Oncorhynchus gorbuscha (pink salmon): 123991480
Help
Entry
123991480 CDS
T07892
Symbol
rp1l1b
Name
(RefSeq) retinitis pigmentosa 1-like 1 protein
KO
K19538
retinitis pigmentosa 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ogo03037
]
123991480 (rp1l1b)
04812 Cytoskeleton proteins [BR:
ogo04812
]
123991480 (rp1l1b)
Cilium and associated proteins [BR:
ogo03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
123991480 (rp1l1b)
Cytoskeleton proteins [BR:
ogo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
123991480 (rp1l1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4838
Motif
Other DBs
NCBI-GeneID:
123991480
NCBI-ProteinID:
XP_046149055
LinkDB
All DBs
Position
LG12:4474030..4480935
Genome browser
AA seq
2033 aa
AA seq
DB search
MSNVSSHLQVKGQKDKNNKDDAKSDKGSDISRKTNRSNKTATRDHVDTPRPESCLTPSPP
ECPPTPRKIKRPVILLGGSSDSNKSHAAYPVEENSNISCNGPLEVTDRNVSDNRSDKSGK
CKQRKGVPLLSFSRQLLEGEVSELVPSNLPNASPTEVVNEWLKKIPSDSAMYDIGDEFID
RGHSPEELPQKEKTKQDIDTIAECETQNEKKEELKETVVNHVADSEEPVETPPETPPETP
PETPPEDTHSCTAPQEEVSKSFHSSVQVMKVLLNPKLDRCNSLPEVSPVYGRKLSTSARG
LLDCLAKLQLIDFDPNYDANAKDTRYRELMNILQSLWLCDPAEGGKSQQNGCDQHSVDGD
GKARSSSGVDVSSGSTGSGKSSGRVAQATNAEGEALVKVQEVDEMAQKDESLESSAPMSD
TATPDIASRVQWTPEEGGEGAIAVEEEKQKDEDVPESDDTIRNESLRELPETPPSSNKSS
DPREDTSSGSPPSVQRAQLAKKVSLDPDPVWVLKLLNKLEKQFMTHYVDAMAEFKVRWNL
DNNEQLNAMIAELKDDVRRRIQLSIDRELRKIHGRAGRPRPPKEALSRESNAQTETRRRR
LKVVRDQSIDNRVDKSEDATCTSFSDQRSDDEYCPCEACLQKKLELGPLLPAEVLHTAPV
MMAFDLKSILQLKREPTPKTQEADVTDDTETVVVKAGIAHAFDLKSIILQSKKDSPPQIQ
VEVNVADETEGMDEAKAAETLVENVINGAKKEMKESQQKDAEMGDKAETAESDVEVTAEG
EAIEEGEAETDTAEDEEETEEAETAAEEAEGKEVDAESKNTEAEIEEAEESGKAEAAVCC
EAREEEEVEAETAEDEILEEETSEAETAANNEAAGEEEEAEAETAEAETAEDEAGEEETA
EGETVADDETAGEEEAAEEDTAGEEEVEAETAEAETAEDEAGEKETAEGETVADDETAGE
EEAAEEDTAGEEEVEAETAEAETAEDEAGEEETAEGETVADDETAGEEEAAEEDSAGEEE
VEAETAEAETAEDEAGEEETAEGETVADDETAGEEEAAEEDSAGEEEVEAETAEAETAED
EAGEEETAEEETVADDETAGEEEAAEEDTAGEEEVEAETAEAEIAEDEAGEEETAEGETV
ADDETAGEEEAAEEDSAGEEEVEAETGKDEDAEEETDKVIAAGSTPGEEESTEAADNKML
GKEESEAETAEAETADVTAEEDETAEVEAAEEETAGDEESAEAETAGDEAGEEETAEAES
TDDGTAGDETAEVESAQEETAGDEESAEAETSGDEAGEEETAEAETADDGARGEETAEVD
TAEGKNAGEEESAEAETAGDETAKEEEDAEVETADEETAEAETVENETVEGEEDAESEAA
EEEAARDEDTVEAEAETNDDAAGEEEISKAETADGETSGEDETTGHESSENETTGDESAE
IETTGDESAPAETAGEGTADDETAGEEENAEAETAGEEESAEAETAEGEEQTAGDETGRD
