Oncorhynchus gorbuscha (pink salmon): 123993487
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Entry
123993487 CDS
T07892
Name
(RefSeq) TBC1 domain family member 9B-like isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
123993487
Membrane trafficking [BR:
ogo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
123993487
Endosome - Golgi transport
Rab GTPases and associated proteins
123993487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_5
EF-hand_6
EF-hand_7
EF-hand_8
Ric8
MgtE_N
Motif
Other DBs
NCBI-GeneID:
123993487
NCBI-ProteinID:
XP_046151633
LinkDB
All DBs
Position
LG13:complement(72580586..72632486)
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AA seq
1208 aa
AA seq
DB search
MWITPEEVLLANALWVSERANPFFILQRRKGHGKGGGITGLLVGTMDVVLDSSARVAPYR
ILHQTGDSQIFCSIACGSSRKEITEHWEWLETNLLQTLSIFDNNEDITTFVKGKISGIIA
EENKSKAALEDEDSGKFREAELKMRKLFGMPGEEKLVNYYSCSYWKGRVPRQGWVYLSVN
HLCFYSLLLGKEVTLVVQWTEVTRLEKNATLLFPESVRVSTRHTEHYFSMFLNVNDTFKL
MEQLATIAMRQLLDNEGFAADHSLPKACKTLKNVSALKRNLDARAKNERYRALFRLTQDE
RLDGHTDCTLWTPFAKMHIVGQLFVSNNYICFCSREEDLCQLIIPLREVSIVEKADSSSV
LPCPVSISTKNKMTFLFANLKDRDFLVQRISDFLQRTPESGHSGSPSPSTTPLSSSLPTP
TGAAGEPSQRRHYSPSLPTATQSLLRIYQKHAPEEHGPKATKEELWNIHFLEFGRGVCMY
RTSKTRELVLNGIPESLRGELWLLFSGAQNEMDTHPGYYAERVEQAMGRCTLATEEIERD
LHRSMPEHQAFQNEMGIAALRRVLTAYACRNPGIGYCQAMNIVTSVLLLYCTEEEAFWLL
VALCERMLPDYYNTRVVGALVDQGVFEELTRACLPFLYEHMQELGVISTISLSWFLTLFL
SVMPFDSAVLLVDCFFYEGIKVIFQVALAVLHANMDTLLDCNDEGEAMTILGRYLDNVVN
KQTVSPPIPHLHALLTSGDEPPPQIDVFQLIKSSCEKFGSLRADVIEQMRFHQRLKVIQS
LEDTAKRSVVRAIMTDSAFSIEELEELYVHFKAKHIISCYWGASTTAAERHDPSLPYLEQ
YRIDLGQFCQLFGALGTWLCGTHTATLAARLFRLLDLNKDGLINFKEFVTGLSGMYHGDM
TEKLKLLYNLHLPPALCPEEAESALEATQFFTDDTPQEPPFLSDLDFLVQEVTSGEEVKE
AEDALGSGDAEEKKEVKDYKYYLRMWAMENEPKKETIKDLRRMNQEQFIELCKTLYNMFS
EDPLEQELYHAIATVASLLLRIGEVGKKFTNNGANKPTDTINAQAPAPAAELLQPEKEEP
NGESSSGQSLVCRALAEAQLETPPQQTSDEEVKDDTSVSSYSMVSTGSLQCEDIADDTVL
IGCAGDQQRRGSILDGDWSITFEQVLASMLTEPPLVDYFEKKGEIQARMAICKMQRRVER
QVSSSSDH
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgtggataaccccagaggaggtgttgcttgccaacgctctgtgggtgagcgaaagggcg
aaccccttcttcattctccagaggagaaagggccatggcaaaggagggggcatcactggc
ttgttggtgggcaccatggatgttgtcctggactccagtgccagagtggctccctatagg
atcctgcaccagacaggggactcacagatcttctgcagcatcgcatgtggctcctcccgg
aaggagatcacagagcattgggagtggctggagaccaacctcctccagacgctctccatt
tttgacaacaacgaagatatcaccaccttcgtcaaggggaagatctcgggcatcatcgcc
gaggagaacaagagcaaggctgccctggaggatgaggactctggcaagttccgtgaggct
gaactgaagatgaggaagctgtttggcatgcccggtgaggagaagctggtcaactactac
tcctgtagctactggaagggccgtgtgccccggcagggctgggtctacctcagcgtcaac
cacctctgcttctactctctcctcctggggaaagaagtgaccctggtggtgcagtggacg
