Oncorhynchus gorbuscha (pink salmon): 123992684
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Entry
123992684 CDS
T07892
Name
(RefSeq) Down syndrome cell adhesion molecule homolog isoform X1
KO
K06767
Down syndrome cell adhesion molecule
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
123992684
Cell adhesion molecules [BR:
ogo04515
]
Immunoglobulin superfamily
DSCAM family
123992684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Ig_5
Pur_ac_phosph_N
V-set_CD47
C1-set
Interfer-bind
Ig_C17orf99
C2-set_3
fn3_2
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
123992684
NCBI-ProteinID:
XP_046150043
LinkDB
All DBs
Position
LG13:complement(29606583..29748543)
Genome browser
AA seq
2029 aa
AA seq
DB search
MWIFAVIFFQSILNVFSEDLRSSLYFVNASLQEVVFASTTGTLVPCPAAGVPPASLRWYL
TTEEEIYDVPGIRHVHPNGTLQIFNFLPSSFSKLIHDNTYYCTAENPSGKIRSQDVHIKA
VFREPYTVRVEDQKAMRGNVAVFKCIIPASVEAYVTVVSWEKDTVSLSSGPRFLITTTGA
LYILDVQNEDGLYNYRCTTRHRYTGETRQSNSARLFVSDPTNSEPGILDGFDRREVMASH
RVELPCKASGHPMPKYRWLKDNSPLEPDTRFHQSVTGLLIESAQPTDSGTYVCEVWNSYG
NAEVVGRLLVKQPLKAVVSPRKVKGSVGSKVSLHCSVSGSDEYELSWYRNGEIIYPGNNV
RITGISRENLIMEGMAKSDGGAYQCFARKNKMSAQDFVPVILEDGTPKIMSSFSEKVVNP
NEPVFLVCNVKGTPPPSCTWNLDDDPVIKDNHHHPGHYETNEGHVVSQLNITHTKEVDGG
VYRCTCRNSAGAVYHQARINVRGAASIRPMKNITAIAGRDAYVHCRVIGYPYYSIKWYKN
SHLLPFNHRQRAFENNGTLKLSNVQELDQGEYNCRVLVKPHQETNQSVHLSVKVPPYIQP
FAFQRFSIGQRVFIPCVVMSGDQPLDITWQKDGRPIPASLGVTIDNIEFTSSLRISNLSP
DHNGNYTCIARNEAAAVEHQSQLIVRVPPQFVVQPTDQDGIYGKTVTLNCSAEGYPRPTL
IWKHSKGNGVPQFQPIALNSGSRIQLLVNGSLLIKHVLEEDSGYYLCKVSNDVGADVSKS
MYLTVKIPAMITSYPNTTMATVGQQKEMSCTAHGEKPIMVRWEKEERIINPETSRYTVVV
KEVADEVISTLKILPSVREDSGFFSCHAINSYGEDRGIIQLTVQEPPDPPEVEIREVRDR
TIALRWTMGFDGNSPITGYDIECKNKSASWNSAQITKDVSPQLNQATIIDLHPSSTYNIR
IFAKNDIGKSDTSNELTITTDEAAPDGPPQEVQLEATSPQSIKVTWKAPHKHLQNGVIRG
YQVGYREYSSGGSFQFNIISMDTTGDSSESITLDNLRKFTEYGVVVQAANRAGTGPSSQE
VITKTLEDVPSRPPENVLAMAKSPEVISLSWLTLPKEALNGNLQGYRVIYWANLPDGELG
EIRNVTTSYPSLDLDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDIPGPPAGVKAA
ASTSSVVFVSWLPPLKLNGIIRKYIVFCSNHPTVMSEFEASPDVYFYRVPNLARNRKYSI
WVVAVTAAGRGNSSETITVEPRAKAPARILTFNGTVTTPWMRDIILPCKAVGDPPPTIKW
LKGNNGTPAPVLIDGRHSVHSNASFIIRTVKAEDSGNYSCVASNNWGSDEITLNLQVQVP
PDQPRLTVTKTTTTSITLSWIPGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYRLE
NLKCGTWYKFTLTAQNGVGPGRISEIIEAKTHGKEPQFAKEHELFASINSTRVRLNLIGW