ENENVGEESSEAEAFEDEAASKRAEENVEKGEDETAEDKEPVVESNIEETDCHDDVSEIK
ADDEAEEGETTDQDMVPEETGTEQEDDTNAGDNVGNEAEEAKTNKLNAENGTQDQAENVV
GGSEKDEEVETTEGNETANEEDSCGNVGYSADGEDEAEDESELEISTDEGEQSEVPAIGE
DSMKETVEETPMTSFDALARAEYSEDSAYADVEDSETDGNNEESEAQEDKPEEEEGDISA
EGQAELHVEETPVEELQDEEKEEETPVEETPVEELQEEAEEEAEEMEEVEMEEVEETPIE
ELKEEAEEEQAEVEEEAEEMEEVEMEEVEETLIEELKEEAEEEQAEVEEEAEEDATEDDA
AEEQQEAADEETTENEASDEEEQEEGVDEPEAKEIEEAEEDTAENDDAVEEDPADEGDDI
TSKGQSEDDSDSGGPSGTSNKSLRGQPTKSSMESQPGSLDKVLDEEAASSQIGSGERLGH
HLSVKSNQMYPTDTEDESRVSECTEAVSEVLERQVVHPKKKTPKKTPKKTPKK
NT seq
6102 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgtgtcttcccatctacaagtcaaaggacaaaaggacaaaaacaataaggat
gacgccaaaagtgacaaagggagtgacatttcaagaaagacaaacaggtcaaataagact
gccactagagatcatgtggacactcccagaccagagagttgtctcactccttccccacca
gagtgcccaccaacccccagaaaaatcaaacgacctgttattttacttggtggctcgagt
gacagtaataagtcacatgcagcatatccagtggaagagaactctaacatctcatgcaat
ggccccttggaagtgacagacaggaatgtcagcgacaacagaagtgacaagagtggcaag
tgcaaacagaggaaaggggttcccttactcagtttctcccgacagttgctggaaggagaa
gtctctgagctggttccctccaatctaccaaacgcctctccaacagaggtggtgaatgag
tggcttaagaaaataccgtctgacagtgcgatgtacgacattggggatgaattcattgac
agaggccattcaccagaagaactaccgcaaaaggaaaaaacaaaacaggatattgacacc
attgctgagtgtgaaactcaaaacgaaaaaaaggaagagctcaaagagacagtggtcaac
catgtggctgacagtgaggagccagtggagaccccaccagagaccccaccagagacccca
ccagagaccccaccagaagacactcactcctgcaccgctccacaggaagaggtatcaaag
agctttcactcctcagttcaggtgatgaaagtcctgttgaatcccaagcttgaccggtgt
aacagtttacctgaagtttccccagtgtacggacgtaaactgagcacctcagccagaggt
ctcctggattgcctcgcaaagctgcagttgatagactttgatcccaactacgatgcaaac
gccaaggacacaaggtacagagagctaatgaacatcctccagtccctctggttgtgtgac
ccagcagaaggtggaaagtcacagcagaatggctgtgatcaacactctgtggacggtgat
gggaaagcaaggtcctcctctggggtggatgtcagcagtggctcaacaggctcaggtaag
agttcaggccgtgtggctcaggcaacgaacgcagagggggaagcgttggtgaaggtacaa
gaagttgatgaaatggcacagaaagatgaaagcctagagtcctcagcaccaatgtctgat
acagctactccggacatagccagtcgggtccaatggacccccgaagaaggaggagaagga
gcaatagcagtggaggaagagaaacaaaaagatgaagacgtcccggagtctgatgacacc
attagaaatgaaagtctgagagaattaccagaaacgcccccgtcttccaataagagctca
gaccctcgagaggacacaagctctggctctcctccatctgtccaaagggcacaactagcc
aaaaaggtttccctggatcctgatcctgtctgggtcttgaagttactgaacaaactagag
aagcagttcatgacacattatgtggatgccatggctgagttcaaggttcgctggaacttg
gacaacaacgaacagctcaatgccatgatagctgaactgaaagacgatgtgaggaggaga
