Oncorhynchus gorbuscha (pink salmon): 123992407
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Entry
123992407 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: transcriptional regulator ATRX-like
KO
K10779
transcriptional regulator ATRX
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
123992407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
123992407
03036 Chromosome and associated proteins [BR:
ogo03036
]
123992407
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
123992407
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
123992407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
123992407
NCBI-ProteinID:
XP_046149504
LinkDB
All DBs
Position
LG13:100222789..100332307
Genome browser
AA seq
2403 aa
AA seq
DB search
MSKASAESTDQVMEEEVGQFPITDQEEEEEEEVGQLPITDQMEEEDEEAGSSTETERPSS
SHTKRKPSVAAKQVGGNESDTSDESGQDDGASDGTLVVRPPAGTDNKEDKSRGAMKLRVD
LSRRKTGKMSKASAESTDQVMEEELGQLPITDQEEEEEEEAGSSTETERPSSSHTKRKPS
VAAKQVGGNESDTSDESGQDDGASDGTLVVRPPAETDNKEDKSRGAMKLRVDLSRRKTGK
MSKASAESTDQVMEEEVGQLPITDQMEEEEEAGSSTETERPSSSHTKRKPSVAAKQVGGN
ESDTSDESGQDDGASDGTLVVRPPAETDNKEDKSRGAMKLRVDLSRRKTDTTLEERIDCT
ACGQQVNHFQRHSVFEHPMLHVLLCKSCYKYYTSDDINKDEDGMDEQCRWCAEGGNLICC
DYCHNAFCKKCILRNLGRKELSMITDEDSKWSCYICSPQPLSDIASNCSNILTKLESFWR
TGRKKEREEKERKEVKGHSKGKGHHHHGKAVVNGKEHSDGSGTLTFSYKTLKVPKELVKR
TKKLIETTTGLNNTFIHFIQQAEEEQGAGGGGSGTRHRHLKAFRSVLADLKKAHAALEKD
LESQFTSQDQGMQNGDAVSNTDGHDGHDQIDNGQEAEEDKMADTEDGEEDGGVSEDTEME
GSPAPTSQDHSETGSQAKDQTVVKMEEEEDGTEEEADRDKDIVSVGPSVPDELFQMVKSL
ADSTGLTPGNDATELTAASQSENPAAGSTRKSHDTQKEKAMPKVKNLILKLTPVPVVTTR
ASRSKSKDGGKEKSKDGGKERSKDGGKERSKDGGKERSKDGERERSKDGGKERERSKDGG
KKRERSKDGGKEVEGDGASEEDSRCSSRTKTTPLRKSPEGKNKMSVSQENIDSEGEQKSP
SKLKKRTKGSSEKERGNAEEKERKESKASMVTSDPSKQDVDSDSDEVPDILVQTAAAEHS
SDEDVQQDADSNQGNKRVKKCLFKVSKKEEEEEEQVGEEEEQVGEEEEEEQVGEEEEQVG
EEEEEEEQVGEEEGESDKEKTDKKPAAKRKLKADDSDNSESDSDEDSKKKKKSSTASDKK
TSKKKQKVSDGSSNSDLEKEMKGLRKLATGKRRSSRVKKEREEKENKGGDRRRSYELKRK
ARSRGAKQEDSSSDDEEEEEEGGGSGEESGDQQKIKPIVDETVLAGRETFHQSSGEEGNH
DASQMAVDDDDDDPENRIAKKMLLAQIKANYSSGAEESSDEDGEEKEQRKGGEEEEEEEE
DDEEEEEEEGDSGSDMDVKKSGGRRHRLLRHKLTLSEGESGEEKEKPASKGKKETKRTRR
KDLDSEESASSSESGVSEEISEEEEESEEESEEGSSLSRTTRSSSKKKKKKKEERSYAQK
KKRRRIKVQDSSSDEKGGGGGGSGEDGSGKEDGDTPKGQRKKIRKILKDDKLRTETRDAL
KEEEERRRRIAEREQLREKLREVLVVEEASAVACPITTKLVLDEDEETKEPMVQVHRNLV
TKLKPHQVDGVQFMWDCCCESVKKTNKNSGSGCILAHCMGLGKTLQVVTLLHTLLLCEKL
DFSTALIVCPLNTVLNWLNEFEKWQYGFKDEESLEVTELATVKRPQERASALQQWQEDGG
IMIIGYEMYRNLTQGRNIKSKKLKETFQKTLVDPGPDFVICDEGHILKNEASAISKAMNS
IKTRRRVVLTGTPLQNNLIEYHCMVNFIKENLLGSVKEFRNRFVNPIQNGQAADSTDQDV
RIMKKRAHILYEMLNGCVQRRDYSALTKFLPPKHEYVVSVRVTPIQCTLYRHYLEHLTGA
GNAVEGGRGRAGTKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMDEFIASETEE
SSMSMTSEDEKQKKKKKRGKARKKDSDSDSDALEVIKEWNTSSRGGDPSSRNRAEPQEEV
RPASSPGTRSPDWHKEFVTEADSEILEHSGKMVLLFEILRMAEEVEDKVLVFSQSLISLD
LIEDFLELAGRAKEEEKQSPYKGEGKWFRNIDYYRLDGSTNALNRKKWAEEFNDTSNVRG
RLFLISTRAGSLGINLIGANRVIIFDASWNPSYDIQSIFRLYRFGQLKTCYVYRFLAQGT
MEEKIYDRQVAKQSLSFRVVDQQQIERHFTMNELTELYAFEPDLLDDPTGKKSKRTTPML
PKDPFLAELLHSNKEQIVGYHEHDSLLDHKEEEALSEEDRKAAWAEYEAEKKGLSLRVNH
GAYGGQMDMGGANSYFPFNVAALASMSNPQLEELINQGRQKVMEATNALKFLPRESLEDT
IGRVWKENPALTESQVQAMALGRQASVEMELKRREAVYRDVLNKQQTLMMYVQKVITNRK
VREQQMAMANQAQLMSQMNGMLGAGGMSQMELLGLYQQLGALQGHPTHPSMGGKNPGPSK
GNL
NT seq
7212 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaggcctcagctgaatctacagaccaagtgatggaggaggaagtaggtcagttt
ccgattacagaccaggaggaggaggaggaggaggaggtaggtcagcttccgattacagac
cagatggaggaggaggacgaggaggctgggagctcaacagagactgagagaccctcctct
tctcacaccaagaggaagccttctgttgcagccaagcaagttggagggaatgagtcagac
acctcggacgagagtggacaggacgatggcgcctcagatgggacgttggttgtgcggcct
cctgctgggactgacaacaaggaggacaagagcagaggagccatgaagctccgagtggac
ctctcacggagaaagacaggtaaaatgagtaaggcctcagctgaatctacagaccaagtg
atggaggaggaattaggtcagcttccgattacagaccaggaggaggaggaggaggaggag
gctgggagctcaacagagactgagagaccctcctcttctcacaccaagaggaagccttct
gttgcagccaagcaagttggagggaatgagtcagacacctcggacgagagtggacaggat
gatggcgcctcagatgggacgttggttgtgcggcctcctgctgagactgacaacaaggag
gacaagagcagaggagccatgaagctccgagtggacctctcacggagaaagacaggtaaa
atgagtaaggcctcagctgaatctacagaccaagtgatggaggaggaagtaggtcagctt
ccgattacagaccagatggaggaggaggaggaggctgggagctcaacagagactgagaga
ccctcctcttctcacaccaagaggaagccttctgttgcagccaagcaagttggagggaat
gagtcagacacctcggacgagagtggacaggacgatggcgcctcagatgggacgttggtt
gtgcggcctcctgctgagactgacaacaaggaggacaagagcagaggagccatgaagctc
cgagtggacctctcacggagaaagacagataccactttggaggagaggatagactgcacc
gcctgtggacagcaggtcaaccacttccagcgccactcagtgtttgagcacccgatgctc
catgtgctcctctgcaagtcgtgttataagtattacaccagcgatgacatcaataaagat
gaggacggcatggacgaacagtgcaggtggtgtgctgaaggtggcaacctgatctgctgt
gactactgccacaacgccttctgtaagaagtgcatcctgcgtaacctggggcgcaaggag
ctgtccatgatcaccgacgaggacagtaaatggtcctgctatatctgcagccctcagcct
ctctcagacatcgcctccaactgctccaacatcttgaccaagctggagagcttctggcgc
acgggacgcaagaaagagagggaggagaaagagaggaaggaggtgaaagggcacagtaag
ggtaaaggtcaccaccaccatggtaaagctgtggtgaacggtaaggaacattcagatggg
tcagggaccctcaccttctcctataagaccctgaaggtccccaaggagctggtgaagagg
accaagaagctgattgagacgaccacagggctcaacaacaccttcatccatttcatccag
caggctgaggaggagcagggagcaggaggaggtggcagcgggaccagacacagacacctc
aaggccttcaggtctgttctggctgatctgaagaaggcccatgctgctctagagaaagac
ttggagtcacagttcacttcccaggaccaggggatgcagaatggggatgctgtttccaac
accgatggccatgacggccacgatcagatagacaatgggcaagaggcagaagaggacaaa
atggccgacactgaggatggggaggaggatgggggtgtgtcagaggacacagagatggag
gggagccccgcccccacgtctcaggaccactcagagacaggcagccaggctaaagaccag
