Oncorhynchus gorbuscha (pink salmon): 123993029
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Entry
123993029 CDS
T07892
Name
(RefSeq) latent-transforming growth factor beta-binding protein 4-like isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
123993029
Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
123993029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
hEGF
EGF_3
FXa_inhibition
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
123993029
NCBI-ProteinID:
XP_046150720
LinkDB
All DBs
Position
LG13:complement(46646708..46752133)
Genome browser
AA seq
2162 aa
AA seq
DB search
MSSRRYANFFVLGVTFLVFLTFSKCGTLVRRSARKGHEMQRRTADRYQHATVNDQVYQTR
WRMTTTSKPKLKQKQYHFNGKKYWKYATNVTLQLNGTNVCGNRCCHGWTVSPKTQKCTKP
RCLPRCHNGAVCRQPNICECRTGFYGARCEFASVTYGLVGLPWAFLRPTSPMVSTTTTLS
PTTTLSPTTVIPNTTPVPTETTAAWRTEGTPVSTVRWKPLTLQEAQSVLLKKALARGGRG
DKMTSILMKHIETERKKLQSASPSDLQDTRTTSVKSFHTQKGQYTIHVSPPAASNQTAGH
RGGTAAGAGRRGAERIKVLFTPTVCKVRCTQGRCTNFCEQGNVTALYISEQGDRAALGPG
FRVFLCPMLCQNGGVCIQKDRCLCPLTFTGKFCHIPVATPSTNDIEKHPRSPSVLASQQL
LSQSEYILPLQSQQQSHSQPSGASGSSMVKVRVQHPPEASVKIHQVLKVGYGPGTVREQT
ETVTWSAGLSGASTSVLPGERAAATPPKPRVQAQTLHGNSTNTESSVFKYCFREVRNGQC
SSPLPGLRSQDTCCRGIGLAWGINECVLCPPNTGNGVDGSCPAGFERINGTQCVDVNECL
QPGFCENGNCVNTRGSYSCVCRQGYILDASHGICISHRVISEDKGQCYRILNSGSGRGSC
SVPILRNITKQICCCSRVGKAWGENCERCPYFGSVAFKEICPAGPGYHYSASVIQFNQRL
LEQHGTGGPPVISQSTGQTRPQQPASSGAQTPQTSHQQSSGSLTPQTRPQQPGITTLLTT
PTRPQQPGGGALTLQTRPQQPSVEQWSSGGSLSSQGRPHIPASSVTAGPTRVVTARPLTQ
TQWPPVDRQPVSPVRPAQPLPPLVTPRPPIPRPVRGVCETMPQVCGQGHCVNQPGGRHTC
ICNEGYQLNAQQTQCQDIDECRASPPPCGSGRCQNTEEGYRCSCPSGYQPGPRGTSCIDI
DECRQLPNPCNNGRCENSPGSFKCVCRTGYTLEGNACKDVDECEDPLRCPVQACANSPGS
YKCVSCPPGFGLLNEQCSDVDECHQTPSLCTNGRCENTPGSYRCVCHTGYKRQGKTCTDV
DECEDPLRCPGQACVNSQGSYNCVSCTPGFSMINGQCSDIDECRQTPSPCTTGHCENTQG
SYSCACLTGYRLHGDTCTDVDECADPSQCPGQECVNSLGSYKCVSCKPGFGLVDRHCTDV
DECLRSPTPCANGRCENTAGSYKCACRSGFRLQGNTCGDVDECENALQCPGRQCINSEGS
FICVACSPGFEAGNGQCTDIDECRQTSNLCANGRCENTPGSYRCVCRTGFTPQGSICIDL
DECEDPSQCPGQRCVNSEGSYKCIACKAGHGMRDGLCADVDECQSPDTCGAARLCVNTDG
SYRCDCQPGYRTAGLGRQCRDVNECLEGEYCFPRGECVNTEGSYRCVCSQGYTTSSDGSS
CLDVDECARSGPGACQDGRCVNTEGSYQCQCQVGFTTNPEKTACLDVDECSEGAVCRTQR
CENTVGSYRCITSCEPGYRVTRTGECVDINECANETVCGEHAFCQNLIGTYQCMCDQGYT
ATSDGKGCVDENECETMQGVCGAAHCENVDGSFMCECPGEGEEFDTRSGQCLSTPRPGRP
AYPGGSSSSSSSSTTGLGPQRQPDASQLPPARPGEFRECYYSTGEQSSCSVLARNTTQQE
CCCTVGQGWGMGCQYDPCPPLGTAEHQALCPSGRGYVTGPGAFSYKDVDECKLFHPEVCK
