagt
atgttctctaacatggctactactggtctgagtcagtccactcttggaggactggggttt
gcgttaggtttgtatgggtgtcagactaacatttgcatggttgtgtttgtgagtgtccgt
gtgtttattttgttaatattttcaggtttgggccagaccactctcggatcaggggggttg
acgttaggttccctggcctctacttccacggcggtgtcagcggcccccagccttggactg
ggaggagttgacttcagcacctcctcagagaagaaaagcgacaaatcatcaggggccagc
ccacaagacagtaaagctttgaaagatgaaaatttgcctccagtcatctgtcaggatgta
gacaacttccagaagtttgtgaaggagcagaagcaggttcacgaagagatcagcaggatg
tcatctaaagccatgctgaaggttcaggacgacatcaagagtctcaaacagctgctgtct
gtcagcgcttcgggactacagagaaacgccctggctatagacaaactgaagatggagact
gcgcaggagttgaagaatgcagacatagctctgcggactcagaagactccccctggactt
cagcacgacaacacagctccctatgattatttccggtgtttagtggaacagtttgaggtt
cagttgcagcagtacagacagcagatagaggaactggagaatcaccttactacacagggc
agtggatcacacatcacaccacaggatctgtcactggccatgcagaagttgtaccagacg
tttgtggctctggctgctcagctccagtcagtacacgagaacgtcaagaccctgaagcag
cagtacctgggataccgccgggccttcctggaggactccacggacgtcttcgagtccaag
cgggtggccagtaagaagtggcagagtgccccacgcatcaccactggccccgcccccttc
agcagcatccccaatgcggcggcggtcgccatggcagccacgctgagccagcagcagcag
cccggcccagggagccaggtgtccctggggtctggcttgggaaacccctttgccttggga
gtgggctctagcttgggcacctcaggtctcggagtgtttggtgggggtccaggtttcggg
ggggtagcgacggggggctcctcatttggtttctcctctgccagcaagccctcgggaggg
agcctgagtgcaggttttggaagcaacagtagttcagggtttaacttcagtagccccggc
ctcaacgcgtctgcaggcctgacgtttggcgtgtccaaccctcccgccgcgggcttcggc
actggagggccactgctgcagctcaagaagcccccggtgggaaacaagaggggcaagaga
tag
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