Oncorhynchus gorbuscha (pink salmon): 123991458
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Entry
123991458 CDS
T07892
Symbol
gars1
Name
(RefSeq) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
123991458 (gars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ogo01007
]
123991458 (gars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ogo03016
]
123991458 (gars1)
03029 Mitochondrial biogenesis [BR:
ogo03029
]
123991458 (gars1)
Enzymes [BR:
ogo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
123991458 (gars1)
Amino acid related enzymes [BR:
ogo01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
123991458 (gars1)
Transfer RNA biogenesis [BR:
ogo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
123991458 (gars1)
Mitochondrial biogenesis [BR:
ogo03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
123991458 (gars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
WHEP-TRS
OS-D
Motif
Other DBs
NCBI-GeneID:
123991458
NCBI-ProteinID:
XP_046149029
LinkDB
All DBs
Position
LG12:85057214..85082845
Genome browser
AA seq
748 aa
AA seq
DB search
MLRSATSALLRTSIEIRTLRSVPRVCRFLQSLLRCPTQNSSFSLSVCLCKKKKSLWLELS
EGHKMSGNIEEILAPLRLAVKEQGELVRQMKQDGAPDVDVLKAVAELKARKRTLETKELS
LQPKDDIVDRTKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNILQAWRQHFIQ
EEQILEIDCTMLTPEPVLKTSGHVDKFADYMVKDVKNGECFRADHLLKAHLQKLMSDKKC
PAENKAEMEEVVTQMDNYTQQELTDLFVKYSVKSPTTGNDVSAPHLFNLMFQTSIGPGGN
MTGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEI
EHFVDPTEKFHPKFPNVADLEIILYSSKAQTSGQSAHIMRLGDAVEQGVINNSVLGYFIG
RIYLYLTKVGVAKDKLRFRQHMDNEMAHYACDCWDAETKTSYGWIEIVGCADRSCFDLLC
HARATKVPLVAEKPLKEPKVVDIVQFEPNKGAIGKAYKKDAKLAMEYLAVCDECFITEQE
MLLNSSGEFTIEAEGKTFKLTKDMVSVKRFQKTLHVEEVVPNVIEPSFGIGRIMYSIFEH
TFQVREGDEQRTFFSFPTTVAPYKCSVLPLSQNQEFMPFVKELSEAMTKQGVSHKVDDSS
GSIGRRYARTDEIGVAFGITIDFDTVNKTPHTATLRDRDSMRQIRAEVSELPGIIRDLAN
GFMTWAEVESKYPIFEGQETSKKDTAEE
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgtagcgcgacatcagcactgctgaggaccagcattgagattcgcactcttcgc
tcggtgccgagggtctgccggtttctacagtcgctgctgcgctgtccgacccaaaacagc
tcgttttctctgtcggtctgcttgtgtaagaaaaagaaaagtctttggctggagctttcc
gaaggacacaaaatgagtggcaatattgaagaaatcctcgccccactgaggctggcagtg
aaagaacagggtgagctggtgcgccagatgaaacaggatggtgcccctgatgttgacgtc
cttaaagctgtggctgaactgaaagctaggaagagaactctggaaactaaggaactgtct
ctgcagcccaaagatgacattgttgacagaaccaagatggaggatacgttgaagaggaga
ttcttctatgaccaggccttcgctatctatggaggtgtgagtggtctgtatgactttggc
cctgtgggctgtgccctgaagaacaacatcttgcaggcctggaggcagcacttcatccag
gaggagcagatcctggagatcgactgcaccatgctcaccccggagcctgttctcaagacg
tctggacacgtggacaagtttgcggactacatggtgaaagacgtgaagaacggagagtgt
ttcagggcagaccacctcctcaaagctcacctccagaagctgatgtctgataagaagtgt
cctgcagagaataaggccgagatggaggaagtggtcactcagatggacaactacactcaa
caggagttgactgacctctttgtgaaatacagtgtcaagtcccccaccacaggaaatgac
gtttcagcccctcatctcttcaacctgatgttccagacgtctatcggaccagggggaaac
atgacaggctacttgaggcctgaaacggctcagggaatcttcctcaacttcaagcgtctg
ttggaattcaaccagggaaagcttcccttcgctgctgctcagatcggcaactccttcagg
aacgagatctcacctcgctcaggactcatccgtgtcagagagttcaccatggctgagatt
gagcactttgtggacccgactgagaagttccaccccaagttccctaacgtggctgacctg
gagatcatcctgtactcctccaaggcccagaccagtggccagtctgctcacatcatgagg
ctgggggatgctgtggagcagggggtgatcaataactccgtcctgggatatttcatcggg
agaatctacctctacctcactaaagtgggtgtggccaaagacaagcttcgcttccgtcag
cacatggacaacgagatggcccactacgcctgtgactgctgggacgcagagaccaaaaca
tcctatggctggattgagatagtgggctgtgcggaccgctcctgtttcgacctgctgtgc
cacgcccgggctaccaaggtccctctagtggccgagaagcctcttaaagaacccaaagta
gtcgatatcgtccagtttgagcccaataagggagccatcggtaaagcctataagaaggac
gccaaactagcgatggagtacctagctgtctgtgacgagtgtttcatcactgaacaggag
atgctgctcaacagcagcggggagttcaccatagaggcggagggaaagacttttaaactc
accaaggacatggtcagtgtgaagcggtttcagaagaccctgcatgtggaggaggtggtc
cctaatgtcatcgaaccctcctttggcatcggtagaatcatgtactcaatcttcgagcac
acattccaagtcagagagggcgacgaacagagaacgttcttcagcttccctaccactgta
gctccatataaatgctccgtccttcctttgagccaaaaccaggaattcatgccttttgtt
aaggaactctctgaagcgatgaccaaacagggcgtgtcccacaaggtggacgactcgtca
ggatccattgggcggcgctacgccagaacagatgagatcggagtggcgttcggcatcacc
atcgactttgacacggtgaacaagactccccacaccgccactctgagggaccgcgactcc
atgaggcagatcagggccgaggttagtgagttgccaggaatcatccgtgatctggcaaac
ggtttcatgacttgggccgaggtggagagcaagtaccccatctttgagggacaggagacc
agcaagaaggacactgccgaggaatga
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