atacaactaagcatcgacagggaactgaggaagatccacggtcgggctggaagaccaaga
ccacccaaagaagccttgtcacgagaatcaaatgcacaaacagagacaaggcgaagaaga
ctgaaagttgtgcgtgaccagtccattgataaccgggttgataaaagtgaggatgcaacc
tgcacttccttcagtgaccaacggagtgatgatgaatattgcccttgtgaagcatgttta
caaaagaaactggaattaggaccactgcttcctgcagaagtcctgcatactgcaccagtc
atgatggcttttgatctaaagtcaattcttcagttgaaaagggaacctactccaaagaca
caagaagctgatgttacagatgacactgaaacggtggtagtgaaagctggcattgcacat
gcttttgatttaaaatcaataattctccagtcgaaaaaggacagtccaccacagatacaa
gtagaagtcaatgttgcagatgagactgaaggtatggatgaagccaaagcagcggaaact
cttgttgaaaatgttatcaatggggctaagaaggagatgaaggaatcacaacaaaaagat
gctgaaatgggtgacaaagctgagacagcagaatctgatgtagaagtgacagctgaaggt
gaagcaatcgaagagggggaagctgaaacagatactgctgaagatgaagaagaaactgag
gaagctgagacagcagctgaggaagcagagggaaaggaggtggatgctgaatcaaagaat
actgaagctgagatagaagaagcagaagagagtggtaaagcagaggcagcagtgtgttgt
gaagccagggaagaggaggaagtcgaagcagagacagctgaagatgaaatattggaagaa
gaaacttctgaagcagaaacagcagctaataatgaagcagcaggagaagaagaggaagct
gaagcagaaacagcagaagctgagacagcagaagatgaagcgggagaagaagaaactgct
gaaggagagacagtagctgatgacgaaacagcaggagaagaagaggcagctgaagaagac
actgcaggagaggaagaagttgaagcagaaacagcagaagctgagacagcagaagatgaa
gcgggagaaaaagaaactgctgaaggagagacagtagctgatgacgaaacagcaggagaa
gaagaggcagctgaagaagacactgcaggagaggaagaagttgaagcagaaacagcagaa
gctgagacagcagaagatgaagcgggagaagaagaaactgctgaaggagagacagtagct
gatgacgaaacagcaggagaagaagaggcagctgaagaagacagtgcaggagaggaagaa
gttgaagcagaaacagcagaagctgagacggcagaagatgaagcgggagaagaagaaact
gctgaaggagagacagtagctgatgacgaaacagcaggagaagaagaggcagctgaagaa
gacagtgcaggagaggaagaagttgaagcagaaacagcagaagctgagacagcagaagat
gaagcgggagaagaagaaactgctgaagaagagacagtagctgatgacgaaacagcagga
gaagaagaggcagctgaagaagacactgcaggagaggaagaagttgaagcagaaacagca
gaagctgagatagcagaagatgaagcgggagaagaagaaactgctgaaggagagacagta
gctgatgacgaaacagcaggagaagaagaggcagctgaagaagacagtgcaggagaggaa
gaagttgaagcagaaacaggaaaagatgaagatgcagaagaagaaactgataaagtaata
gcagcaggatcaacgccaggagaagaggagagcactgaagcagctgataataaaatgtta
ggaaaagaggaatctgaagctgaaactgcagaggccgagacagctgatgtaacagcagaa
gaagatgagactgcggaagtagaggcagctgaagaggagactgcaggagacgaggagagt
gctgaggcagagacagcgggagatgaagcaggagaggaggagactgctgaggcagagtct
acagatgatggaacagcaggagatgagactgctgaagtagaatcagctcaagaggagact
gcaggtgacgaggagagtgctgaggcagagacatccggagatgaagcaggagaggaggag
