Oncorhynchus gorbuscha (pink salmon): 123991420
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Entry
123991420 CDS
T07892
Name
(RefSeq) phenolphthiocerol/phthiocerol polyketide synthase subunit C-like
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
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Ortholog
Paralog
GFIT
Motif
Pfam:
ketoacyl-synt
KR
Acyl_transf_1
Ketoacyl-synt_C
PS-DH
KAsynt_C_assoc
PP-binding
adh_short
PKS_DH_N
CurL-like_PKS_C
ACP_SdgA_C
Thiolase_N
ADH_N
adh_short_C2
RhiE-like_linker
SAT
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
123991420
NCBI-ProteinID:
XP_046148956
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All DBs
Position
LG12:complement(78730124..78753969)
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AA seq
2100 aa
AA seq
DB search
MMGDAEEDIVVVGIGCNFPGGEGLDNFWKVLLEGKNCALQIPDERFVSSHWYDPNDNKVG
KSRTAKAALVDGFNEFDHKFFGITETEVEQMDPQQKLLLQCAYRALENAGMPMEKASGTK
TGVFIGLMNRDYEQSVGLMNPNLINHCTGTGLSMSIAANRVSYIFNFTGPSLSIDCACSS
SLVALHLACQAIRQGDCEMALCGGVNSIIQPLAFVALSKAKMISPEGTSKPFSSRADGYG
RGEGCGIILLKTLKKALKENDHVWGIISNTAVNQDGHTVTPITKPSMVQQEELLRGIYSE
SDLLSVQYIEAHGTGTPVGDPIEAGSISKVIAKARPPGPETLLIGSVKGNIGHTESAAGV
AGLIKVLLMMKHETIVPSLFYSEDSSSIDAKALNLKIPTKAEKWRDSSARVAGINNFGFG
GTNAHAIVKQHKQSNVPQKSGRKSHNLFVLSASSEKSMSMMMEDTIQQIDRDNKGDLEAL
AYTSACRRSHLKHRYRKAFRAPSLADLKDQLKSAMKKVTTPSYSDPRLVFVFCGNGVTYQ
GMCQQLLKHESVFREKIRQIEKLFQKFNNMSIIERLESESESKDLSNPDVVQPLLFATQV
GIASLFKHWGIKPDAILGHSIGEVAAAHCSGLLSLEDAVKVIYFRSTLQNTVTGGKMLVV
SNMVVSEVLNLLPSYSNKISLAAFNSPQSCTLSGDAEAIDSLHRKLSSSVKSKNLFLRVL
DVPAAYHSQMMDPILSQLEDSIGSLQVNDVETELFSTVTGKEVEQPDFSTGKYWARNIRE
TVSFEQAVRSATKGKKNVVFVEIGPRRALQRNIQETLGNDTIVLSSVQPEKDHETMLNTV
SKLFELGVQVDWDQFYRGREASPTSFPRYQFDSTRRDVIMAASKVHHTSGNHPVLTHTAS
DSNTFICDLSSDSVSYLHEHKHNGVAIIPGAFYTELGLAAFMASAKPKVPLNTLQVSISF
QSPYVFTQNAPEMKVQLEPAVDETHFKIYSPSTNHASGTITCKRGQLAEEQNISLSSIYK
RCNSVLSSEKFYTEIALGGFQYGTVFQNTGDIHYGKEFKEAFSVVTVPEELLSQLHEYCI
HPVVLDFLMQLAPVTVAYGLSSRPRFPVKIGSLTVFEPLQEEMIVYLKGIDEGVDHYEVC
GCFTDKEGRVLVELKHVVIKYLGSRSHVVEEYFFHNEFNVVCEDIISSNASEAPKALVFS
DQVGLPKAMQPHLSSQSRYISFTQSKEVLSHGFPTLLANLNITDLNKHFQEVLFVWGQED
VTSLRNEYVLESMISCCEMLRKIVLSLRAMQFTNSIRVITYRSAENTVDCINPGFVLSGM
TRSCAAEMEKLSIQLIDINSVSTEDIIALSQVLKSYPCKRYPELVVKGGLILKPDIVHTP
IGSIESTEGSIFSSMSEPCIFQTNDPCRMTSLSAIPCDVDNTNIHKKSVKIQLSKIGIHS
SDYYPVSVSELNYGQTMYWNNHTSQNHQLVALDFSGIVTAVGKDVNTLKVGDHVVSCYPI
AASSTIVIPEAACYKTKRLTFLTEAPCVSYFVLAWEILHRLLPTIKQRRRLSIIASVPDS
