Oncorhynchus gorbuscha (pink salmon): 123992642
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Entry
123992642 CDS
T07892
Name
(RefSeq) tsukushi-like isoform X1
KO
K08130
tsukushi
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ogo00535
]
123992642
Proteoglycans [BR:
ogo00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
123992642
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Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_14
LRR_LRWD1
LRR_EndoS
LRR_RPS2
LRR_9
LRR_NXF1-5
LRRNT
Motif
Other DBs
NCBI-GeneID:
123992642
NCBI-ProteinID:
XP_046149918
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Position
LG13:27240892..27250920
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AA seq
373 aa
AA seq
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MIHFSGTTRMSLTVSEKSAGCKRTMAFPLCVSLWMLLAVHCQGRAVKNCHPSCHCEVESF
GLFDSFSLTRVDCRGVGTSPIPIPLDTAHLDLSSNSMSLLTDTMLSGPGYTTLVSLDLSN
NRISMVSPKALSRLRYLESLDLSHNSLEGLDEGCFSGLPLAEVDLSHNHFREFDLDMFIT
KGHGEPINVDLSHNQLTVVSRSSSKRPLLHVQSLTLAANQLRAVPKLKGIPLRDLSLDGN
SISHIEEGAFEDLKDLVHLSLSALPELFDIQPNSFRGLQNLQVLDLSNNAKLKALSPAVF
SGLVSLQELNLSNSGVTSLPNNMLSHLPSIKSITLGQNIHCWRAQKQGQFHRQLGQEQKH
DEVLTCDVKGIVS
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgattcatttctcaggtaccacacggatgagtttgacggtctcagaaaagtcggcaggc
tgcaagcgcacaatggcgttccccctgtgtgttagtctgtggatgctcctggctgttcac
tgccagggtagagctgtgaagaactgccacccaagctgccactgtgaggtggagagcttt
ggcttgttcgacagcttcagcctgaccagggtggattgcaggggagtgggcaccagtccc
attcccatccccctggacactgcccaccttgacttgtcctccaactccatgtccctgctg
accgacactatgctctctggacctggctataccaccttggtcagcctggacctcagcaac
aatcgcatatccatggtcagccccaaggccctgtccaggctgcgctacctggagtctctg
gacctcagccacaactccctggagggcctggatgagggctgcttctctggcctccctctg
gctgaggttgacctcagccacaaccacttccgggagtttgacctcgacatgttcatcact
aaaggtcatggagagccaatcaacgtggatctgtcccacaaccagctgacggtggtctcc
aggagttcctctaagaggcccttgctacatgtccagagcctgactctagcagccaatcag
ctgagggccgtgcctaagctcaaaggcatcccgttgagggacctaagcctggatgggaac
agtatctcccacattgaggagggggcctttgaggacctcaaggacctggttcacctatcc
ctcagtgcgcttcctgagctctttgacatccagcctaacagtttcagaggccttcagaac
cttcaggtcttggacctgtccaacaacgccaagctaaaggcactgagcccagctgtgttc
agtggacttgtgtctctacaggagctcaatctgtccaactctggagtaacgtcattgcca
aataacatgctaagtcacttgccaagcatcaagagtatcaccctgggccagaatatccat
tgttggagggctcaaaagcagggccagtttcacaggcagctcggacaggaacagaaacat
gacgaggtgctgacctgtgacgttaaaggcattgtgtcgtga
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