Oncorhynchus gorbuscha (pink salmon): 123992926
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Entry
123992926 CDS
T07892
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein L-like isoform X1
KO
K13159
heterogeneous nuclear ribonucleoprotein L
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogo03041
]
123992926
Spliceosome [BR:
ogo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
123992926
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GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_10
RRM_occluded
RRM_3
DUF4523
Motif
Other DBs
NCBI-GeneID:
123992926
NCBI-ProteinID:
XP_046150526
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All DBs
Position
LG13:42354255..42362685
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AA seq
562 aa
AA seq
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MCDCSRLSRPFHTVTATNLFNWDNMAMAGRYYEGGRATKRLKTNDGMATEGYDDPHKTLP
SPVVHVRGLVDGITEADLVEALQEFGAISYVVVMPKKRQALVEYEDLNGSCTAVTYANDN
QIYISGHPAFVNYSTSQKISRPGDPDDSRSVNNVLLLTIMNPIYPVTTDVLYTVCNNCGP
VQRIVIFRKNGVQAMVEFDSVQSAQRAKASLNGADIYSGCCTLKIEYAKPTRLNVFKNDQ
DTWDYTNPNLSGQDAEADGNGSNAGEDGSANPNKRVRAPALLGDHPPEYAGGYHGYDESG
YGPPPPPHYSEGRRMGPPMRGRGGAHSYGGGPGYGPPPPPPGEYSAHADSPVVMVYGLEP
AKMNADKVFNVFCLYGNVERVKFMKSKPGAAMVEMGDCYAVDRAITHLNNNFLFGQKLSV
CVSKQQAIMPGQSYELEDGSTSFKDFHGSRNNRFTSPEQAAKNRIQHPSNVLHFFNAQPD
SSVEIFTQICEDVGVKAPANIKLFTGKSAGPGERSSSGLLEWESINDAMEALSMINHYQM
KNATGPYPYTLKLCFSTAQHAT
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgactgttcacgactttcccgtccatttcacaccgtcaccgctaccaaccttttt
aactgggacaacatggctatggcaggccgttattacgaaggcggcagggcaacgaaaaga
ctaaaaaccaacgacggaatggcaacggaaggctatgatgacccacataagacccttccc
tctccagttgtgcatgtgaggggtttggtggatggcattacagaagctgaccttgtggag
gccctgcaggagtttggagctattagctatgtggttgttatgcccaagaagcgtcaggcc
ttggttgagtatgaggatttgaatgggtcttgcactgctgtgacttatgcgaatgacaac
cagatctacatttctgggcacccagcctttgtcaactactccaccagccagaagatctcc
cggccaggcgacccggacgattctagaagtgttaacaatgtgctacttctcaccatcatg
aacccaatctaccccgttaccacggatgtcctctacactgtctgcaataactgcggccct
gtccagaggattgttatctttcggaagaatggtgttcaggccatggtggaatttgattca
gtgcagagtgcacagagggcgaaggcctccctcaatggggcagacatctactctggttgc
tgcacactcaagatcgaatatgccaagccaactcgtctcaatgtgttcaagaatgaccag
gacacttgggactacaccaaccccaacctgagtggtcaagatgcagaagctgatggcaat
gggagcaatgctggagaagatgggagtgccaaccccaacaagcgtgtgagggcaccggct
ctgctgggagaccaccctccagagtacgcgggtggttaccatggatatgatgaaagcggc
tatggccccccaccacccccacattacagcgagggccgtcgcatgggtcctcccatgagg
ggacgagggggggcacacagctacggcgggggacctggctacgggcccccccctccaccc
cctggcgagtacagtgcacacgcagactcccctgtagtcatggtctacggtttggagcct
gccaagatgaacgccgacaaagtgtttaatgttttctgtctctatggcaatgtggagcgg
gtgaagtttatgaagagtaagccaggagcagccatggtggagatgggagactgttacgct
gtagaccgggccatcactcacctcaacaacaacttcctttttggacagaagctcagcgtc
tgtgtgtccaaacagcaggccatcatgcctggtcagtcttacgagctggaggacggcagc
accagcttcaaggacttccacggctcccgcaacaaccgcttcacctccccagagcaggct
gccaagaaccgcattcagcacccaagcaatgtcttgcacttcttcaacgcccagccagac
tcatccgttgagattttcactcagatctgtgaagatgttggtgtcaaagcccctgcaaat
atcaaacttttcacaggaaagagtgcaggtccaggtgagcgcagctcgtcagggctgttg
gagtgggagtccatcaacgacgccatggaggccttgtccatgataaaccactaccagatg
aagaacgcaactggcccatacccatacaccctcaagctgtgcttttctaccgctcagcat
gcaacctaa
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