acagtggtgaaaatggaggaggaggaggatggaacagaggaggaagctgaccgggataaa
gacatcgtgtccgtcgggccgtccgtccctgacgagctcttccagatggtcaagagttta
gcggactccaccgggttaacgcccggtaacgacgccacggaactcacagcggctagccaa
tcggagaaccctgctgctggttcaaccaggaagtcacatgacacccagaaggagaaggcc
atgcccaaggttaagaacctcatcttgaagctgacgcctgttcctgtggttaccacacgc
gcctccaggtctaagagtaaggatggagggaaggagaagagtaaggatggagggaaggag
aggagtaaggatggagggaaggagaggagtaaggatggagggaaggagaggagtaaggat
ggagagcgggagaggagtaaggatggagggaaggagcgggagaggagtaaggatggaggg
aagaagcgggagaggagtaaggatggagggaaggaggtggagggagatggggcctccgag
gaggacagccgatgctccagtcgcacaaagaccacacccctcaggaagtcaccggagggg
aaaaacaagatgtccgtctctcaggagaacatagactcagaaggcgagcagaagagcccc
agcaagctgaagaagagaaccaaaggcagctccgagaaagaacgggggaacgcggaggag
aaggagcggaaagagagcaaggcctccatggtaacctctgacccttctaaacaagacgtg
gactcagattctgatgaggttccagacatcctggttcagactgcagcggcggaacacagc
tcggacgaggatgtgcagcaggacgccgacagtaaccagggcaacaagcgtgtcaagaag
tgcctgttcaaagtgagcaagaaagaggaggaggaggaggagcaggtgggagaggaggag
gagcaggtgggagaggaggaggaggaggagcaggtgggagaggaggaggagcaggtggga
gaggaggaggaggaggaggagcaggtgggagaggaggagggagagagtgacaaggagaag
acggacaagaagccggcggccaaacgcaaactgaaagccgacgactccgacaactcagag
tctgactccgatgaagactcaaagaagaaaaagaagtcctccacggcttctgacaagaag
acatccaagaagaagcagaaggtctcggacggctcctccaactctgacctggagaaggag
atgaagggactccgcaaactggcgacggggaaacggaggagcagccgtgtgaagaaggaa
agagaggaaaaggagaacaagggcggagatcggaggcggtcgtacgaactgaaacgcaaa
gccagaagtagaggagccaagcaggaagattcatcgtctgatgacgaggaggaggaggag
gagggaggagggtctggagaggagagtggagaccagcagaagattaaacccattgtggat
gagacggtgctagcagggagggaaaccttccaccagtcctcaggagaagaaggtaaccat
gacgcttctcaaatggctgttgatgatgacgatgatgatccagaaaacaggattgccaag
aaaatgctgctggcccagatcaaggccaactactcttcaggagcagaggagagctccgac
gaggacggagaagagaaggaacagaggaagggaggagaagaggaggaggaggaagaggag
gatgatgaagaggaggaggaggaggaaggggactctggctctgacatggatgtgaagaag
agtggggggcgtcgccaccggctgctccgccacaaactgacgctgagcgagggagagtca
ggagaggagaaagagaaaccagccagcaaggggaagaaggagaccaagaggaccaggcgg
aaagacttagactctgaggaatcggctagcagcagtgagtcaggagttagtgaggagatc
agtgaggaggaggaggagtcagaggaggagtcagaggagggcagcagtctctctcggacc
acgcgctcctcttccaagaagaagaagaagaagaaggaggagaggagctacgcccagaag
aagaaacgccgtcgcattaaggttcaggactcttcatctgacgagaaggggggggggggg
ggcgggtcaggagaggacggctcggggaaggaggatggagacactcctaaaggacagagg
aagaagatcagaaaaatcctcaaggacgacaagctgaggacggagacgagggatgccctg
aaggaggaggaggagaggaggagacgcatcgctgagagggagcagctcagggagaaactc
agagaggtactcgtggtggaggaggcgtccgccgttgcttgtccaatcacaaccaagctg
gtgctggatgaagacgaggagaccaaggagcccatggtgcaggttcaccgcaatctggtc
acgaagctcaaaccacaccaggtcgacggggtccagttcatgtgggactgctgttgtgag
tcggtgaagaaaaccaacaagaactctggttctggatgtatcctggctcactgtatgggc
ctgggaaaaacactgcaggtggtaaccctcctccacacactactgctgtgtgaaaagtta
