Oncorhynchus gorbuscha (pink salmon): 123991421
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Entry
123991421 CDS
T07892
Name
(RefSeq) ATP-dependent zinc metalloprotease YME1L1-like isoform X1
KO
K08955
ATP-dependent metalloprotease [EC:3.4.24.-]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ogo01002
]
123991421
Peptidases and inhibitors [BR:
ogo01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
123991421
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
AAA_16
AAA_5
AAA_22
TIP49
RuvB_N
DUF815
IstB_IS21
Mg_chelatase
AAA_28
AAA_33
AAA_14
PhoH
AAA_25
AAA_18
nSTAND3
AAA_17
Motif
Other DBs
NCBI-GeneID:
123991421
NCBI-ProteinID:
XP_046148957
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All DBs
Position
LG12:complement(78780828..78804067)
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AA seq
737 aa
AA seq
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MLSFSASLQPQVTSQLIGQLINALHSLKNSASSTATASVQSLQTHVTPEQDLLLIEDLGL
SEQRVREPTVILRDLGLSDLRVGQLDELVNRLLPAPGSEEGPAASIWRTSHVSADSFLQN
KHGLSNGRFGVFGLPMFHRPNQSPLHAICSELQYWPVRVQNRGFKTLRKSKRVESGYQGL
AEPEGYTSAFMKGLLMRPDKSPEAQSLDHVVKQKNLQGDQQDAFKSGFTEGFMRSQAFTQ
RTHDSLRRTRLILLVLLVVGIYGLSRSPFLSGKGSFSDAVRFRTTSGLDSQVDPVQVKSV
TFEHVKGVEEAKNELQDVVEFLRNPQKFTVLGGKLPKGILLIGPPGTGKTLLARAVAGEA
DVPFFYASGSEFDEMFVGVGASRIRNLFKEAKANAPCVVFIDELDSVGGKRIESPMHPYS
RQTINQLLAEMDGFKPNEGVIVIGATNFAEALDNALVRPGRFDMQVTVPRPDVKGRTEIL
NWYLQKIKVDPNVNAAIIARGTVGFTGAELENLVNQAALKAAVDGLDQVTMKELEFSKDK
ILMGPERRSVDIDKKNKQITAYHESGHAIVAYYTKDAMPINKATIMPRGPTLGHVSMLPE
NDRWSETRAQLLAQMDVSMGGRVAEELIFGDDYITTGASSDFDGATRIAKMMVTRFGMSD
KLGVMTYAEVTKQSPETQAAIEQEVRVLLKDSYERAKNLLKTYSDEHKTLAEALLTYETL
DAKEIKLVLEGKALDPR
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgttgtccttctcggcgtctctccagccacaggtaacgagtcaactcattggccaactc
atcaatgccctccattccctgaagaactcagccagctccacagccacagcttctgtccag
agcctgcagacacacgtcacaccagagcaggacctgttgctcatagaggacctgggtcta
tcagaacagagggtgcgtgagcccaccgtgatcctccgggacctgggcttatcagacctg
agggtgggtcagctggatgagctggtgaacaggttactgcccgcaccgggctcagaggag
ggcccagctgcttcaatatggaggacgtcccacgtctctgcggactctttcttacaaaac
aaacacgggttgtcaaacggaaggtttggtgtttttggcttgccaatgttccacagacca
aaccagagtcctctacacgccatctgttcagagctccaatactggcctgtaagggtccag
aaccgaggcttcaagactctgaggaagagcaagcgcgtggagtctggttaccaggggctg
gcagaaccagagggttacacttcagcattcatgaagggtctcctcatgagacccgacaag
tccccagaggcacagagtctggatcacgtggtaaagcagaagaacctgcaaggtgaccaa
caagatgccttcaagtctggtttcaccgagggcttcatgaggtcccaggccttcactcag
aggacacacgactcgctaaggaggaccaggctgattctattggtcctcctcgttgtggga
atctatggcctgtcaagaagcccgtttctttcgggtaaagggtccttttctgatgctgtg
aggttccgtaccacgtcaggcctggactcgcaagtggacccggttcaggtgaagagcgtc
acctttgagcacgtcaagggggtagaggaggccaagaatgaactgcaagacgtggtggaa
ttcctcagaaacccccagaagttcaccgtgctcggagggaagctccctaaaggcatcctc
ctgattggccccccaggcacaggaaagactctcctggctcgggctgtagccggggaggcc
gacgtccccttcttctacgcatcgggatcagagtttgacgagatgtttgtgggtgtcgga
gctagccgcatcagaaacctcttcaaagaggcgaaagccaacgcaccttgtgttgtcttc
attgatgagcttgacagcgtgggaggaaagaggatcgagtctcccatgcacccctactcc
agacagaccatcaaccagctactggcagagatggacgggttcaaaccaaacgaaggggtc
atcgttatcggcgctacaaactttgctgaggctttggataatgccctggtacgtccgggg
aggtttgacatgcaagtgaccgtccctcgtccggacgtgaaaggacgtacggagatcctc
aactggtacctgcagaagatcaaagtggatcccaacgtgaacgcggcgatcattgccagg
gggacggtgggcttcacgggggcggagctggagaacctggtgaaccaggcagccctgaag
gcagctgtggacggcctcgaccaggtcaccatgaaggaactggagttctccaaggacaag
atcctcatgggtcctgagcgcaggagtgtggacattgataagaagaacaagcaaatcaca
gcctaccacgagtcaggccacgccattgtggcctattacaccaaagacgccatgcccatc
aacaaggcaaccatcatgcccagaggacccactcttggccatgtgtccatgctcccagag
aatgaccgttggagtgagacgcgggctcagctcctggcccagatggacgtcagcatggga
ggtcgcgtggccgaggagctcatctttggcgacgattacatcacgactggagcgtcaagc
gactttgacggggcgaccagaatagccaagatgatggtgaccaggttcggaatgagtgac
aagcttggtgtcatgacctatgctgaagtaaccaaacagagccctgagacgcaggcagcc
atcgaacaggaagtcagggtcctgctcaaggactcgtatgagcgagccaaaaacctcttg
aagacctacagcgatgagcacaagacgctggccgaggctctgctaacgtacgaaactctg
gatgccaaagagatcaagctggtcctagagggcaaggccctggaccctagatga
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