SGVCVNNIPGYSCYCTIGYYYDDVFLECIDVDECEAGEDSCPGGICVNILGSHFCTCEPP
LVLDDTQRSCVNSTDLAVDENLSFCWQFVTADLVCQSPLLGGQVTFTECCCLYGEGWGLQ
CALCPARDSEDYAARCNVFLGPPEFPPPFPDPYGPDPGPGPGRGGEGGGGVGYRVPNGPD
SFPDPIPRRPEYPQPDYDDYTPAGGSRSGFRSRTPSTFSVPESPYRRPSGYIPERYYDED
DYGPPDAPPRPHFRTLPDPRSELAFGARPPPPIREGLPLSLAPLSDSDPYSEEEEEEGPE
PWRVGPPFPPFPDRQGPGGGGGPRRVYERRYEPYAGLSTEDCGILHGCENGRCIRVAEGY
TCDCYEGYELDMTSMACIDINECVDLDNACVNGRCIDTDGSYRCVCHRGYVMSRRPNHCV
AA
NT seq
6489 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcaggagatatgctaactttttcgttcttggagtgacatttcttgtatttctt
acattttcgaaatgtgggacactagtgaggcgttcagcccgtaaagggcacgagatgcag
aggcgaacggcggacaggtaccaacacgcaaccgtgaatgatcaagtttatcagactcgg
tggagaatgacgacgacttcaaaacccaaattaaaacagaaacagtaccattttaatgga
aagaaatactggaaatacgcaactaatgtcacacttcagttaaatgggactaacgtatgt
ggaaacaggtgctgccacggatggaccgtttcacccaagactcagaaatgcaccaaacca
agatgccttccacgttgccacaacggagccgtgtgcaggcagcccaacatctgtgaatgc
cgaacgggcttctacggggcccgctgtgagtttgcaagcgtgacctatggcctcgtaggc
ctaccctgggccttcctgcgccccaccagccccatggtcagcaccaccaccaccctttca
ccaaccaccaccctctcaccaaccaccgtcatccccaacaccaccccagtgcccactgag
accacagctgcatggaggacagaggggacaccagtcagcactgtgcgctggaaacctctt
actctgcaggaggctcagtcagtgctgctaaagaaggcattggcccgtgggggccgaggc
gacaagatgacctccatcctgatgaaacacatcgagacagagcggaagaagcttcaatca
gcctcaccgtcagacctacaggacacccggaccaccagtgtcaagagcttccacacccag
aagggccagtacaccatccacgtgagcccacctgcagccagcaaccagaccgccggccac
cgaggaggaacggcagcaggggcaggaaggagaggagctgagcgcatcaaggtgctcttc
accccgaccgtctgcaaggtgcgctgcacccagggacgctgcaccaacttctgcgagcag
ggcaatgtgactgccctctacatcagtgaacagggggaccgggctgcactgggaccgggc
ttcagagtcttcctgtgccccatgttgtgtcagaacggaggggtctgcatccagaaggac
cgctgcctctgcccgctaaccttcaccggcaagttctgccacatccccgtggccacgccc
tccaccaatgacattgagaagcatccgcgcagcccctcggtgctggccagtcagcagctg
ctgtcccagtcggagtacattctccccctgcagagccagcagcagagccacagtcagccc
agcggtgcatctggctcatccatggtgaaggtgcgggtgcagcacccaccagaggccagc
gtgaagatccaccaggtgctgaaggtgggctatgggccaggcacggttagggagcagacg
gagacagtcacctggtcagcaggcctctcgggggccagcaccagtgttctgccaggggag
agggccgcagccacaccacctaaacccagagtccaggcccagaccctccacggtaactcc
accaacacagaatcttctgtgttcaagtactgcttcagggaggtccgcaacggccagtgc
agctcacctctcccaggactgaggagtcaggacacctgctgccgagggattggattggcc
tggggcatcaacgagtgtgtcctatgtccccctaacacaggaaatggagtcgatgggagc
tgtccggctggatttgagaggatcaacggcacccagtgtgtcgatgttaatgagtgtttg
cagccaggcttctgtgagaacggcaactgtgtgaacactcgagggagctacagttgtgtc
