KEGG   Oncorhynchus gorbuscha (pink salmon): 123991368
Entry
123991368         CDS       T07892                                 
Name
(RefSeq) WD repeat-containing protein 48-like isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    123991368
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ogo03400]
    123991368
DNA repair and recombination proteins [BR:ogo03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     123991368
SSDB
Motif
Pfam: WD40_Prp19 DUF3337 WD40 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_EIPR1 ANAPC4_WD40 Beta-prop_DCAF12 WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_IP5PC_F Beta-prop_Vps41 WDR54 WD_LRWD1 WD40_RFWD3 Beta-prop_NUP159_NUP214 RAWUL WD40_like Nucleoporin_N Tfb2_C
Other DBs
NCBI-GeneID: 123991368
NCBI-ProteinID: XP_046148842
LinkDB
Position
LG12:complement(72252754..72267826)
AA seq 677 aa
MATHHRQNAAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVN
QHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMG
TVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKSLLLNRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDRKIYCTDLRNPELRMLICEEKAPVLKM
ELDRSADPPTALWVSTTKSTVNKWSLKGIHNFRASGDYDNDCTTPLTPLCTQPEQVVKGG
ASIIQCHILNDKRHILTKDTNNNVAYWDILKACKGEDLGKMEFDEEIKKRFKMVYVPNWF
SVDLKTGMLTITLDESDCFAAWVSAKDAGFSSPDGADPKLNLGGLLLQALLEYWPRTHVN
PMDEETEMNHVNGEHESRIQKGNGYFHVPPHTPVIFGEAGGRTLFRLLCRDSGGETESML
LNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEHVY
EKIINLDNESQTGASGNNDKPSEQQKEEEDVAVLAEEKIELLCQDQVLDPNMDLRTVKHF
IWKSGGDLTLHYRQKST
NT seq 2034 nt   +upstreamnt  +downstreamnt
atggcgactcatcacaggcagaatgctgctgggcggagaaaagtccaggtatcctatgtg
attagggatgaggtggagaagtataaccgcaatggggtgaacgccctgcagctcgacccg
gcattgaaccgcctcttcacagctggccgagactccatcattaggatatggagcgtcaac
cagcacaagcaggacccgtacattgcatcgatggaacaccacacggactgggtcaatgac
atcgtcctctgttgcaatgggaagacattgatatctgcttcctcagacaccacagtgaaa
gtctggaatgcgcataagggattctgcatgtccacattgcgaacacacaaggactatgtc
aaagccttagcctatgccaaggacaaggagttggtggcctcagcggggctggacagacag
atcttcctatgggacgtcaacacactaacagcactgactgcctccaataacactgtcacc
acctcctcgctgagtgggaacaaagactccatttacagtctggctatgaatcagatgggc
accgtcatagtgtcagggtccactgaaaaggtactgagagtttgggatcctcgaacctgt
gccaaactgatgaagttgaaaggccacactgacaacgtcaaatcattactgctaaacagg
gatggcactcagtgtctctcgggcagctcagacgggaccatccggttgtggtcgctgggg
cagcagcggtgcatcgccacctaccgggtgcacgatgagggtgtatgggccctacaggtc
aacgaggccttcacgcatgtctactctggtggccgtgaccgcaagatctactgcactgac
ctgaggaacccagagctccgtatgctcatctgtgaggagaaggcccccgtcctcaagatg
gagctggaccgctcagctgacccccccacggccctctgggtctccaccaccaagtccacc
gtcaacaaatggtctctgaagggcattcacaatttccgagcatctggagattacgacaac
gactgcactactcccctgacgcctctctgcacacagcccgagcaggtggttaaaggcgga
gccagcattattcagtgccacattctgaatgacaagagacatatactaaccaaagatacc
aacaacaacgttgcatactgggatattttaaaggcgtgtaaaggggaagacctgggaaag
atggagttcgacgaagagattaaaaagaggtttaaaatggtgtatgtgccaaactggttc
tctgtggatcttaagactgggatgttgaccatcacgctggatgagagtgactgctttgcc
gcgtgggtgtcggccaaggatgcaggcttctccagccctgatggggctgatcccaaattg
aacctgggtggactgctgctgcaggccttactggagtattggccccggacacacgtcaac
cctatggatgaagaaaccgagatgaaccacgtgaacggggagcatgagagcaggatacag
aaaggtaatggctacttccatgttccccctcacacgccagtcatctttggagaggcaggg
ggaaggaccctgttcaggttgttgtgtcgagactcaggtggtgaaactgagtccatgttg
ctcaacgagaccgtgccacagtgggtcattgacattaccgtggataaaaatatgcccaaa
ttcaacaaaatcccattctacctccagcctcattcttcctccggtgcaaaaaccttaaag
aaggaccgtctgtcggccagcgacatgctccaggtgaggaaggtgatggaacacgtatat
gagaagatcataaacctggacaacgagtctcagacaggggcctcggggaacaacgacaag
cccagcgagcagcagaaggaggaggaggacgtggccgtgctggccgaggagaagattgag
ctgctctgtcaggatcaggtattggatcccaacatggacctgcggacggtcaagcatttt
atctggaagagtggcggagacctaacccttcactaccggcagaagtccacgtga

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