Oncorhynchus gorbuscha (pink salmon): 123992384
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Entry
123992384 CDS
T07892
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2-like
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
123992384
Membrane trafficking [BR:
ogo04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
123992384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_1
TPR_2
TPR_8
SH3_9
SH3_2
TPR_10
SH3_1
TPR_MalT
TPR_19
Motif
Other DBs
NCBI-GeneID:
123992384
NCBI-ProteinID:
XP_046149482
LinkDB
All DBs
Position
LG13:87053105..87198314
Genome browser
AA seq
1612 aa
AA seq
DB search
MTNEVTGENRQQDRDISPAELDELWREPPYTLAGTNEHFPGNDVMNPGVESGGGEAEPDS
YWKRKEEFTRGSTVSLAVGERFSSDVVLVFSGRRHSGVIPDSELQEALRTRLRVVESNSQ
DVIQLFKDLSARLLSVHAEKDSFVITFKTVEEMWKFSTYLALGYVARCLENFLCDQSFWL
DTELLRDLEITVTVDEEHLATLYLGLLLQEGSFFAKALVSSGEHSDEEEELCFRRNDLLM
VRDTGQDSHWEGTLLSTGKHGLVPVNNMQPLPYPFYQWFLRKYPGCAGSSPSERGQFDHP
IVTGSCEAVVDHNPVGCDELQLSRGDLIEIQGMLLRGLDLFIGTHCSTGNTGFVHKAHVK
PLNAKPLDGQLVFLSEEERASLSQVNPCSTEPRDSDLLERLFSSDISTVYRLDRLDQSDF
TDIRNQPEQEHKPPTSSRQSIISEKSDATLPYHFSYASQNALGRGGDGELLSFSLDDTFR
EMNEFQDDPPLFLEEGEESEGCDPTLTLLNMHHFQEDFLPLYDLHHSFLWLTFSGQSEEE
LLGHLEIVREGAKRTGMAWAHRRACFLLGRLCAKKLKYSQARVYYEEALGVSVDGFSDLP
LLIALYTNLTAIYLKQKMADKLLPTLEKASALLLCLPSHTFTSLDEFELLKLVLRRSVVE
GDKHLEARACYLTASLFLLLRKIDDALPFAERLQFLTVTLSAEEGRPISPLDLNWLLSRL
YHCKYMPYLALASLSLDSGQDHSLQDAFYRIELFSRNSVRLNPRWKEGTSLLPAQIVVYL
QQALAIAERGDDLKTQRDLCLGLACVYQQHGALEKALHCAQQAVQTGGGINEEEGFEASV
LLGWLLVLTGQPERAQNTLQPLLQSLQGTDSPTQRGVIHNLLALCLRQRGGIPEAGSHLH
HALTISRESGNQRNQALALANLGCLALGVGAPTLAERFLFRSLWLFLVIWESPVDEEHVQ
TYLWLGRSYKDRGRSQDARLCYEMGLLISLQARNLPSQMLVAKVLSRHYADVLLYGQSIL
YYEHCVSVSRDLKDKRLEGEYLEILSSLYLSLNTEKSSRKSLDYSKQSLRISIDLGKREE
ESETWLQVGHIYYLIHEDELADMYLQAAVKTALRMNDPRFAMSIYEEAGDVFFKGHRNRL
ASLPFYRDGSLPFARSIRDVHSEFRLLSKLTELLMTQEEYEEALHYAILAVQISTKTGVC
VNERTAYHRLATVYYSLEQYEMTENYYLKSLSLCPAVLQHPLEARYYTKLYCRLGDLTLH
KLKDAYDSMGYFQLAQAAALEDRANPQALYVVYMKLAEIHANHMPDPLLCQAYRDRAQSL
RRELSGLGETDGSGGMTEGRPQNYIHYCLLVRTQNYIHYCLLVRTQNYIHYCLLVRTQRY
NHYCLLIRTQNYIHYCLLVRTQNAIHYCLLVRTQNYIHYYLLVRTQNAIHYCLLVRTQNY
IHYCPLVRTQNYIHYCLLVRTQNAIHYCLLVRIQNYIHYCPLVRSQNYIHYCLLNYIHYC
LLVRTQNYIHYCLLVRTQNYIHYCLLVRTQNYIHYCLLVRTQNYIHYCLLVRTQNYIHYC
LLVRSQNYNHYCLLVRTQYYIHYCLLVRTQNYIHYCLLVRTQNYIHYPRMTS
NT seq
4839 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatgaagtgacaggagagaacagacagcaggacagagacatctcccctgctgag
ctggatgaactatggagagaaccaccgtacacgctagcgggaaccaatgagcacttccca
