Oncorhynchus gorbuscha (pink salmon): 123993048
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Entry
123993048 CDS
T07892
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 homolog isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
123993048
Cell adhesion molecules [BR:
ogo04515
]
Immunoglobulin superfamily
DSCAM family
123993048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
V-set_CD47
Ig_6
Interfer-bind
fn3_2
DUF1461
Motif
Other DBs
NCBI-GeneID:
123993048
NCBI-ProteinID:
XP_046150755
LinkDB
All DBs
Position
LG13:48402350..48570186
Genome browser
AA seq
2077 aa
AA seq
DB search
MWLVTLFLLYSFQEVNSEDVVSTRLYFVNASLQRVTFSSSVGVSLPCPAGGAPHAVLRWY
LATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSYIHDNDYFCTAENQAGKIRSPSIRIK
AVFREPYTVRVADQRSMRGNVAVFKCLIPSAVQEYVSVVSWEKDTVSMVPGNRFFLTSFG
ALYISEVQKEDALSTYRCITKHKYSGETRQSNGARLSVMDPTESTPSVLDSFQSGEVQVG
HNVELPCIASGYPNPTIRWLKDGRPLPADSRWTRRLTGLTVSDLRLGDSGNYICEVTNSF
GSKEVTGHLNVIEPLRVTLSPKNLKTGISSTVILSCSVQGSPHFTLSWYRNTEPVLPDQH
FSIQGAHNETLFISAAQKRHSGAYQCFATRKGQTAQDFSIILLEDGTPRIVSSFSERVVV
PGEPFSLMCAAKGAPPPTITWTLDDEAVARDPSRVRASQYTLSDGSTVSHVNVSSPEIRD
GGVYRCAARNSAGSAEYQARINVRGSPRIRDMRNITAVAGRNTFINCRVIGYPYYSIKWY
KEGLLLPDNHRQVVYENGTLKLSDVQKVLDEGAYLCSVLIQPQIFISQTVYVQVKVPPLI
QPFDFPPTSIGKLMYIACVVSSGDMPIHITWRKDGQEVAPSSGVNIETKEYMSSLQIGKV
SLKHNGNYTCIASNDAATVSSERQLTVTVPPQFVVQPNNQDGIYGKAGVLNCSVDGYPPP
KVMWKHAKGTGNPQQYHPVPLTGRIQIMGNGSLLIRHVLEEDRGYYLCQASNGVGSDISK
SMVLTVKIPAMITSHPNTTMAIKGQIKELNCTARGEWPIIIRWERGDTVIDPDRNPRYAI
TTSPNEKSDEVLSTLKLKPAERGDSVFFSCHAINSYGEGRGLIQLTVQEPPDPPELEVRE
VKDRSMNLRWTQRFDGNSIITSYDIEYKNKTDPWELKHATRKISPTNNQANIVDLHPAQV
YSIRMFSYNKIGHSQASKELTISTEEAQPDGPPMEVFLQPMTSQSIRVTWKAPRKELQNG
VIRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPS
SSEINATTLEDVPSQPPQTVRAISVTSDEAVITWAEPPRLTLHGVLKGYRVVFWSLFPDG
EWGEMQNITTTREQVELRGLEKFTNYSVQVLAYTQAGDGVRSNVLYIQTREDHPGPPAGI
KAVPSSTSSVVVSWLPPHKPNGIIRKYTIYCSSPGSGQPAPSEYEANPELLFYRVTHLNR
GQQYLIWAAAVTTAGRGNISDKVTVEPAGKAPAKILSFGGTVTTPWMKEVRLPCSSVGEP
TPTIKWTKDSEDTAIPVTLDGQRLIMVNGTLVLRSVKAEDSGYYTCTATNTLGFDTIIVN
LLVQVPPDQPRLTVSTTSPTSITLAWIPGDNGGSSIRGFVLQYSVDNMEGWRDVFISSSE
RSFKLDNLRCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPQFNKEQPVFTHVNSTHAR
LNLQGWASGGCPITAVLLEFRPKGNWAWQNVRTNATADVFLAELREATWYELKMKACNSA
GCGNQSSQFATLDYDGIGTIPPIKSARPEGDDVKKLFSIGCPVILVTLVLALLFIIRKKR
KEKRLKRLRDAKSLAEMLISSKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQI
GEDKATIPVTDTEFSQNVNPQSFCTGVSVHHPALIQNTGPLIDMSDIRPGTNPVSRKSVK
SAHSTRNRYSSQWTLTKCQSSTPARTLTSDWRTVGSQHGITVTESDSYSASLSQDTDKGR
NSMVSTESASSTYEELARAYEHAKLEEHLQHAKFEITECFISDSSSDQMTTGTNDNGDSM
TSMSTPSETGLCRFTASPPKPQEYDRGRPTNVAVPIPHRANKSEWTGKSDYCNLPLYMKT
DPFFRKQSELHDPCPVVPPREAPIRSLAQRAYHTQGRHMTLDSSKQQQALTVGHAGLAGL
SASGGASGSGGGVGGATGGPSGGSSTTSLSQRTLTMPGSSSSTAQSTAAAATTSASGGAT
GGDSRDPLLESSSSGLGRLERQKQAAGGAYSKSYTLV
NT seq
6234 nt
NT seq
+upstream
nt +downstream
nt
atgtggctggtaactttattcctgctgtactctttccaagaagtgaacagtgaggatgtg
gtctcgacgcggctgtactttgtaaacgcctccctgcagcgggtgaccttctccagctcg
gtcggggtgtccctgccctgccctgcgggcggcgcaccccatgccgtcctgcgctggtac
ctggccaccggcgacgacatctacgatgtgccccacatccgccacgtgcacgccaacggc
accctccagctctaccctttctcgccctccgccttcaacagctacatccatgacaacgac
tacttctgcaccgcagagaaccaggccggcaagatccgcagccccagcatccgcatcaaa
gcagtgttcagggagccctatacggttcgggtggcagaccagcgctccatgcggggcaac
gtggccgtgttcaagtgcctcatcccctcggccgtgcaggagtacgtcagcgtggtgtcc
tgggagaaagacaccgtctccatggtgccagggaaccgttttttcctgacgtcgttcggg
gccctgtacatatcagaggtccagaaggaagatgccctgtccacctaccgctgcatcacc
aagcacaaatacagtggagagactcgccagagcaatggagccaggctgtctgttatggac
cctacggagtccaccccctcagtgttggacagtttccagtctggagaggtccaggtgggg
cataatgtggagctgccctgcatcgcctcgggctaccccaaccccaccatccgctggctg
aaggacgggcgcccgttgcccgccgactcccgctggacgcgccgtctcacgggcctgacg
gtcagtgacctgcgtctgggcgacagcggcaactacatctgtgaggtcaccaacagcttc
ggctctaaagaggtgaccggtcatctcaacgtcatcgagccgttgagagtgactctgtct
cctaagaacctgaagacgggcatcagcagcacggtgatcctgtcgtgttccgtgcagggt
tctccccacttcaccctgtcctggtaccgcaacacagaacccgtcctccccgaccagcac
ttctccatccagggggcccacaatgagaccctgttcatctccgctgcccagaagagacat
tcgggagcctaccagtgcttcgccacccgcaagggccagacggcacaggacttctccatc
atactgctggaggatggtacgccccgtatcgtgtcctccttcagtgagcgagtggtggtc
ccgggggaacccttctccctcatgtgtgctgccaaaggcgcccctcccccaaccatcacc
tggactctggatgatgaggctgtggccagggacccatctcgggtgagggccagccagtac
acgctgtcggacggctccaccgtgtcccacgtcaacgtcagcagcccggagatccgcgac
ggaggggtgtatcgctgcgccgcacgcaactcggccggtagcgccgagtaccaagcgcgc
ataaacgtaagaggttctcccagaatcagggatatgcgtaacatcacggcggtggctggg
aggaacacctttataaactgccgtgtgattggctatccctactactcaatcaagtggtac
aaggaggggcttctgctgcccgacaaccatcgtcaggtggtgtatgagaatggcactctg
aagctaagtgacgtccagaaggttttggatgagggggcgtacctctgcagcgtgctcatc
caaccacagatcttcatcagtcagaccgtctacgtccaagtcaaagtgccccctctgatc