actgctgaggcagagactgcagatgatggagcaagaggagaagagactgctgaagtagac
acagctgaagggaagaatgcaggagaggaagagagtgctgaagctgaaacagctggagat
gaaactgccaaagaagaggaggatgctgaagtagagacagccgacgaggaaactgcagaa
gctgaaacagttgaaaatgaaacagttgaaggggaggaggatgctgaatctgaggcagca
gaagaggaagctgccagagacgaagacacagtggaggcagaggcagaaaccaatgatgat
gcagcaggggaagaggagatttctaaagctgagactgcagacggtgagacatctggagaa
gatgaaaccacagggcacgagtcctcagaaaatgaaacaactggcgatgagtcggccgaa
attgaaacaactggagacgaatcggcaccagctgaaactgcaggagaagggacagctgac
gatgaaacagcaggagaggaggagaatgctgaagctgaaacagcaggagaggaggagagt
gctgaagctgaaacagctgagggagaagagcagacagccggagatgaaactggaagagat
gagaatgaaaacgtgggagaagaatcatcagaagctgaggcatttgaagacgaagcagca
agtaaaagagctgaggagaatgtagaaaagggggaggatgaaacagcagaggataaagag
cctgtagttgaatcaaacattgaggagacggattgtcatgacgacgtatcggagataaaa
gcagacgacgaggcggaggagggagaaacgacagaccaagatatggttccggaggagaca
ggaacagaacaagaagatgatacaaatgcaggagacaatgtaggaaacgaggcagaagaa
gcaaagacaaacaaattaaatgcagaaaatggaacccaagaccaggccgagaacgttgta
ggggggtctgaaaaagatgaagaagtggaaactacagagggcaatgagacagccaatgaa
gaggattcctgcggaaacgttgggtactcagccgacggagaggatgaagctgaggatgag
tctgagttggaaatatccacagatgagggagaacaatcagaggtgccagctatcggggag
gacagcatgaaggaaactgttgaggaaactccaatgacctcattcgatgccttggccaga
gcagagtactctgaagacagtgcttacgccgatgttgaggattcagagactgacggtaac
aacgaggagtcagaggcacaagaagacaaaccagaagaggaggagggtgatatctcagca
gagggtcaggctgagcttcatgttgaagagactccagttgaggagctgcaggatgaggag
aaggaggaggagactccagttgaagagactcctgttgaggagttgcaggaggaagcggag
gaggaagctgaggagatggaagaagttgagatggaggaagttgaggagactcctattgag
gagctgaaggaagaagctgaggaggagcaggctgaagtggaggaggaagctgaggagatg
gaagaagttgagatggaggaagttgaggagactcttattgaggagctgaaggaagaagct
gaggaggagcaggctgaagtggaggaggaggctgaggaggatgcaactgaagatgatgct
gctgaggagcagcaggaagcagctgatgaggaaactactgaaaatgaggcttctgatgag
gaagagcaggaggaaggggtggatgagccggaagctaaagagattgaggaagctgaggaa
gatactgctgaaaacgatgatgctgttgaggaagatccagctgatgagggggatgacatc
acaagcaaaggacagtctgaagacgatagtgatagtggtggaccttctgggacatctaat
aaaagcctacgtggtcaacctaccaagtcttccatggaatcacaaccaggctcactagac
aaagtcctggatgaagaggcagcgagttcacagataggttcaggggaaaggttgggccac
cacctctctgttaagagcaaccagatgtacccgacagacacagaggacgaaagcagggtg
tcagaatgcacagaggcagtcagcgaagtcctcgagcgacaagtcgttcacccaaagaag
aagactccgaagaagactccgaagaagactccgaagaagtag
DBGET
integrated database retrieval system