ggaaatgatgttatgaatccaggggtggagtctgggggcggggaggcggagccggacagt
tactggaagaggaaggaggagttcaccagaggaagcaccgtgtcactggccgtgggagag
aggttctcctcagacgtggtgctggtgttcagcggtcggcggcactcgggtgtaatacct
gactctgaactacaggaggcgctccgtaccagactcagggtcgtcgagagcaacagtcag
gatgtcatccagctcttcaaggacctgtctgcccgtctgctatctgtccacgctgagaag
gacagctttgtcatcaccttcaagactgtggaggagatgtggaagttctctacctacctg
gctctaggctatgtggcgcggtgcctggagaatttcctgtgtgaccagtcattctggctg
gacactgagctgctgagggacctggagatcactgtgactgtagacgaggaacacctggca
acactctacctgggactgctgctgcaggaggggtcgttctttgccaaggcgctggtgagc
agtggcgagcacagtgatgaggaggaggagctgtgtttcagacgtaatgacttgctgatg
gttagagacacggggcaggacagtcactgggagggcacccttctctccaccggaaaacac
ggactagtgcctgtcaacaacatgcaaccgctgccataccccttctaccagtggttcctg
aggaagtaccctggctgtgccggaagctccccttcagagagaggacagtttgaccaccct
atagtaactggttcctgtgaggctgtagtggaccataacccagtaggatgtgatgagctc
cagctgagtcgaggtgacctgattgagatacaggggatgctactccgaggtctggacctg
ttcataggaacacactgctctacaggaaacaccggctttgtacacaaggctcacgtgaag
ccactcaacgccaaaccactagatggacaacttgtgtttctgagtgaggaggaacgtgcg
tctctgtcccaggttaacccctgcagtactgagcccagagacagtgacctcctagagaga
ctcttctcctctgacatcagtactgtctacagactagacagactggatcagtctgatttt
acggacatcagaaaccaacctgaacaagagcataagccccccaccagtagccggcagtcc
atcatctcagagaagagtgacgctacactaccataccacttctcctacgcatcccagaat
gctttagggcgtggcggtgacggggagctgctgtccttcagtctggacgacaccttcaga
gagatgaatgagttccaggatgacccaccccttttcctggaggagggggaggagtcggag
ggttgtgaccccaccttgaccctgctcaacatgcatcactttcaggaggacttcctgccc
ctgtatgacctccaccactcattcctgtggctgacgttctcagggcagagtgaggaggag
ttactgggccacctggagattgtcagggagggggccaagagaacgggcatggcctgggca
caccgacgggcatgcttcctactggggaggctctgcgccaagaagctcaagtactcccag
gcccgtgtgtattacgaggaagcccttggagtctccgtggacggtttctctgacctccct
ctcctcatcgccctgtacaccaacctcacagccatctacctcaaacagaagatggccgac
aagctgctcccaaccctggagaaggccagtgctctgctcctctgcctccccagccacacc
ttcacctccctggatgagtttgagctgctgaagctggtgctgcggaggtctgtggtggaa
ggggacaaacacctggaggcacgggcctgctatctcaccgccagcctcttcctcctcctt
agaaagatagatgatgccctgcccttcgcagagcgtctccagttcctcaccgttaccctg
tctgctgaggaggggcgccccatctcccccctggacctcaactggctcctgtcccggctc
taccactgtaaatacatgccctacctggccctggcatccctcagcctggactctggacag
gatcactcactacaggacgccttctacaggatagaactgttcagcaggaactcggtgcgt
ctgaacccgcgatggaaagaggggacgtctcttctcccagcccagatcgtggtgtacctg
cagcaggctctggcaattgcggagcggggtgacgaccttaagacccagagagacctatgt
ctgggcctggcctgtgtttaccagcaacacggggccctggagaaggccctgcactgtgcc
cagcaggctgtacagaccgggggaggtatcaacgaggaggaggggtttgaggcatcagta
