Oncorhynchus gorbuscha (pink salmon): 123993265
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Entry
123993265 CDS
T07892
Name
(RefSeq) homeobox protein CDX-1-like
KO
K09312
homeobox protein CDX1/4
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
123993265
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
123993265
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
MS_C
Homeobox_KN
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
123993265
NCBI-ProteinID:
XP_046151153
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Position
LG13:62261146..62268083
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AA seq
254 aa
AA seq
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MYVSKNTGMYTGMYSNSVGHPTQPLNSQNFMQYTDFTGYHHVTGISDPHAQTTGVWNPAY
LAGPREEWSPYGQSVDFHGSSPGTEQIHFSSPDVTSILPTGPGTLPSLNSPAGQYSPDSE
RRNSYDWIRHNVHSSSTGGKTRTKDKYRVVYTDQQRLELEKEFQYSRYITIRRKTELALG
LSLSERQVKIWFQNRRAKERKITKKKIQLSQQTSKTTTTLTFTPSCLTDPSNGSMATSSS
LLSETISMTIKEEY
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtgagtaaaaacaccggaatgtacaccggaatgtactcaaattctgtgggacac
ccgactcaacctctgaatagtcagaacttcatgcaatatacggatttcaccggttatcat
cacgtcacaggcatcagtgacccacatgcccagacgacaggtgtgtggaaccctgcttac
ttagcaggtccgcgggaggagtggtcaccgtatggccagagcgtggacttccacggttcg
agcccaggtacagaacagatacatttcagttccccggatgtgacatccatcctgcctacg
gggccgggtactcttccgtcactcaactcccctgccgggcagtactctccagactcagag
agaagaaactcatacgactggatcagacacaatgtacattcatccagtacaggagggaag
acgcggaccaaggacaagtacagggtggtgtacacagaccagcagcgcctagagctagag
aaggagttccagtacagccggtacatcaccatcaggaggaagacagagctggccctgggc
ctcagcctctcagagagacaggtaaagatctggttccagaacaggagagccaaggagagg
aaaattaccaagaagaagatccagctgtcccagcagacctctaagactacaactaccctg
acctttaccccatcctgcctgactgaccccagcaacggctccatggcaaccagctccagc
ttgttgtcagagacaatatcaatgactatcaaagaggagtactga
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