caaccctttgacttcccccccacctccattgggaagctcatgtacatcgcctgcgtggtg
tcgtctggcgacatgcccatccacatcacctggcgtaaggacggccaggaggtcgcgccc
tcgtccggcgtcaacatcgagaccaaggagtacatgagctcgctgcagatcggcaaggtg
tcgctcaagcacaacggcaactacacctgcatcgctagcaacgacgccgccaccgtcagc
tctgagaggcagctcactgtcacagtgcctcctcagtttgtggtccagcccaataaccag
gatgggatctacggcaaggcgggggtcctcaactgctccgtggacggatacccccctccc
aaagtcatgtggaagcacgccaaaggtacagggaacccccagcagtaccacccagtgcct
ctgaccggtcggatccagatcatggggaacggctccctgctgattcgtcacgtcctggag
gaggaccggggctactacctgtgtcaggcctccaacggggtgggctccgacatcagcaag
agcatggtcctgaccgtcaagatcccagcaatgatcacgtcgcaccccaacaccaccatg
gccattaagggacagattaaggagctgaactgcacagcgaggggggaatggcctatcatc
atccgttgggagcgcggtgacacggtcatcgaccccgaccgtaaccctcgctacgccatc
accaccagccccaacgagaagagtgacgaagtattgtctacgctgaagctgaagccagca
gaacgtggtgattcggtcttcttctcctgccatgccatcaactcctatggagagggacgg
ggactcatccagctcactgtgcaagagcccccagaccctccagagttggaggtgagggag
gtgaaggatcggagtatgaacctgcgctggacccagagatttgacggcaacagcatcatc
accagctacgacattgagtacaagaataagaccgatccatgggagttgaagcatgccaca
cgtaagatctctcccaccaataaccaggccaacatcgtggatttacaccctgcccaagtc
tacagcatccgcatgttctcctacaataagatcggacacagtcaagccagcaaggagctc
accatcagcaccgaggaagcgcagcccgatggtcctcctatggaggttttcctccaacct
atgacctcgcagagcatccgcgtcacctggaaggcccccaggaaggagcttcagaatggg
gtgatccggggttaccagattggttaccgtgagaacgggccgggcagtaacggccagtac
agtatcgttgagatgaaggctacaggggacagtgaggtgtacaccctggacaacctgaag
aagtttgcccaatatggagtggtggtccaggccttcaacagggccggcacaggcccctcc
agctctgagatcaatgctaccacactggaagatgtgcccagccagccgccccagaccgtg
cgggccatctcggtgacatccgacgaggcagtgatcacctgggcggagcccccgcgtctg
acactgcatggcgtgctgaagggttaccgtgtggtcttctggtccctcttccccgacgga
gagtggggagagatgcagaacatcaccacaacccgtgagcaggtggagctgagagggctg
gagaagttcactaactacagtgtgcaggtgctggcctacacccaggctggggacggggtc
aggagcaatgtgctgtacatccagacccgcgaggaccaccctggccccccggctggcatc
aaagctgtgccgtcatccaccagcagtgtggtggtttcctggctacccccgcacaagccc
aatggaatcatccgcaagtacaccatctactgctccagccccggatcgggccaaccagcc
cccagcgagtacgaggccaaccccgagctgctgttctaccgggtcacccacctgaaccgt
ggacagcagtacctcatctgggccgccgccgtcaccaccgccggacgggggaacatcagc
gacaaggtcactgtggagcctgctgggaaggccccagctaagatcctatcgttcggaggt
acagtgaccactccctggatgaaggaggtgaggctaccctgcagctcagtgggcgaaccc
acccccaccatcaaatggaccaaagacagtgaggacacggccatcccggtgactctggac