NNGGCPITSFTLEYHPMDTATWTTAQRTSLTKSYILYDLAEATWYELQMKVVNSAGSAEK
KIMFATLNADGSTIPPLLKTVDPITDNMSGNEGLKMMVTITCILVAAVMVFILLMVLKRR
RREQRLKRLRDAKSLAEMLMSKNTRTPDTSNKQQTMRMHIDIPRAQLLIEERDTMEIIDD
RSTVLLTDNDFGETSKQKSSTVTHTVHYQSLSQATGPLVDVSDARPGTNPTARRTAKAGP
AASRNRYASQWTLNRPQPPTSSHTLSTDWRLPTPRAAGSVDKESDSYSVSPSQDTDRARS
SMVSTESASSTYEELARAYEHAKMEEHLRHAKFTITECFISDTSSEQMTAGTNDYTDSLA
SSTPSESGICRFTASPPKPQDISRVMNMAAPKAHRPGGELVHLPPYLRMDFLLNRGPVSG
GRGSNGGNGGGEAGALGQACLEPQKSRTLKRPPLLEPTPMEVPTSREVQQWQPGTASTLP
QREPTGREATGDLAQAQAAKLSSSQESLLDSRGHLKQSNNPYAKSYTLV
NT seq
6090 nt
NT seq
+upstream
nt +downstream
nt
atgtggatatttgcagttatctttttccagagcatcttaaatgtttttagtgaagatcta
cgttccagcttatattttgtcaatgcatctttgcaagaggtagtgtttgccagcaccaca
gggaccctggtgccctgtcccgctgcaggggtgccccccgcctcgctgcgctggtatctg
accaccgaagaggagatctacgatgtgcccgggatccgccacgtgcaccccaatggcacc
ctccagatctttaacttcctcccctccagctttagtaagctaatccatgacaatacctac
tattgcacagctgaaaatccttcagggaaaataagaagtcaagatgtccacattaaggcc
gtatttcgggaaccctacaccgttcgggtggaggaccagaaagccatgagaggcaatgta
gcggtcttcaagtgcattatccctgcctccgtggaggcttacgtcactgtcgtatcgtgg
gagaaagacacagtctcactatcctcaggacctagatttctcatcacaaccacaggagcc
ttgtatattctggatgtccagaatgaggatggattgtataactaccgctgcactacacgg
catcgctacacgggcgagaccaggcaaagcaacagcgcccggctttttgtgtcagatccc
actaactcagagccggggattctggatggctttgaccgtcgggaggtcatggcgtcccat
cgggtagagctgccctgtaaggcgtcgggccatcccatgcccaagtaccgctggctgaag
gacaacagccccctggagcccgacacacgtttccaccagagtgtcacgggcttgctgata
gagagcgcccagcccaccgactctggcacctacgtgtgtgaggtgtggaacagctatggc
aacgctgaggtggtgggccggctgcttgtcaaacagcccctgaaggcagtggtcagccca
cgaaaggtgaagggcagcgtggggagtaaggtgtccttgcattgcagtgtcagtggctcg
gatgagtacgagctgtcgtggtaccgtaacggagagatcatctaccccggcaacaacgtg
cggatcacaggcatcagcagggagaacctgatcatggagggcatggccaagagcgacgga
ggggcctaccaatgtttcgccaggaagaacaaaatgtccgctcaggattttgttccggtc
atcttggaggacggcactccgaagattatgtcctccttcagtgagaaggtggtcaacccc
aacgaaccggtcttcctggtgtgtaacgtcaaaggcactccccctccctcctgcacctgg
aacctggacgacgacccggtcatcaaggacaaccaccaccaccccggccactacgagacc
aacgagggccacgtggtcagccagctgaacatcactcacactaaggaggtggacggaggg
gtgtatcgctgcacctgcaggaactcggccggggcagtctaccaccaggctcgaataaac
gtaagaggggctgccagcatccgtccaatgaaaaacatcacggccatcgcagggcgggac
gcgtacgtccactgtcgcgttattggctacccgtattattccatcaagtggtataagaac
tcccacctgctccccttcaaccacaggcagagggcttttgagaacaatggcactctgaag