ctgctgggatggctgttagtcctgacgggacagcctgagagggcacagaacaccttgcag
ccactattacagtctctacagggaaccgacagcccgacccagaggggagtgatccacaac
ctgctggctctgtgtctgcggcagcggggtggcatccccgaagctggcagccacctccac
catgccctcaccatctccagggagagtggcaaccaaaggaaccaggccctggccctcgcc
aacctgggctgcctggcactgggcgtgggggcacccacactggcagaacgattcctattc
aggtctctgtggttgttcctggtgatctgggagagtcccgttgacgaggaacacgtccag
acctacctatggttggggcggagctacaaggacagggggaggagccaggacgccaggctg
tgttatgagatgggcctcctcatctccctccaggccaggaatctacccagtcagatgttg
gtggctaaagtcctgagtcgtcactatgctgacgtgctgctgtatggacagagtatcctc
tactatgagcactgtgtgtctgtgtccagggacctgaaggacaagagactagagggagaa
tatctagagatcctcagtagcctctacctgtccctcaatactgagaaatcatcaaggaag
tctctggactacagtaagcagagtctgaggatctccatcgacctggggaagagagaggaa
gagtcagagacctggcttcaggtgggacacatctactacctcatccatgaagatgaactg
gctgacatgtacctacaggcggcagtgaagacggccctgaggatgaacgacccacgcttt
gccatgagtatctacgaggaggcaggagacgtcttcttcaaaggccacaggaacagactg
gcgtcactgcccttctacagggacggcagtctcccgtttgctcggagtatccgtgacgtc
cactcagagttcagactgctgagtaaactgactgaactactgatgacccaggaagagtat
gaagaggctctacattacgccattctggctgtacagatcagcaccaaaacaggtgtgtgt
gtgaacgagcgcacagcgtaccaccgtctggctacagtgtactacagtctggagcagtat
gagatgacagagaactactacctcaagtctctgtctctctgccctgctgtactgcagcac
cccctagaggctagatactacaccaagctctactgcaggctgggggacctgaccctgcac
aaactaaaggatgcctatgactcgatgggctactttcagcttgctcaggctgctgccctg
gaggaccgtgccaacccacaggcactgtatgtggtctacatgaagctggcagagatccat
gccaaccacatgccagacccactgctctgccaggcttacagggacagagcacagagcctg
aggagggaactctctggactaggagagacggatgggagtggaggaatgacagaggggagg
ccccagaactacatccactactgtctactggtcaggacccagaactacatccactactgt
ctactggtcaggacccagaactacatccactactgtctactggtcaggacccagaggtac
aaccactactgtctactgatcaggacccagaactacatccactactgtctactggtcagg
acccagaacgccatccactactgtctactggtcaggacccagaactacatccactactat
ctactggtcaggacccagaacgccatccactactgtctactggtcaggacccagaactac
atccactactgtccactggtcaggacccagaactacatccactactgtctactggtcagg
acccagaacgccatccactactgtctactggtcaggatccagaactacatccactactgt
ccactggtcaggtcccagaactacatccactactgtctactgaactacatccactactgt
ctactggtcaggacccagaactacatccactactgtctactggtcaggacccagaactac
atccactactgtctactggtcaggacccagaactacatccactactgtctactggtcagg
acccagaactacatccactactgtctactggtcaggacccagaactacatccactactgt
ctactggtcaggtcccagaactacaaccactactgtctactggtcaggacccagtactac
attcactactgtctactggtcaggacccagaactacatccactactgtctactggtcagg
acccagaactacatccactacccaagaatgaccagttag
DBGET
integrated database retrieval system