SLLKVLIQTANKSRWKAIVGTQCSGMFADAILLLPPFDKSLLADVSNCPDVRHVVIVCES
QSHCLLEQSVFQNVKDSVHIQTLQMSSILQKGSLIAKRPQIYNWLKSMHLGISLETSTLQ
RMSSGSIDFLSVESYFSSKTLSVVALGKDDSKGPLSNIQLLPKPTQLFQKKSVYIVTGGL
SGLGFETVKFLAQKGGEYIVILSRSSPTPDIQQEIVILERQWSARIVWMGCDVSVSEHVL
SVIGLIGQKFPSCPIKGVFHSAVVLHDGLIENLDKSHFEKVLKPKVNGALNLHHATKHCK
LDYFVCYSSISSFLGNASQTNYAAANSFLDYFCHYRRNIGLSGQSINWGALNLGLLLNKD
HLHRFLETRGLMVMDVTEIHESLEQCLLLNKPQQVVCRFHIKNMVSNVLSQNASLTVRMT
ALVDEAVQKLKFQNTQSEHTSVSSSPSEYIRSVLSQTIGVDKHELDDDSPLSALGIDSML
AMTLQNLIFQDRGVNVPLVTLLDPNRTLSTLVSMLMESTEGESENDDQKEDMTDDMLTRL
NT seq
6303 nt
NT seq
+upstream
nt +downstream
nt
atgatgggagatgctgaggaggacattgttgttgtcggcattggctgtaatttcccagga
ggagaggggcttgacaatttctggaaggttctgttggaggggaagaactgtgctttacag
attcccgatgaaaggtttgtctcttcccactggtatgaccccaatgacaacaaagttgga
aaatcgcgcacggctaaggctgcactcgtggatgggtttaatgagtttgatcacaagttc
tttggcatcactgaaacagaagtggaacaaatggacccccagcaaaaactccttcttcag
tgtgcatatagggctctggagaatgctgggatgccaatggagaaggccagtgggaccaag
acaggagtatttatagggcttatgaacagagattatgaacaatctgttggacttatgaac
ccaaatttaatcaaccactgcaccggtaccggactttctatgagtatagcagcaaacaga
gtctcatacatcttcaacttcactggaccctcactctccattgactgtgcctgctcttca
tcccttgtggctcttcatttagcttgtcaagccataagacaaggtgactgcgagatggct
ctttgtggtggcgtcaattctatcatacagccgctagcctttgtcgcgctcagcaaagca
aagatgatttcacctgaaggcaccagcaaacctttctccagcagagcggatggctatggc
agaggagagggctgtgggattattctgctgaagacactaaaaaaagctctcaaggagaat
gaccatgtatggggcatcataagcaacactgctgttaaccaagacggccacacagtcact
ccaatcaccaagccatccatggtccagcaagaggagctgctgcgtggaatctattcagag
tctgacctgttatcggtccagtacatagaggctcatgggactggaactccagtgggagat
cccatagaagcaggcagcatctccaaagtcattgccaaagccagacctccaggtccagag
acactcctcatcggctctgtgaaaggcaacattggacacactgaatctgcagctggagtg
gcagggctaatcaaggtactcctaatgatgaaacatgaaaccattgtcccttcactgttc
tactctgaggacagttccagtatagatgctaaagctttaaatttaaagatccctactaaa
gcagaaaagtggagagattccagtgcaagagttgcaggaataaacaattttggttttgga
ggaacaaatgcacatgctattgtcaaacaacacaagcagtcaaatgttcctcaaaaaagt
ggtaggaaatcacacaatttatttgtcctctctgccagttctgaaaagtctatgagtatg
atgatggaggacacaattcaacagatagacagagacaacaaaggtgatctagaagctctt
gcatacacatctgcatgtagaagaagccacttgaaacatcgatatcggaaagcattcaga
gctccctctctggctgatcttaaagatcaactcaaatctgccatgaaaaaggtaaccacg
ccgtcttactcagatcccaggctagtgtttgtcttctgtgggaacggtgtaacctatcaa
ggcatgtgccagcagctcttgaaacatgagtctgtgttcagagagaagatcagacaaatt
gagaagcttttccagaagttcaataacatgagtatcatagagagacttgagagtgaatca
