Oncorhynchus gorbuscha (pink salmon): 123993319
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Entry
123993319 CDS
T07892
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit-like
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04010
MAPK signaling pathway
ogo04210
Apoptosis
ogo04218
Cellular senescence
ogo04620
Toll-like receptor signaling pathway
ogo04621
NOD-like receptor signaling pathway
ogo04622
RIG-I-like receptor signaling pathway
ogo04623
Cytosolic DNA-sensing pathway
ogo04625
C-type lectin receptor signaling pathway
ogo04920
Adipocytokine signaling pathway
ogo05132
Salmonella infection
ogo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
123993319
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
123993319
04218 Cellular senescence
123993319
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
123993319
04621 NOD-like receptor signaling pathway
123993319
04622 RIG-I-like receptor signaling pathway
123993319
04623 Cytosolic DNA-sensing pathway
123993319
04625 C-type lectin receptor signaling pathway
123993319
09152 Endocrine system
04920 Adipocytokine signaling pathway
123993319
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
123993319
09171 Infectious disease: bacterial
05132 Salmonella infection
123993319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
123993319
Transcription factors [BR:
ogo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
123993319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
123993319
NCBI-ProteinID:
XP_046151289
LinkDB
All DBs
Position
LG13:complement(64570934..64611117)
Genome browser
AA seq
913 aa
AA seq
DB search
MAEEEAYLPHPQYYDIEPIWDPLNFTPMSLTNSLRTADGPYLEIIEQPKQRGFRFRYGCE
GPSHGGLPGASSEKNRKSYPQVKICNYQGLARVVVQLVTNSKDAHLHAHSLVGKQCDKGI
CITDQQPKDSSISFPNLGILHVTKKNVIKTLEDRMTEAYRVGYNCGIVIHPEIDAIQGEV
RIPRELTDHQRSMICSAATKQAKEMDLSVVRLMFTAFLPDSDGGFSRRLDPVISDPIFDS
KAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQVRFYEDDETGLTWEAFGDFSP
TDVHRQFAIVFKTPKYRDLNLQKPTSVFVQLKRKSDNETSEPKPFTYHPQIIDKEEVQRK
RQKTLPNFQDYSGQGGAGGMYRGPGGGGSATGGGPGSGGGGYFQAYSTYNNYGTGYSAGF
SPGMSGGGAGIKHATQGRAEDSGDDCDMGDDPSSGAVVADRAQSEEDASAGETKCMLEAR
LVDVAERQVEALFHYAVTGDVHYLLAPQRHLMTAQDENGDTGLHLGVIHSQTDAVRSLAQ
VLSALPGEEVLNMRNDLYQTPLHLAVITQQKEAAEALVLAGADVTLSDRHGNTALHLATQ
QKEGGMVGFLLRHREVVELVDLPNTAGFCSLHLAVLANSLCSLRDLLVSGGNVEGQERSC
GRTALHLATELDNVSLAGCLLLEGNADVDCCTYNGSSPLHIAAGRGSVKLTALLMAAGAN
PHKENFEPLFFREDDCCVDEEEEQDEGYIPGMTPLNMAATPEVLDILNGKEYKPETTIPV
FIPPQGDMRSLGSDTKRALCQALECQGGSWESLANTLGLGILNSAFRLSPSPASTLLDSY
EVSGGMVMDLLEGLRMVENSTALTVLQGALCETEQAPLAPRSTTELLGRVQDLKLDGQED
SGVCDSGVELSTA
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaggaggcttacctccctcacccacagtactatgacatagagccaatatgg
gatcctctgaattttactcccatgtcactcaccaactcactccggacagcagatggaccc
