Oncorhynchus gorbuscha (pink salmon): 123992544
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Entry
123992544 CDS
T07892
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1-like isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
123992544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
123992544
Membrane trafficking [BR:
ogo04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
123992544
Endosome - Golgi transport
Arf GTPase associated proteins
123992544
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
123992544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
ArfGap
SAM_1
RA
PH_11
SAM_2
PH_3
PH_6
PH_8
PH_13
PH_9
Motif
Other DBs
NCBI-GeneID:
123992544
NCBI-ProteinID:
XP_046149709
LinkDB
All DBs
Position
LG13:complement(16182221..16301761)
Genome browser
AA seq
1643 aa
AA seq
DB search
MSEADGCVSVWEWLCVLHLEQYFPVFQDAGFLTLLECQGLTQDQLETIGITLPGHRKRIL
ASLQKTLHTNTHTHPESEPDTLHTHLAAEGDQREEERAVFTDRPSPVGSERPVPAQRPVS
RGERPVPAQKPVSRGERPVPAQRPVPKERSVSREGERDGQRPVPAQRPVPKERTKYRSVP
VETLDCVQTYPCPNTSPCPTTPHSSAQDSPLPPIPPRSTPNCPPLRFIPTSPKNSPTAPK
PRSEHNNLNTPITVPPPSLTTNLLTLPSPRPCPAPLAIYPPARHSQQVWEGGRKPSPGSP
SSSSSSSSSFERYDQSSSDQGVPPLPPKVYVVGAGPKEPHSPAPIPHRPPVLPSRTTPTQ
SDAPINEPHTDRTPPPRTKVPNTPVDTQPALPMRRIPQPRPDIRSGDSSDDYEDPDQVFP
KPQAVNMAEDPDQIYSKLQSVNMADRDVFLPVPGWGKGRYNSLCSDDELLDDDNEPISSH
RSSWQDYGLSTLQGSVYLPVRGRVLAPPPRDGPSPEPCPVLKIGWLDKNPTQGSLYYQRR
WVKLDVDYLRYFDNDKEVYSKRIIPTAAITGVTNVGEQKFEVVTANRTFLFKAESDSERN
EWVAVLQNFTRGRQEGSREMTSLVPPSFLTPGSPLTPEQQGYLELRGLRSKLYTVVSGDK
VFLYKNMEDYRLGIGITSIDMNVGNVKVTDRRSFDLTTPYRIFSFLADSEQHKEQWVEAM
RDAIGDALSNSEVANQIWAEPSNCCCADCGAAKPEWAAINLCVVVCKCCAGEHRGLGPSI
SKVRSLKMDRKVWTEELIQVFLLLGNERLNRFWAANIPPSEALSPTSCSKARRRFISSKY
RQGKYRKYHPLYGNQTELNNALCINVQCSDVLETLCLVFCGADVNCSTGQTDCPSPLSLA
LAHNQKLQAQFLSHNLNTELPRSEVTGDMEPQHYSPQHPVTHNGFLFKTASMVRPITERK
AREEFSRRWCMLNDGNFSYYESDKTSTPNGALKSTEIVCLSVNTPERHGYDHTFELYSDS
ERLYLFGTDDQDSHKEWVKSITKMFIPSNAEALLRLSFERIGRLKYKDGLNLQSPRVGWF
ALVGSSLHAYLEDSEEEEEIHLRKLQELSIQQENEVLVLVERGRTLYIEGERKLDFQGWC
VGIQKAAGSAGDSLSQQQLTEADIPVIVDRCIDYITQCGLTSEGIYRKSGVNSHVAALCE
AFRRDARNVRLKEEEHQVDDVSNTLKRFFRESGEGLFTKHASAWLSTPVIPEESKKISQY
QLLLSRLPRVNKATLRALVNHLYCVQRFAELNQMNLHNLAIVFGPTLFQSDGKDFTAGRV
VEELIEHYTDVFEVDEQQLKRQLDEITVIIKVREKLNLNSSIPASGSAGDFICTVYLEEK
KETAEQHVKIPGSMTAAELTCEILDRRKIQVREKDYWSCWEVSQKDETERPLHHLERVLP
ILHSLGTDSHLLVKKNLAMEAILVYLASKVDVSKHGMVKFREERSILGLGLNTGSFHDRY
FILNTVSLRMYKEVRSNRSEREWQVKNLRVYLGIKKKLRPPTCWGLTVIYKSEKPEKPEK
QQWYLCCDTQTEMREWFSTFLTVQYDGNVWPADAVQTRVTRALPVDTRHGNVALIPLRGS
ENEMRNSVAAFTADPLGGRDHQL
NT seq