tgcaggcaaggatacatactggacgcctctcacgggatctgtatctcccatagggtgatc
tcggaggataagggccagtgctatcgtatcttgaactctggctctggccgtggtagctgc
tccgtgcccatccttaggaacatcaccaagcagatctgctgctgcagccgcgtgggcaag
gcctggggagagaactgtgagaggtgtccttactttggatcagttgctttcaaggagatc
tgcccagcagggcctggctaccactactctgcctctgtcatccagttcaaccagaggttg
ctggagcagcacgggactggaggtccccctgtcatatcccagagcacgggacagaccagg
ccacaacaaccagccagtagtggtgcacagactccccaaactagtcaccaacaatcttca
ggctctctcactccccaaaccaggcctcaacaaccaggtatcactactctgctcaccact
ccgaccagaccccaacagccaggtggtggcgctctcacgcttcagaccagaccccagcag
ccatcagtggagcagtggagcagtggaggctccctgtcctcccagggcagaccacacatt
ccagccagctctgttacagcaggacccacccgggtggtgaccgctcggcccctcactcag
acccaatggcctccagttgaccgacagccagtatctccagtgagacctgcccagcccctc
ccacctctggtcacgccccgcccacccatccccaggccagtgcggggtgtgtgtgagacc
atgccccaggtgtgtggacagggccattgtgtgaaccagcccggagggagacatacctgc
atctgtaacgagggataccaactcaacgctcagcagactcagtgtcaagacatagacgag
tgcagggcttctcccccgccctgtggcagcggccgctgccagaacacagaagagggctac
aggtgcagctgcccctctggataccagccgggaccccggggcaccagctgtatagatatt
gacgagtgtcgtcagcttccgaacccctgtaacaacggccgctgtgagaatagccctggt
agcttcaaatgtgtctgccgcactgggtacacgctagagggaaacgcatgtaaagatgtg
gatgagtgtgaggaccccttgaggtgtcctgttcaggcctgtgccaactctccaggatca
tacaagtgtgtgtcttgcccgccaggctttggcctgctcaacgaacaatgctcagacgtt
gacgagtgccatcagacccccagcctttgcaccaatggtcgttgtgagaacactcctggg
agctacaggtgtgtttgccacacaggatacaaacgacaaggcaagacctgcacagatgtg
gatgagtgtgaggaccctttgaggtgtcctggtcaggcctgtgtcaattctcagggttct
tacaactgtgtgtcctgcacgccaggcttcagcatgatcaatggacaatgctcagatata
gatgagtgtcgtcagacccccagcccatgcaccaccggtcactgcgagaacacccagggt
agctacagctgtgcgtgtctcactggctacagactacacggcgatacctgtacagacgtg
gatgaatgtgcagacccgtcccagtgccctggccaggagtgtgtcaactccctgggctca
tacaagtgtgtgtcctgcaagccaggctttgggctggtcgacagacactgcacagatgtt
gacgagtgcctccgcagccccactccctgcgctaacggccgttgtgagaatacggctgga
agctacaagtgtgcgtgccgatctggcttcaggctacagggcaacacctgcggagatgtc
gatgagtgtgagaacgctctgcagtgtcctggtcggcagtgtatcaactctgagggctcc
ttcatatgtgtagcctgtagcccaggctttgaggctggaaacggacagtgtacagatatc
gatgagtgtcgccagacctccaacctatgtgccaacggtcgctgtgaaaacactccgggt
agctaccggtgtgtttgtcgcaccgggttcacaccgcagggcagcatctgtattgacctg
gatgaatgtgaagacccctcacagtgtcctgggcaacggtgtgtgaattccgaaggctcc
tacaagtgtatcgcctgcaaagcgggccacggcatgcgagatgggttatgcgcagatgtg
gatgaatgccagagccctgacacctgtggtgcagcgaggctgtgcgtgaacacggacggc
tcctaccgctgtgactgtcagccaggctacagaaccgctggcctcggacgccagtgtaga