gacttctccacggctctgatcgtctgtcctctcaacaccgttctcaactggctcaacgag
tttgagaagtggcagtatggcttcaaggacgaggagagtttagaggtgacggagctggcc
acggtgaagcgtcctcaggagagagcgtctgctctgcagcagtggcaggaggatggagga
atcatgatcattggctatgagatgtaccgtaacctcactcagggtagaaacatcaagagc
aagaaactcaaagagaccttccagaagaccctggttgacccaggcccagactttgtgatc
tgtgatgagggccacatcttgaagaacgaggcgtcggccatctctaaagccatgaactcc
atcaagacccgacggagagtggtgctcaccggcactccactgcagaacaacctcatagag
taccactgcatggtgaacttcatcaaggagaacctgctggggtcagtgaaggagttcagg
aaccgcttcgtcaaccccatccagaacgggcaggcagcggactccacagaccaggatgta
cgcatcatgaagaagagggcccacatcctctacgagatgctcaatggatgtgttcagaga
agagactactctgccctgaccaagttcctgcctcctaaacatgagtacgttgtgtccgtc
agagtcacgcccatccagtgtactctataccgacactacctggagcacttaacaggtgcg
gggaacgcggtggaggggggtcggggccgagccgggaccaaactgttccaggacttccag
atgctcagcagaatctggacccatccctggtgcctgcagctggactacatcagcaaggaa
aacaaggggtactttgacgaggacagcatggacgagttcatcgcctcggagaccgaggag
tcttccatgagcatgacctctgaagacgagaaacagaaaaagaagaagaagcgggggaag
gccaggaagaaggacagtgactcagacagtgacgctctcgaggtgattaaggagtggaac
accagctcccgagggggagacccctccagccgcaaccgggcggagccacaggaggaagtg
cgcccagcttccagccctggcaccaggagtcctgactggcacaaggagtttgttacggag
gccgactctgagatcctggagcattctgggaagatggtgctgctgtttgagattctccgt
atggccgaggaggtggaagacaaagttctggtgttcagtcagtctctgatctctctggac
ctgattgaagacttcctggagctggctggccgagccaaagaggaggagaaacagtctccc
tacaaaggtgaggggaagtggttccggaacatagactactaccgcttggacggctccacc
aatgccctgaaccggaagaagtgggcagaggagttcaatgacaccagcaacgtcagaggt
cggttgttcctgatctcgaccagggctggttctctgggcatcaacctgatcggagctaac
agggtcatcatcttcgacgcgtcctggaacccgtcgtacgacatccagagtatcttcagg
ctctaccgcttcggacagctcaagacctgctacgtctaccgattcctggctcagggtact
atggaagagaagatctatgaccgccaggtggctaaacagtctctatccttcagagtggtg
gatcaacagcagatagagagacatttcaccatgaatgagctgacggagctctacgccttt
gaacctgaccttctggatgatcccactggcaagaagagcaagaggaccactcctatgctg
ccaaaggaccccttcctagctgagctgctccacagcaataaggagcagattgtgggctat
catgaacatgactccctactggatcacaaggaagaggaggctctcagcgaggaggaccgc
aaagcagcctgggccgagtacgaggcggagaagaagggtctgtctctgcgtgtgaaccat
ggagcgtacggaggacagatggacatgggaggagctaacagctacttccccttcaacgtt
gccgcactggcctctatgtccaaccctcagctggaggagttgatcaaccagggccgtcag
aaggtgatggaggccaccaacgctctcaaattcctccccagagaatctctagaggacacc
atcgggagagtgtggaaggagaacccggccctcacggagtcccaggtccaggccatggct
ctggggagacaggccagtgtagagatggagctcaaacgaagagaagctgtctacagagat
gtcctcaataagcaacagactctaatgatgtacgttcagaaggtgatcaccaacaggaag
gtgagagagcagcagatggccatggccaaccaggcccagctgatgagccagatgaacggc
atgctgggagctggcgggatgagccagatggaactcttggggttgtaccaacagctgggg
gcgctacagggtcatcccacccacccctccatgggcggcaagaaccccggcccctccaag
ggcaacctgtaa
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integrated database retrieval system
