Oncorhynchus gorbuscha (pink salmon): 123993098
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Entry
123993098 CDS
T07892
Name
(RefSeq) U1 small nuclear ribonucleoprotein A-like isoform X1
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123993098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogo03041
]
123993098
Spliceosome [BR:
ogo03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
123993098
Complex B
123993098
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
DUF4523
RRM_5
Motif
Other DBs
NCBI-GeneID:
123993098
NCBI-ProteinID:
XP_046150836
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All DBs
Position
LG13:complement(50170876..50173899)
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AA seq
289 aa
AA seq
DB search
MAAPDMRLNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVARSLKMRGQAFVIFK
EVNSASNALRSMQGFPFYDKPMRIGYAKGDSDIIAKMKGTYVERDRKKEKRAKVKGPEAA
GAKKGVPGTPVVPMGPGVPTPMPGMPPMSGAPRMMPMPGQPPYMPPPGMMPPPGMGPGGM
LPGAMPPGGMMPGQMPHAQVAENPPNHILFLTNLPEETNELMLSMLFNQLVPLHFIHPFS
YTPWCSVKNVMFIPPCSVVLEHICSVSNIVFMLTSVCMVRLNILTSIDP
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggctgctccggatatgcgcctcaaccacaccatatacatcaacaacctgaacgagaag
attaaaaaagatgaactgaagaagtcgttgtacgcaatcttctctcagtttggtcaaatc
ctggacattttggttgcccgctccctgaagatgaggggtcaggcttttgtcatcttcaag
gaggtcaacagcgcctccaatgccctgcgttccatgcaggggttcccattctatgacaaa
cctatgcgtattgggtacgccaagggggactctgacatcatcgctaaaatgaagggcacc
tatgtggagcgtgaccgtaagaaggagaagagggccaaggtcaagggcccagaggctgca
ggggccaaaaagggtgtgccagggacccctgtagtacccatgggccctggagttccaaca
cccatgcctggaatgccacccatgagtggagctcctcgtatgatgccaatgccagggcag
cccccctacatgcccccgccaggcatgatgccacctccagggatgggccctggggggatg
ctccctggtgccatgcctccaggtgggatgatgcccgggcaaatgccccacgcccaggtt
gcagaaaaccctcccaaccacatccttttcctcaccaacctcccagaggagaccaacgag
ctcatgctgtctatgctcttcaaccagttagtacctcttcattttattcaccccttctcc
tatactccttggtgcagtgtgaaaaatgtcatgtttattcctccatgttctgtagtattg
gaacatatctgttcagtttccaatatagtgtttatgttaactagtgtttgtatggtgaga
ttgaacatcttgacaagtatagacccttga
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