Oncorhynchus gorbuscha (pink salmon): 123992744
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Entry
123992744 CDS
T07892
Name
(RefSeq) hepatocyte nuclear factor 1-beta-A-like isoform X1
KO
K08034
transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
123992744
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
123992744
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
Homeodomain
Homeobox_KN
RHH_ERCC6L2
Motif
Other DBs
NCBI-GeneID:
123992744
NCBI-ProteinID:
XP_046150172
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Position
LG13:33185413..33210536
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AA seq
580 aa
AA seq
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MFSKMVSKLTSLQQELLSALLDSGVTKDVLIQALDDMDPSPNGFGVKLENLQMSPPSSKI
NGNDSKPVFLTLTNGHSKGKLSGDEGSEDGDDFDTPPILKELQSLNTEEAAEQREEVDRI
LAEDPWRAARMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTQKRAALYTWYV
RKQREVLRQFNQAVQGSDSNMTEKGSQDQVLFFFPEFNPPGQGMGQQGEEVGSEPSCKKM
RRNRFKWGPASQQILYQAYERQKNPSKEEREALVEECNRAECLQRGVSPSKAHGLGSNLV
TEVRVYNWFANRRKEEAFRQKLAMDAYPIPTHSMNPLLSHSHNSPHHHSSQISASPPSKM
QVRYSQQGPGEVSSSTTISHHGSMATSQSVLQQVSPGGLDPSHSLLSPDAKMMSASGGGL
PPVSTLTNIHSSHHTHQQTQNLIMPLSGVMTIAQSLNTSQSVPVINSVGGSLAALQPVQF
SQQLHSPHQHGLMQQSPSHMNQHPFMATVTHSHSQYLPLMYPHKQEPPQYSHQSRFPSTM
VVTDANSLSTLSSMSSSKQDSTVNKMVQLGGLSWCPLQAW
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgaaaatggtgtccaagttgacatctctccaacaggagctcttgagcgccttg
ttagattccggagttaccaaagatgttctgatccaagcgttggacgatatggaccccagc
ccgaatggctttggagttaagttggagaatctacagatgtctccgccaagttctaaaatc
aacggaaatgattcgaagccggtatttcttacgttgaccaatgggcatagtaagggcaaa
ctgtcgggagatgagggatccgaggacggggacgatttcgataccccaccgatactgaaa
gaactccagtcacttaacaccgaggaagcagcggaacagagggaagaagttgaccgaata
ttagctgaggacccctggcgtgccgcccgaatgatcaaaggctacatgcaacagcacaac
ataccacaacgtgaggtggtggatgtaaccgggctaaatcagtctcacctctcacagcac
ctcaacaaaggcacgcccatgaaaactcagaagcgagcggcgctctacacctggtatgtc
aggaaacagcgggaagttctcagacaattcaaccaggcagtgcaaggttctgacagcaat
atgaccgagaaaggcagtcaggatcaggtgctgtttttcttcccagagttcaaccctcct
ggtcagggtatggggcaacaaggggaggaggtgggctcggaaccctcctgcaagaaaatg
agacggaaccgttttaaatgggggcctgcatcacaacagatcctctaccaggcctatgaa
agacagaagaaccccagcaaagaggagcgggaggcgctggtggaagagtgcaacagggct
gagtgtcttcagagaggggtgtctccgtctaaagctcatgggctgggctctaacctggtc
actgaggtacgggtctataactggtttgccaaccggcgtaaggaggaggccttccgtcag
aagctggcgatggatgcctaccccatacccacccacagcatgaaccctctcctgtctcac
agccacaactccccacaccaccacagctcccagatcagcgcatccccccctagtaagatg
caagtgcggtacagccaacagggacctggtgaggtcagctcctcgacgaccatcagtcac
cacggcagcatggcgaccagccagtcggtgttacagcaggtgtctccgggaggcttggac
cccagccacagtctgctgtcacctgacgccaagatgatgtctgcgtcaggtggaggcctg
ccacctgtgagcacgctgaccaacatccacagctcccaccacacacaccagcagacacag
aacctcatcatgcctctctctggagtcatgaccatcgcacagagtctgaacacgtcgcag
tcagtgcctgtgatcaacagcgtgggggggagccttgcagcgctgcagccggtgcagttc
tcccagcagctccacagtccccaccagcatggcctgatgcagcagtcccccagccacatg
aaccagcatcccttcatggccaccgtgactcattcacacagtcagtacctgcctcttatg
taccctcataagcaggagccaccgcagtattctcaccagtcacggtttccctcaaccatg
gtggtgacagacgccaacagcctcagtactctcagctccatgtcatccagcaaacaggat
tctaccgtaaacaagatggtgcaactggggggtctctcctggtgtcctcttcaagcctgg
tga
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