4932 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggcggacgggtgtgtgtcggtgtgggagtggctgtgtgtgctgcatctggaa
cagtatttcccagtgttccaggacgcggggtttttaacgctgttggaatgccaagggctg
acccaggatcagctggagacgattggaatcacattgcctggacaccgcaaacgcatccta
gccagcctgcaaaaaacactccacacaaacactcacacacacccagagagtgagcccgac
actctacacacacacctggctgcagagggagaccagagagaggaagagagagcagtgttc
acagacagacccagccctgtgggaagtgagagaccagtccctgcacagagaccagtgtcc
agaggagagagaccagtccctgcacagaaaccagtgtccagaggagagagaccagtccct
gcacagagaccagtccctaaggagagatcagtgtccagggaaggagagagggatggacag
agaccagtccctgcacagagaccagtccctaaggagagaactaagtaccgctctgtccct
gtggagacattggactgtgtccagacttacccttgtcccaacactagcccctgccctacc
accccccattctagtgcccaggactcccctttaccccccatcccacctcgcagcactcca
aactgccccccactacgcttcatccccacctcccctaaaaactcccccacggcacccaaa
cccagatctgaacataacaacttaaacaccccaatcactgtacctcctcctagccttacc
accaatctcctcaccttaccctcccccaggccctgtcctgcacctctggctatctaccca
ccagccagacactcccagcaggtgtgggagggcggaagaaagccctcccctggttccccc
tcatcctcatcctcctcttcctcctcatttgaacgatatgaccagtcatcatctgatcaa
ggcgtgcctcccctcccccctaaagtctatgtggtgggggcgggccctaaagagcctcat
agtcctgctccaatcccacatcgacctcctgtcttgccctccagaaccacacccacacag
agtgatgctcccatcaatgagccgcatacggaccgaactccaccgcctcggaccaaggta
cccaatacaccagtcgacacgcagcctgctctgcccatgagaaggatcccccagccacgg
cctgatatcaggtcaggtgacagttcagatgattatgaagatccagaccaagtcttcccc
aagccccaggctgtgaacatggcagaagatccagaccaaatctactccaagctccagtct
gtgaacatggcagacagagatgtgttcctgccagtgccggggtgggggaagggacggtac
aactctctctgcagcgacgatgaactattggatgatgacaatgagccaatcagcagccat
cggagctcatggcaggactatggtctgagtacgctccagggtagtgtctacctgccggtc
agaggcagggtccttgccccgccccctagagatggcccctcccctgaaccctgccctgtt
ctaaagattggttggctggataagaacccaacccaggggtctttgtactaccagaggaga
tgggtaaagctggatgttgactacctgagatactttgacaacgacaaggaggtatactct
aagaggatcataccaacggctgccattacgggggtgaccaacgtgggggagcagaagttt
gaggtggtcacagccaaccgaacctttctcttcaaagccgagagcgactctgagaggaat
gagtgggtggcagtgctgcagaacttcactagggggcgccaggaaggcagcagggagatg
acctcattggtcccgccctcctttctgacccctggttcacccctgacccctgaacagcag
ggctacctggagctgaggggcctgcgctccaaactctacacagtcgtctctggagacaag
gtcttcctctacaagaacatggaggactaccgccttggcatcggtatcacgtctatcgac
atgaatgtaggaaacgtgaaagtcactgaccgccgcagttttgatttgaccacaccctac
cgcatcttcagttttctagcagattcggaacaacataaggagcagtgggtagaagcaatg
cgtgacgcaattggagatgctctgtccaatagcgaggtggctaatcaaatctgggcggag
cctagcaactgttgctgtgccgactgtggcgccgccaaacctgagtgggctgccatcaac
ctgtgtgtggtggtctgcaaatgctgtgcaggagagcatcggggtttgggccccagcatc
tctaaggtgcgcagtctgaagatggacaggaaggtgtggacagaggagcttatacaggtg
ttcctgttgctaggaaacgagcgtctgaacaggttctgggcggcgaacatccctcccagt
