Oncorhynchus gorbuscha (pink salmon): 123993368
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Entry
123993368 CDS
T07892
Name
(RefSeq) transcription factor Sox-19a-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
123993368
Transcription factors [BR:
ogo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
123993368
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
HTH_24
Motif
Other DBs
NCBI-GeneID:
123993368
NCBI-ProteinID:
XP_046151408
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All DBs
Position
LG02:complement(59312573..59314993)
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AA seq
322 aa
AA seq
DB search
MVNMYNIIEHQLKSSVPSHHPGTGMPPANGVGGHEGGHTGSKLPTIQPDPMDKVKRPMNA
FMVWSRGERRKMAQENPKMHNSEISKRLGVAWKSLTDAEKRPFIDEAKRLRAVHMKDYPD
YKYKPRRKTKPMPKNNTLAAQYQMSAGNHLLSASAAQGQVGNPRMDAYGWGHTGGYTAAM
QSEALGYSQQLHRYDLSALQYQSSMAQAQAYMNGANAYSPMSYNSSPQQVSPVMSMVKQQ
SDGHSMSPSPTGPHSPLQQHHHQAHQQHQNQRGIQVQGDHLRDMISMYMPGGDASEAQRG
YSVSAANIQQHYLGGSAPLTHL
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggtaaatatgtataacattatagagcaccaactcaaatcctctgttccttcacatcat
cctggaacaggaatgccacctgcgaacggagtaggggggcacgagggcggccacacaggt
tccaaattaccgacaatccaacctgacccaatggacaaagtcaagcggcccatgaatgcc
ttcatggtctggtctcgcggtgagcgacggaaaatggctcaggaaaatcccaaaatgcac
aattctgagatatccaaacggctgggtgtcgcgtggaaatctctaacagacgccgagaaa
aggcccttcattgacgaggctaagcgcctccgcgcggtgcacatgaaggattatccggac
tataaatacaagccccgtcgtaaaaccaaaccgatgccgaagaacaatactctagccgcc
cagtatcagatgtcggccggtaaccacctgctgagtgcgtccgcggctcagggacaagtt
ggaaaccccagaatggacgcatatggctggggccacacagggggctacactgcggcgatg
cagagcgaggcgctcggctacagccagcagcttcaccgctatgacctgtcagcacttcag
tatcagtccagcatggcccaggcccaagcctacatgaatggtgccaacgcatacagcccc
atgtcctacaacagcagcccccagcaggtcagcccagtgatgtccatggtgaagcagcag
tctgatggccacagcatgtccccatcccccaccgggccccacagccccctgcagcagcac
caccaccaggcccaccagcagcaccagaaccagcgtggaatccaggtccagggagaccat
ctcagggacatgatcagcatgtacatgcctgggggagatgcctcagaggcccagagaggg
tactccgtctctgcagcaaacatccagcagcattacctgggagggtcagctccactcacc
cacctttga
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