ctgtctaacgtgcaggagctggaccagggagagtacaattgcagggtattggtcaaacct
caccaagagaccaatcagagcgtccatctcagtgtaaaagttccaccgtacatccagccc
tttgcattccagcggttctccattggccagcgtgtcttcatcccctgcgtggtaatgtca
ggtgaccagcccctggacatcacatggcaaaaggatgggcggccaatccctgccagtctg
ggggtcaccattgacaacatagagttcaccagctcactgcggatctccaacctgtcccca
gaccacaacggaaactacacctgcattgcacgcaacgaggctgcagccgttgagcaccag
agtcagctcattgtcagggttcctccccagtttgtggtgcagcccacagaccaggatggg
atctatgggaaaactgtgaccctcaactgctctgctgagggttatccacgccccaccctc
atatggaaacactccaaaggtaacggggttccccagttccagcccatcgccctgaactct
ggctcccgtatccagctgctggtcaacggctctctgctaatcaaacacgtgctagaggag
gacagcggctactacctgtgtaaggtcagcaacgatgtgggagctgacgttagcaagtcc
atgtacctcaccgtcaaaatcccagccatgatcacgtcgtaccccaacaccaccatggcc
acggtgggccagcagaaggagatgagctgcacggcccacggggagaagcccatcatggtg
cgctgggagaaggaggaacgcatcatcaacccagagaccagccgctacaccgtcgtggtc
aaagaggtggctgacgaggtcatctccactctgaagattttgcccagtgttcgggaagat
tctggattcttctcctgccatgccatcaactcctatggtgaagacagagggatcattcag
ttaacagtacaagaacctccagaccctcccgaggtggagatccgagaggtcagagaccgg
accattgccctccgctggaccatgggcttcgacggaaacagccccatcacaggatatgac
attgagtgcaagaacaaatcagcctcgtggaattcagcccagataacaaaagacgtgtcc
ccccagctgaaccaggccaccattatagacctgcacccctcctccacctacaacatccgc
atttttgctaagaacgacatcggcaagagcgataccagcaacgagctcactatcaccact
gacgaagcagcccccgatggccctccacaagaagtacaactggaggccacctctccacaa
agcatcaaagtcacctggaaggccccccacaagcaccttcagaatggggtgatccggggc
taccaggtgggttacagagagtacagctctggaggcagcttccagtttaacatcatcagc
atggacaccacaggggacagcagcgagagcatcaccctggacaacctgaggaagttcact
gagtatggggtggtggtgcaggcggctaaccgtgcaggcaccgggccctcctctcaggag
gtcatcaccaaaacactggaggatgtcccctcgcgtccccctgagaatgtcctggccatg
gccaagtctccagaagtcatctctctttcctggttgaccctgcccaaagaggccctcaat
ggaaacctgcagggctacagagtcatctactgggccaatctgccagatggagagttggga
gagatcaggaacgtgaccacctcctacccgtctctggacctggatggtctggagaaatac
accaactacagcatccaggttctggccttcacccgggccggggacggggtgcgcagcgag
cagatcttcacccggaccaaggaagacatccctgggcctccagcgggagttaaggccgca
gcctccaccagctccgtggtgtttgtgtcctggctccctcctctcaaactcaacggcatc
attaggaagtacatcgtcttctgctccaaccaccccactgtgatgagtgagtttgaggct
tctcctgatgtatatttctacagagtgccaaacctggcccgcaacaggaagtacagcatc
tgggtggttgccgtgacagccgctgggcgaggcaacagcagtgagaccatcacagtggaa
cctcgggccaaagctccggccaggatcctgacgttcaacggaacagtgactacaccctgg