tacctcgaaatcattgaacagcctaaacagcggggcttcaggttccgttatgggtgtgag
ggaccctctcacggtgggcttccaggggcctccagtgagaagaacaggaagtcatatccc
caggtcaagatctgtaactaccaggggttggcacgtgtggtggtacagctggtgaccaac
tctaaagacgcccacctccatgcccacagtttggtgggcaagcagtgtgacaaaggcatc
tgcatcacagaccaacagcccaaagactccagcatcagtttccccaacctgggaatcctc
catgtgaccaagaagaatgtgattaagacactggaggaccgcatgactgaggcctacagg
gtgggctacaactgtggcattgtcatccaccccgagatagacgccatccagggagaggtt
cgcatcccccgggagctcactgatcaccagagaagcatgatctgcagtgcagcaaccaag
caggctaaagagatggacctaagcgtggtgcgcctcatgttcacagccttcctcccagat
agtgacgggggcttctcccgtagactggaccccgtcatatcagaccccattttcgacagc
aaagctcctaatgcatccaacctgaagattgtgcggatggaccgcacagctggctgtgtg
acaggaggagaagaggtctaccttctctgtgacaaggtccagaaagatgacatccaggtg
cgcttctatgaggatgacgagacagggctgacttgggaggcctttggggacttctccccc
actgatgtccatcgacagtttgccattgttttcaagacccccaaatacagagacctgaac
ctccagaagcccacctcagtgtttgtgcagctgaagcgtaaatcggacaacgagacgagc
gagcccaagcctttcacctaccacccacagatcatagataaggaagaggtgcagaggaaa
agacagaagaccctgcctaatttccaggactacagcggccaaggtggagcagggggcatg
taccggggaccagggggaggaggctccgctacagggggaggacccggctcagggggagga
ggttacttccaggcctattccacctacaataactacggcaccggctatagcgctggcttt
tcccctggcatgagtggtggtggggcgggcattaaacatgctacacagggcagagcggag
gacagcggtgatgactgcgacatgggcgatgacccgtcctctggggcagtggtggcggac
cgagcccagtcggaggaggatgcctctgctggggagacaaaatgcatgctggaggctagg
ctggtggatgtggctgagaggcaggttgaagcactcttccattacgccgtcactggagac
gtccactacctgctggctccacagcgccacctcatgacggctcaggacgagaacggcgac
actggtctccatctaggggtgatccacagccagacagacgcagtcaggagtctagcccag
gtgctctctgccctgcctggagaggaggtcctcaacatgaggaatgacctctaccagact
cctttgcacctagcggtgataacccagcaaaaggaggcggccgaggccctcgtattggct
ggggctgatgtcactctgtctgatcgccacggaaacacagctctacacctggccactcag
cagaaggagggagggatggtgggatttctactaagacacagagaggtggtggaactagtg
gacctccccaacacagcaggattttgctccctccacctggctgtgctggcaaatagccta
tgttccctcagggacctcttggtgagcgggggcaatgtggagggccaggagaggagctgc
ggccgcacggcactccacttggccactgagctggacaacgtctccctggcaggctgcctg
ctactggaggggaatgctgatgtagactgctgcacctacaacggctccagccctctccac
atagcagcaggccggggctctgtcaaactgaccgctctcctcatggctgcaggtgccaat
cctcacaaagagaactttgagcccctgttcttcagagaggatgactgctgtgtggatgag
gaagaggagcaggatgaaggctacatcccagggatgactcctcttaacatggctgccact
cctgaggtgttggacattctgaatggcaaagagtacaagccagagaccaccatcccagtc
ttcatcccccctcaaggtgacatgcggagcctcggctcagacacaaagcgggcattatgc
caggcccttgagtgccagggggggagctgggagagcctggcaaacacgctggggctgggc
atcctcaacagcgccttcagactcagcccctcccccgccagcacactgctggacagctac
gaggtgtccgggggaatggtcatggaccttttggagggactcaggatggtggagaactcc
accgcgttgacagtcctgcagggggcactgtgtgaaacggagcaggctcctctagctccc
cgaagcaccacagagctcttaggacgtgtccaggatctgaagctggacggacaggaggac
agtggcgtgtgtgacagtggggtggagctctccacagcgtga
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