Oncorhynchus gorbuscha (pink salmon): 123993181
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Entry
123993181 CDS
T07892
Symbol
rffl
Name
(RefSeq) E3 ubiquitin-protein ligase rififylin isoform X1
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
123993181 (rffl)
Enzymes [BR:
ogo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
123993181 (rffl)
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
123993181 (rffl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF34L-like_3rd
SAP_RNF34_RFFL
FYVE_CARP1-2
zf-C3HC4_3
ARMET_C
FYVE_2
Prok-RING_4
zf-RING_5
zf-RING_2
zf-C3HC4_2
HeH
FYVE
DUF7573
Motif
Other DBs
NCBI-GeneID:
123993181
NCBI-ProteinID:
XP_046151008
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All DBs
Position
LG13:55353653..55368701
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AA seq
367 aa
AA seq
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MWTSCCNWFCLDTATVEESNSSMRHQAYTNSGYSSYPSPPLPEHTCKACGSRFVTLARKH
VCVDCKKNYCGSCSAQLEPRQRLCHTCQRFHGTLFERTELMKLKVKDLRDYLHLHEVSTQ
MCREKEELVELVLGQQTPSSSGPIINPLTQTQTPTVTQHETTPLPAPTTTTTTTTPSTHS
DPTSTDNIPSQPPPTQEGSQTPSVLLPLGPEEPLDTEGDTELQGEPELQSSDTDEVLAPG
RRASLSDLATADDIEALSVRQLKEILARNFVNYKGCCEKWELMERVTRLYHDQKDLQNLV
SSTNDGTDPSGTPGQEENLCKICMDSPIDCVLLECGHMVTCTKCGKRMNECPICRQYVVR
AVHIFRA
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgtggacgtcctgctgtaactggttctgtctggacactgccacggtggaggagagcaac
agtagcatgcgtcaccaggcctatactaactcaggttacagcagctacccatcaccccca
ctcccggaacacacatgcaaagcctgcggaagccgcttcgtcacccttgccagaaagcat
gtatgcgtggactgcaagaagaactactgtggcagttgttcggcccagcttgagccccgg
caacgcctttgccacacttgccagcggtttcacggcacgcttttcgagcgcaccgagctg
atgaagctcaaggtgaaggacctgcgcgactacctccacctgcacgaggtctcaacacag
atgtgccgtgagaaagaggaactggtggagctggtcctgggacagcagacaccatcatcc
tctggcccaatcataaaccctctgacccaaacacagacccccaccgtgacccagcatgag
acaactcctcttccagcccccactactaccaccaccaccaccacaccctccacacactcc
gaccccacctccacagacaatatcccttcacagccgccacccactcaggagggcagtcag
accccgtctgtgttgttgcccttgggtcctgaggagccactggacactgagggagataca
gagctgcagggagagccggagctgcagtcctcagacacagatgaggtgctggcaccaggc
cgcagggcgtcgctgtcagacctggccacggcagatgacatcgaggccctcagcgtccgg
cagctcaaggagatcctagcccgtaactttgtcaactacaagggctgctgcgagaagtgg
gagctaatggagagggtcacccgcctctaccatgaccagaaggacctccagaatctggtt
tcaagtacaaatgacggcacagaccccagtggtacccctggccaggaagagaacctgtgt
aagatctgcatggactctcctattgactgtgtcctgctggagtgcggccacatggtcacc
tgcaccaagtgtggcaagaggatgaacgagtgccccatctgcaggcagtatgtggtgcgc
gccgttcacatctttagagcctga
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