gacgtcaacgagtgtctagagggggagtactgcttccccaggggagagtgtgtgaacaca
gagggctcctaccgctgtgtgtgctcccagggatacaccaccagcagcgacggcagctcc
tgcctggatgtggatgagtgtgccaggtcaggcccgggggcgtgccaggatggccgctgt
gtcaacacagagggctcctaccagtgccagtgccaagtgggattcaccaccaacccagag
aagacagcctgtctggatgtagatgagtgctcagagggagcagtgtgtcggacacagcgt
tgtgagaacaccgttggctcctaccgttgtatcacctcctgtgagccgggctaccgggtc
acccgcaccggagagtgtgtcgatatcaatgagtgcgctaatgagaccgtatgcggggag
catgcgttctgccagaacctaattggaacataccagtgcatgtgtgaccagggctacaca
gccaccagcgatgggaagggatgtgtggatgaaaacgagtgtgagactatgcagggcgtg
tgtggcgcggcgcactgtgagaatgtggatggctccttcatgtgtgagtgtccaggagag
ggggaagagtttgatacgcgctcaggacagtgcctcagcacgccccgaccaggtcgtccg
gcgtaccctggcggctcctcctcttcttcgtcttcctccaccaccggtctcggtccccag
cgtcagcccgatgcgtcccagctgccccctgcccggcctggcgagttcagggagtgttac
tacagcaccggggagcagagctcgtgcagcgtcctggcccgcaacaccacacagcaggag
tgctgctgcaccgtgggccagggctggggcatgggctgccagtacgacccctgtcctccg
ctaggcacagccgagcaccaggcgttgtgccccagcggacgaggatatgttaccgggcca
ggagcatttagctacaaagatgtggatgagtgtaagctgttccaccctgaggtgtgtaag
agcggtgtatgtgtcaacaacatccctggctactcctgctactgcaccattggctactac
tacgacgacgtgtttctggagtgcatcgatgttgatgagtgtgaggcaggggaggacagc
tgtccagggggaatctgcgtcaacatattaggctcacacttctgtacctgcgagcctcct
cttgtgttggacgacactcagcgcagctgtgtcaactccactgacctcgccgtggatgag
aacctatcgttctgctggcagtttgtcacagcagacctggtgtgtcagagccccctgctg
ggtggacaggtcaccttcacagagtgctgctgtctgtatggagagggctggggactgcaa
tgtgctctgtgtcctgccagagactcagaggactatgcggctcgctgtaacgtcttcctg
gggcccccagagtttcctccccccttccctgacccctacgggccggacccagggccagga
cccggcagaggaggagagggaggaggaggagtggggtatcgcgtgcccaatggaccggac
tccttcccagaccccatcccccgcaggcctgagtacccccagcctgactatgacgactac
acaccagcgggaggcagcaggtctggcttcagaagcagaacgcccagcaccttcagcgtc
ccagagagcccgtacagacggccctcaggatacattcccgagcggtactatgacgaggac
gactacggcccgcctgacgctcctccgagaccccatttccggaccctcccagaccctcgt
tctgagcttgcctttggggcgcgaccccctccccccatccgagagggcctccctctgagt
ctggcccccctctcggacagtgacccctacagtgaggaggaggaggaggaggggccagaa
ccctggcgtgtgggaccccctttccctccgttccctgacagacaggggccaggtggtggt
ggtggcccacggagagtctatgagagacgatatgagccgtatgcaggcctgagcacagag
gactgtgggatactgcacggctgtgagaacggcaggtgtatccgggtggcggagggatac
acgtgtgactgctacgagggctacgagctggacatgacctccatggcctgcatagacatc
aatgagtgtgtggatcttgacaacgcgtgtgtgaacggccgatgcatcgacacagacggc
tcctatcgctgcgtgtgccaccggggctacgtcatgtcccggcggcccaaccactgtgtg
gcagcataa
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