Oncorhynchus gorbuscha (pink salmon): 123992719
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Entry
123992719 CDS
T07892
Name
(RefSeq) protein Smaug homolog 2-like isoform X1
KO
K27396
protein Smaug
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
123992719
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
123992719
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHAT
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
123992719
NCBI-ProteinID:
XP_046150125
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All DBs
Position
LG13:complement(31756176..31780069)
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AA seq
681 aa
AA seq
DB search
MMFRDQVGILTDWFKGWNECEQTVALLSLLKRASRTQARFLHICLEHWLADCTEIHILEA
EANNADIVSQWHLEPMEKAVSLLLSHLPLLQPRNSEAKCEYMKLLQKVLSHTIESSLFVE
ESRQLLSYALIHPATTLDDRTSLAMWLNHLEEHLSSGYPAPSRPPSGPYHPRQGSDEWPG
PAEVLDPGHGWLDKPPSSSSSPAGQNGHMSFQGGMPSPINSNNAGMGQMGQPSPLKRSSS
LIPSSSQVCGADWLSQDDLGGRQAFDHAPLSPQSSVASSGSEQTEDQGSRNTFQEDGSGM
KDVPMWLKSLRLHKYAALFSQMTYEEMMILTEHHLESQVCHRLSQNVTKGARHKIALSVQ
KLRERPSVLKSLEKDILEGGNLRNALQELQQIITTPIKVYSYSPPSVSHRDMEGSGSSSD
HTNPGEDKDLAQEGFQPHNPPPCDGESSATPISDGDIAGQFTRVMGKVCTQLLVSRPDEE
NISCYLQLIEKCLTHEAFTETQRKRLVSWKQQVLKLLRLFPRKAMLDMPVYRQKGWAYGS
NSLPTAGSVSAGGLARRGQRAFQMPPRGLPAGRMGLLSPGGIGVASPRHTLTSPTLPGQG
RQNLWFANPGGSNSMPSQSRSSVQRTHSLPVHTSPQTMLLFQQHECQVPGADLEINPTLE
SLCLSMTEHALGDGIDRTSTI
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccgagaccaggtgggcatcctgacggactggttcaagggctggaacgagtgt
gagcagacggtggcgctgttgtccctgctgaagagagcatctcgtacccaggcccgcttc
ctgcacatctgcctggagcactggctggcagactgcactgagatccacatcctggaggct
gaggccaacaatgcagatattgtgagccagtggcacctggaacccatggaaaaggcggtg
tccctgctgctgtcccacctgcccctgctgcagccccgcaacagcgaggccaagtgtgag
tacatgaagctgctgcagaaggtgctgagccacaccattgagagcagtctgtttgtggaa
gagagtagacagctgctgtcctacgccctcatccacccggccaccaccctggacgaccgc
acctcgttggccatgtggctcaaccacctggaggagcacctctccagcggctacccagcg
ccctcccggcccccctctggcccctaccatccccgccagggctcagatgagtggccgggc
ccagcagaggtcctggaccctggccatggctggctggacaagcccccctcctctagctcc
tcccctgcagggcagaacggacacatgtctttccagggtgggatgcccagtcccataaat
agcaacaacgcaggcatgggtcagatgggccagcccagtcccctgaagaggtcctcgtcc
ctaatcccctccagttcccaggtctgtggcgcagattggctgagccaggacgacctgggg
gggcgacaggcctttgaccacgcccccctgtccccccagagtagtgtggcatcctcaggc
agcgagcagactgaggaccagggctccagaaacaccttccaggaggatggcagtggcatg
aaagatgtacccatgtggctgaagagcctccgtcttcataagtacgcagcacttttctcc
cagatgacttatgaggagatgatgattctgacagagcaccacctggagtcacaggtttgt
catcgtttgtcacagaatgtgaccaaaggtgcgcggcacaagatagccctgagtgtccag
aagctacgggagaggccaagcgttctcaagtctttagagaaggatatattggaggggggc
aacctgcgtaacgccctacaggaactacagcagattatcaccacccctatcaaggtctac
agctacagccctcccagtgtttcccacagagatatggaggggagtggatcctcctcagac
cacacaaaccctggggaggacaaggacctggcccaggagggcttccagccccacaacccc
cctccctgcgacggagagtcctcagccacacccatctcagacggcgacattgctgggcag
ttcacgcgtgtcatgggtaaagtgtgcactcagctactggtgtccaggcctgacgaggag
aatatcagctgttacctgcagctcattgagaaatgtctgacacatgaggctttcacagag
actcagaggaagaggctggtctcctggaagcagcaggttctcaagctgctccgcttgttc
ccaaggaaagccatgctggacatgcctgtgtaccgacagaaaggctgggcatatggttcc
aactccctccccacagcaggctctgtgagtgctgggggtctggcacgtagggggcagagg
gcattccagatgccgcctcgtggcctccctgccgggcgcatggggctcctgagtccaggt
ggcattggggttgcctccccacgccacaccctcaccagccccacactgccaggccagggc
agacagaacctgtggtttgccaaccctgggggcagcaacagcatgccaagccagagtcgc
agctccgtgcaacggacccactcactccctgtccacacctccccgcaaaccatgctcctg
ttccagcagcacgaatgccaagttccaggtgcagacctggagatcaaccccacgctggag
tcactgtgcctcagtatgacagagcatgccttaggagatggaattgaccgaacatcaaca
atttga
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