KEGG   Oncorhynchus gorbuscha (pink salmon): 123993181
Entry
123993181         CDS       T07892                                 
Symbol
rffl
Name
(RefSeq) E3 ubiquitin-protein ligase rififylin isoform X1
  KO
K20804  E3 ubiquitin-protein ligase RNF34 [EC:2.3.2.31]
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ogo04121]
    123993181 (rffl)
Enzymes [BR:ogo01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.31  RBR-type E3 ubiquitin transferase
     123993181 (rffl)
Ubiquitin system [BR:ogo04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   RBR proteins
    123993181 (rffl)
SSDB
Motif
Pfam: RNF34L-like_3rd SAP_RNF34_RFFL FYVE_CARP1-2 zf-C3HC4_3 ARMET_C FYVE_2 Prok-RING_4 zf-RING_5 zf-RING_2 zf-C3HC4_2 HeH FYVE DUF7573
Other DBs
NCBI-GeneID: 123993181
NCBI-ProteinID: XP_046151008
LinkDB
Position
LG13:55353653..55368701
AA seq 367 aa
MWTSCCNWFCLDTATVEESNSSMRHQAYTNSGYSSYPSPPLPEHTCKACGSRFVTLARKH
VCVDCKKNYCGSCSAQLEPRQRLCHTCQRFHGTLFERTELMKLKVKDLRDYLHLHEVSTQ
MCREKEELVELVLGQQTPSSSGPIINPLTQTQTPTVTQHETTPLPAPTTTTTTTTPSTHS
DPTSTDNIPSQPPPTQEGSQTPSVLLPLGPEEPLDTEGDTELQGEPELQSSDTDEVLAPG
RRASLSDLATADDIEALSVRQLKEILARNFVNYKGCCEKWELMERVTRLYHDQKDLQNLV
SSTNDGTDPSGTPGQEENLCKICMDSPIDCVLLECGHMVTCTKCGKRMNECPICRQYVVR
AVHIFRA
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgtggacgtcctgctgtaactggttctgtctggacactgccacggtggaggagagcaac
agtagcatgcgtcaccaggcctatactaactcaggttacagcagctacccatcaccccca
ctcccggaacacacatgcaaagcctgcggaagccgcttcgtcacccttgccagaaagcat
gtatgcgtggactgcaagaagaactactgtggcagttgttcggcccagcttgagccccgg
caacgcctttgccacacttgccagcggtttcacggcacgcttttcgagcgcaccgagctg
atgaagctcaaggtgaaggacctgcgcgactacctccacctgcacgaggtctcaacacag
atgtgccgtgagaaagaggaactggtggagctggtcctgggacagcagacaccatcatcc
tctggcccaatcataaaccctctgacccaaacacagacccccaccgtgacccagcatgag
acaactcctcttccagcccccactactaccaccaccaccaccacaccctccacacactcc
gaccccacctccacagacaatatcccttcacagccgccacccactcaggagggcagtcag
accccgtctgtgttgttgcccttgggtcctgaggagccactggacactgagggagataca
gagctgcagggagagccggagctgcagtcctcagacacagatgaggtgctggcaccaggc
cgcagggcgtcgctgtcagacctggccacggcagatgacatcgaggccctcagcgtccgg
cagctcaaggagatcctagcccgtaactttgtcaactacaagggctgctgcgagaagtgg
gagctaatggagagggtcacccgcctctaccatgaccagaaggacctccagaatctggtt
tcaagtacaaatgacggcacagaccccagtggtacccctggccaggaagagaacctgtgt
aagatctgcatggactctcctattgactgtgtcctgctggagtgcggccacatggtcacc
tgcaccaagtgtggcaagaggatgaacgagtgccccatctgcaggcagtatgtggtgcgc
gccgttcacatctttagagcctga

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