atgagggacatcattctgccctgcaaggcggtcggagatccaccccccaccatcaagtgg
ctgaagggaaacaatggtacccctgctcctgttctgattgacggacgccacagtgtccat
agcaacgctagtttcatcatccggacggtgaaagcagaggactctgggaactacagctgt
gtggccagcaacaactggggctctgatgaaatcacgctgaacctgcaggttcaagttcct
ccagaccaaccacgcctcacagttaccaagacaactaccacgtcaatcactctgtcctgg
atacctggggacaatggaggaagctccatcagaggctacatcctgcagtactcagaggac
aacagtgagcagtggggcagctttcccatcagccctagtgagcggtcgtaccgtctggag
aacctgaagtgtggcacctggtacaagttcaccctgactgctcagaacggagtgggcccc
ggacgcatcagtgagatcattgaagcaaagacccacggaaaagagccccagtttgccaaa
gaacatgagctgtttgccagcatcaactccacccgggtcaggctcaatctaattgggtgg
aacaatggtggctgcccaatcacctcgttcaccctggagtaccatccgatggacacggca
acgtggaccacggctcagcgcacctccctaaccaagagctacatcctgtatgacctggcg
gaggcaacctggtacgagctgcagatgaaagtggtcaatagcgccggctctgctgagaag
aagatcatgttcgccacgctcaacgccgatggaagcaccatccctcctctgttgaagaca
gtggaccccatcacagacaacatgtcaggcaacgaggggctgaagatgatggtgaccatc
acctgtatcctggtggctgctgtcatggtcttcatcctcctgatggtgctgaagaggagg
aggagggagcagaggctcaagaggctacgcgatgcaaaaagccttgcagaaatgctgatg
agtaaaaacacacggacaccagacacatccaacaagcagcagaccatgagaatgcacatc
gatatcccccgagcccagctgctcatcgaggagagagatactatggagattattgacgac
aggtcgacggtgctgctgactgataatgactttggggagacgtccaaacagaagtcgtcc
actgtcacgcacacagtccactaccagtccctgtcgcaggccaccggcccactggtggac
gtctccgacgcccggcctggaaccaaccccacagcacgccgcactgccaaagcaggccct
gcagccagcaggaaccgctatgccagccagtggactctgaaccggccacaaccacccacc
tcctcccacaccctgagcacagactggagactgcccacaccacgtgctgccggctctgtg
gacaaggagagcgacagctacagcgtcagcccatcgcaggacacagaccgcgcgcggagc
agcatggtgtcgacggagagcgcgtcgtccacgtacgaggagctggcccgggcctacgag
cacgccaagatggaggagcacctgcggcacgccaagttcactatcacagagtgcttcatc
tccgacacctcctcggagcaaatgacggccggcaccaacgactacacagacagcctggca
tctagcacgccgtctgagtcaggcatctgcaggttcacagcctccccgcccaagcctcag
gacatcagccgggtcatgaacatggcagcaccaaaggcccacagaccgggtggagagctg
gtgcacctgcccccgtacctacgcatggacttcctgttaaaccgtggccctgtgtcggga
ggccgggggtccaacggtggtaacggaggaggggaggcaggggcattgggccaggcgtgt
ctggagccccagaagagccgcaccctgaaacggcccccgctcctggagcccacacccatg
gaggtgcccacgtccagggaggtgcagcagtggcagccagggactgcctccaccctgccc
cagcgtgagcccactggccgtgaggccaccggagacctggcccaggcacaggccgccaag
ctcagtagctcacaggagtccctgctagattccagaggacacttaaaacagagcaacaac
ccctacgcaaagtcctacacactggtataa
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integrated database retrieval system