gagagtaaagatctttcaaacccagatgttgtccagcccctcctctttgccactcaggtt
ggcatagccagtctcttcaagcactggggcatcaaacctgatgccattcttggccactct
ataggagaggttgctgctgcccactgctctggtctgttgtcccttgaggatgcagtgaag
gtgatctacttccgcagtactctgcagaatacggtcacaggagggaaaatgcttgtggtc
agtaacatggtcgtatcagaggtcttgaatctccttccctcttactcaaataagatttcc
ttggctgccttcaacagcccacagtcctgcacgctctcaggtgatgcagaggctatagac
agtctccatcgaaagctgagcagctcagtcaagagtaagaatctgttcctccgggttttg
gatgtccctgctgcataccacagccagatgatggatcccatcctgtctcaactagaggac
agtattggctctttacaagtcaatgatgttgagacagaattgttctccacagtaacagga
aaggaggtagagcagccagacttcagcacaggcaaatactgggccaggaacatacgagag
acagtttcatttgaacaggcagtgagatctgcaaccaaagggaaaaagaatgtagtcttt
gtggagattggccctagaagggctctacaaagaaacatccaggagactcttggaaatgac
accatagttctgtcctcagtgcagccagaaaaagatcatgagacaatgctgaatactgta
tccaaactgtttgagttgggggttcaggtagactgggatcagttctacagaggccgtgag
gcttcaccaacatctttcccaaggtatcagtttgattctactcggagagatgttatcatg
gctgcatcaaaggtacatcacacatcaggtaatcatcctgtgctaactcatacagctagc
gatagcaataccttcatttgtgatctgtcttctgactcagtatcctacctgcatgagcat
aaacacaatggcgttgccataatccccggtgccttctatactgagttgggtttggctgcc
ttcatggccagtgccaaaccaaaggttccactcaacacactgcaagtcagtatcagtttt
cagagtccctatgttttcacacagaatgcaccagagatgaaagtgcaacttgaaccagca
gtggatgagacccattttaagatatattctccctccacaaaccatgcatcaggcacaata
acgtgcaagcgaggacagctagctgaagaacagaacatttcgctaagctcaatctacaaa
agatgcaattcagtgttgagttctgaaaagttctacactgaaattgctctgggtgggttt
cagtatggcactgttttccagaacacgggggatatacactatggtaaagagtttaaggag
gcgttttcagttgtcacagttccagaagaattgctgtctcagttgcatgaatactgcatt
caccccgtagtgttagacttcctgatgcaacttgctcctgttacagtagcatatggactc
tcttcaaggcccaggtttcctgtcaaaataggcagcttgacagtgtttgaacctctgcaa
gaggaaatgattgtgtatctgaaaggaattgatgaaggtgttgatcactatgaagtatgt
ggttgctttacagacaaagagggaagagttttggttgagcttaagcatgtggtgattaaa
tatcttgggagccgctctcatgttgtggaagaatacttcttccacaatgaattcaatgtt
gtctgtgaggatatcatctcctctaatgccagcgaggcaccaaaggccttggtattttcc
gaccaggtaggccttccaaaagccatgcaaccacacttaagttcacagtctagatacatc
tccttcacacaatctaaggaggtcttgagccatggattccctacactcctggcaaacctt
aatatcacagatctcaacaaacacttccaggaagtgttatttgtgtggggccaggaagat
gttacttcactgagaaatgagtatgttctggagagtatgataagctgctgtgagatgctc
aggaaaattgtcctgtcattgagggccatgcaatttacaaattccatcagagtaataacc
taccggtcggcggagaacacggtggactgtatcaacccaggctttgtcctgtcaggcatg
actagatcgtgtgctgcagaaatggaaaagctttccatccagctgattgacatcaactct
gtctctacagaagacatcatagctctgtctcaggtcttaaagtcatacccttgcaaaaga