ggtcagaggctcatcatggtcaatggcacgctggtcctgcgctcggtgaaggctgaggat
tctgggtactacacatgcacggccaccaacacgctgggctttgacaccatcatagtcaac
ctgctggtgcaagttcctccggaccagccccgtctgactgtctccaccacctcccccacc
tctatcaccctggcctggatccccggggacaacggaggatcctccatcagaggtttcgtg
ctgcagtactcggtggacaacatggaggggtggagggatgtgttcatcagttccagtgag
aggtccttcaagctggacaacctgcgctgtggcacctggtacaaggtcaaactggccgcc
aagaacagcgtgggagcgggacgcatcagtgaaatcatcgaggctaagacccacggacga
gagccccagttcaataaggaacagccggtgttcacccacgtcaactctacccacgcccgg
ctcaacctgcagggctgggcgagcggtggctgccctatcacggccgtgctgctggagttc
agacctaagggcaactgggcgtggcagaacgtgcgcaccaacgccacggccgacgtgttc
ctggctgagctccgcgaggccacctggtacgagctgaagatgaaggcgtgtaacagcgcc
ggctgcgggaaccagagttctcagttcgccacgctggactacgacggcataggtaccatc
cctccaatcaagtcagcgcggccggagggcgacgacgttaagaagctcttctccatcggc
tgccccgtcatcctggtcactctggtcctcgccctgctcttcatcatccgcaagaaacgc
aaagagaagagactgaagagactgagagatgccaaaagcctggctgagatgctgatcagt
agtaagaataaccggagctttgacacccctgtgaaagggcccccccagggcccccgactc
cacattgacatccccagagtccagctgctcatcgaggacaaggaaggcatcaagcagatc
ggtgaagacaaagccaccatcccagtgacggacacagagttcagccagaatgtgaatcca
cagagcttctgtacgggcgtgtctgtgcatcaccccgccctcatccagaacaccggccct
ctgattgacatgtccgatatcagaccagggaccaacccggtgtcgaggaagagcgtgaag
tcggcccacagtacgaggaaccgctactccagccagtggaccttgaccaagtgccagtca
tctacgcccgcccgtaccctcacctccgactggcgcaccgtgggctcccagcatggcatc
accgtcaccgagagcgacagctacagcgccagcctctcacaggacacggataaggggcgt
aacagcatggtgtccacagagagcgcatcctccacctacgaggagctggcgcgggcctac
gaacacgccaagcttgaggagcacctgcagcacgccaagtttgagatcaccgagtgcttc
atctccgacagttcctcagaccagatgaccacgggcaccaacgacaacggcgacagcatg
acctccatgagcacgccgtccgagacgggcctgtgtcgcttcaccgcctcgccacccaaa
ccccaggaatacgaccgcggaagacctaccaacgtagccgtgcccatcccccaccgcgcc
aacaagagcgagtggactggcaaaagtgactactgtaaccttcccctttacatgaagaca
gaccctttcttccggaagcagtcggagctgcatgacccgtgcccggtggtgccgccccgc
gaggcccccatccgcagcctggcccagcgggcgtaccacacccagggccgccacatgact
ctggactcctccaagcagcagcaggctctgactgtgggccacgcaggcctggcaggcctc
agcgcctcagggggagcatcagggagtggtggtggtgtaggaggggcgactggagggccg
tctggtggttccagcaccacctccctgtctcagaggactctcaccatgcccggttcctcc
tcttctactgcccagagcactgctgctgccgctaccacctcggccagcgggggagccacg
gggggagactccagagaccctctgctggagagcagctcgtcaggcctgggcagactagag
agacagaagcaggcggctggcggggcctactccaaatcgtatacactggtgtag
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integrated database retrieval system