gaggcgctgagtccgaccagctgcagcaaagcccgccgacgattcatcagctctaaatac
agacagggcaaataccgcaaatatcaccccctctacggcaaccagacagagctcaacaat
gccctgtgtataaacgtgcagtgcagtgatgtgctggaaacattgtgtctggtgttctgt
ggagctgatgtgaactgttctactggccagactgactgtccctcccccctttccctggca
ctcgcacacaaccagaaactacaggcccagttcctctctcacaacctcaacacagagctg
cctcgttcggaggtgactggggacatggagcctcaacactattcaccacagcacccagtc
actcacaatggcttccttttcaagaccgcctccatggtccggcctattacggagcgcaag
gccagggaggagttcagtcgtcgctggtgtatgttaaatgatgggaactttagttactat
gagagtgacaagacctccacgcccaacggtgccctgaagtctacagagatagtctgtctg
tctgtcaacacaccagagagacatggctatgaccatacgtttgagctgtactctgactca
gagcgtctctatctgtttggaactgacgaccaagacagccacaaggagtgggtcaaatcc
atcaccaagatgtttattccgtccaatgcagaggctctgttgagactgagctttgagcgg
attggccggctgaagtacaaggacgggttgaacctacagagccctcgggttggctggttt
gcactggttggctcctccctccatgcctacctggaggacagtgaggaagaggaagagata
catctacgcaaactacaggagctctcgatccagcaggagaatgaggtgttggttctggtg
gagagaggcaggacactgtacatcgagggggagaggaagcttgacttccagggttggtgt
gtgggcatccagaaagcagcaggcagtgcaggagactctcttagtcagcagcaactaact
gaggccgacatccctgttatagtggaccgctgcattgactatatcacacagtgcggtctg
acgtctgagggtatctaccgtaagagcggtgtgaacagtcacgtggcggcgctgtgcgag
gcgtttcgacgtgatgcccgtaatgtgcgtctgaaggaggaggagcaccaggtggacgac
gtgtctaacacactgaaacgcttcttcagagagtctggagagggcctgttcaccaaacat
gctagtgcatggctcagcacacctgtgatcccagaggagagcaagaagatctctcagtac
cagctgctgctgagccgcctgcccagagtcaacaaggccacgctacgagccctggtcaac
cacctctactgtgtgcagcggtttgcagagctgaaccagatgaatctccataacctggct
atagtatttggcccaacactgtttcagagcgacgggaaggacttcacagctggccgcgtc
gtagaggaactcatagagcactacacggacgtctttgaggtggatgagcagcagctgaaa
aggcagctggatgagatcacggtcatcattaaagttagagagaagttgaacctcaactcc
agcattcctgcgtcggggtcagcaggtgacttcatctgtacagtgtacctggaggagaag
aaggagacggcagagcagcatgtcaagatccctggttctatgacggccgcagagctgacc
tgtgagattctggaccggcggaagatccaggtcagagagaaagactactggagctgctgg
gaggtcagccagaaggacgagaccgagcgtccgttgcatcatctggagcgtgtgttaccc
atcctacactctctgggtaccgactcccacctgctggtcaaaaagaacctggccatggag
gccatactggtctacctggccagtaaagtggatgtgtccaagcacgggatggtgaagttc
cgggaggagaggagcattctgggattgggactgaacaccggcagcttccacgaccgctac
ttcatcctaaacactgtctccctcaggatgtacaaggaagtgcggagtaatcgttcagag
agggaatggcaggtgaagaatctgagggtctatctaggcatcaagaagaaactacgacca
cccacctgttggggtctgaccgtgatctataaaagtgaaaaaccggagaaaccagagaag
cagcaatggtatctgtgttgtgacacacagacagagatgagggagtggttctccaccttc
ctcactgtccagtatgatggtaacgtgtggccagcggatgcagtacaaacacgtgtgacc
cgtgcgttgccggtggatacgcgtcatggtaacgtggcattgattccgttgcgtggcagc
gagaatgagatgcggaacagcgttgcagctttcaccgccgacccgcttggcgggagagac
caccagctatag
DBGET
integrated database retrieval system