tacccagagttggttgtgaaaggtgggctgattttgaaacctgatattgtacatactccc
attggaagcattgagagcactgagggaagtattttctcttcaatgtctgagccatgcatc
tttcagacaaatgacccatgcagaatgactagcttgtctgccattccttgtgatgttgac
aatacaaacatccataagaaatcagttaagattcagctcagtaagataggtattcattcc
tcagactactatcctgtcagtgtctctgagctgaactatggtcagacaatgtactggaac
aatcacacatctcagaaccaccagcttgtggctcttgacttcagtggtattgtcacagct
gtagggaaagatgtgaacacactgaaagtgggagaccatgtagtatcatgttatcccatt
gctgcatcttctacgattgtgattcctgaagcagcatgctacaagacaaagaggctcaca
tttctgacggaggctccttgtgtgtcctactttgttctggcatgggagatactgcacaga
ctgttacctaccatcaaacaacggagaaggttgagcatcatcgcctctgttcctgactct
agtttgctgaaggtcctaatccagacagcaaacaaatcaagatggaaagccattgtaggg
acacagtgcagtggaatgtttgctgatgcaattctcctccttccaccatttgataaatct
ctgttggcagacgtcagcaattgtcctgatgtcagacatgttgtcattgtctgtgaatcc
cagtcccactgcttgcttgaacagagtgttttccagaatgttaaggatagtgttcacatc
cagactcttcaaatgtccagcatcttacaaaagggatcactcattgccaagaggccacag
atttataattggctaaagtccatgcatttgggaatttctttagagacctctaccttacag
agaatgtcatccggtagcattgacttcctgtctgttgagtcgtacttcagctcaaagacc
ctgtctgttgtggcgctgggtaaagatgattccaaaggcccactgtccaacattcagttg
ctgcctaaaccaacccagctattccagaagaagtctgtgtacattgtcacaggtggtctc
tctgggctggggtttgaaacagtgaagttccttgctcagaaaggtggagagtacatcgtc
atactctccagaagtagccccacaccagacatacagcaggagatagtcattctggagaga
caatggagtgcccgtattgtatggatgggatgtgatgtctctgtctctgagcatgtgctc
agtgtgattggtctcattggtcagaagtttccctcttgtccaatcaaaggggtgtttcac
agtgcagtcgtcctgcatgatggattgattgaaaaccttgacaaatcccactttgagaaa
gtcctaaagcccaaggtgaatggagctctgaatctacaccacgccacaaaacactgcaag
ttagactactttgtgtgctactcttccatctcttctttccttggcaatgcctcacaaaca
aactatgcagcagccaattcattcctggactacttctgtcactatagacggaatattgga
ctatctgggcaatccatcaactggggagctttgaaccttggtctcctgcttaacaaggat
catttacacaggtttctggagacaaggggattgatggtgatggatgttacagagattcat
gagagtttggaacaatgcctcttgctaaacaaaccccaacaggttgtatgtaggtttcac
atcaagaacatggtgagcaatgttctctctcaaaatgcatcattgaccgtgcgtatgact
gcattagtggatgaggcagtgcaaaaactcaaattccaaaatacacagtctgaacatact
tctgtgtcatcttccccaagtgaatacatcaggtctgtactcagtcaaacaattggtgtt
gacaagcatgagttagatgacgattctcctctctctgccttaggcatcgactcaatgcta
gccatgaccctgcagaacctcatctttcaggataggggtgtgaatgtgcctctggttaca
ttgctggaccccaataggacactgtctacattggtatcaatgctgatggagagtactgag
ggtgaatctgagaatgatgatcagaaagaggacatgacagatgacatgttgacaagacta
tag
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integrated database retrieval system