gaggtcacccgcctagagaagaacgccacgctgctgttcccggagagtgtgcgggtgagc
acgcggcacacggagcactacttctccatgttcctcaacgttaacgacaccttcaagctc
atggagcagctggccaccatcgccatgcgccagctgcttgacaacgagggcttcgccgcc
gaccactcgctgcctaaggcctgcaagacgctcaagaatgtctcggcactgaagaggaac
ctggacgcacgggccaagaacgaacgttaccgggcgctgttccgcctgacccaggacgag
cgcctggacggacacaccgactgcacgctgtggactccctttgccaagatgcacatcgtg
ggccagctgtttgtctccaacaactacatctgcttctgcagccgtgaggaggacctctgt
cagctcatcatccccctcagagaggtatccattgtggagaaggcagacagcagcagcgtc
ttgccctgccccgtgtccatcagcaccaagaacaagatgaccttcctcttcgccaacctc
aaggaccgcgacttcctggtccagcgcatctccgacttcctgcagcgcacccctgaaagt
ggccattcgggttctcccagccctagtacaacccctctctcctccagcctccccacaccc
actggtgcagcaggggaaccgtcccagaggcgccactacagccccagcctgccaacagcc
actcagagcctgctccgcatctaccagaagcacgccccagaggaacacggacccaaagct
acaaaggaggagttgtggaacatccacttccttgagtttggcaggggtgtgtgtatgtac
cgtacctccaagaccagagagctggtgctcaatgggatccctgagagcctccggggggag
ctgtggctgctcttctcaggagctcagaatgagatggacacccaccctggctactacgct
gagcgggtggagcaggccatgggccgctgtaccctggccacggaggagatcgagagggac
ctgcaccgctccatgcctgagcaccaggccttccagaatgagatgggcatcgctgccctc
cgcagggtcctcaccgcctacgcctgccgcaaccctggcataggatactgccaggcgatg
aacattgtgacgtcggtactgctgctgtactgtacggaggaggaggccttctggcttttg
gtggctctgtgtgagaggatgctgcctgactactacaacaccagggtggtgggtgctctc
gttgaccagggtgtgtttgaggagctgacacgcgcatgcctccctttcctctacgagcac
atgcaggagctgggagtcatctccaccatctccctctcctggttcctcaccctgttcctc
agcgtcatgcccttcgacagcgccgtgcttctggttgactgcttcttctacgagggcatc
aaggtcatcttccaagtggcactggccgtgctgcacgccaacatggacaccctactggac
tgcaatgacgagggagaggccatgaccatccttggacggtatctggacaatgttgtcaac
aagcagaccgtgtctccgcccattccccacctccacgccctgttgaccagtggcgatgag
ccgccgcctcagattgacgtgttccagctcatcaagtcatcctgtgagaagtttggtagt
ttgcgtgctgatgtcatcgagcagatgaggttccatcagaggttaaaggtcatccaatcg
ctggaggacaccgccaagaggagcgtggtaagagccatcatgacagactcagccttcagt
atcgaggagctagaggaactctatgttcacttcaaggccaagcacataattagctgctac
tggggggccagcaccacagcggcggagcgccacgaccccagcctgccctacctggagcag
taccgcattgacctgggacaattctgccagctgttcggggccctgggaacctggctctgt
gggacgcacaccgccacgctggccgcacgcctcttccgcctgctggacctgaacaaggac
ggcctcatcaacttcaaggagtttgtcactggtctgagtgggatgtaccacggagacatg
acagagaaactcaagttactgtacaatcttcacctgccgccagcattgtgtccagaggag
gccgagtcggcactggaagctacacagttcttcactgatgacactccacaggaacctccc
ttcctgtctgatctggacttcctggtgcaggaagtgacctcaggagaggaggtgaaagag
gctgaggacgcattgggaagcggagatgcagaggagaagaaagaggtgaaggactataag
tactacctgcggatgtgggccatggagaatgagcccaagaaggagaccattaaagacctt
cgcaggatgaaccaggagcagttcatagagctgtgtaagaccctgtacaacatgttcagc
gaggacccactggagcaggagctctaccacgccatcgccactgtggccagcctgctgctg
cgcatcggagaggtgggcaagaagttcaccaacaacggcgccaacaaaccaactgacacc
atcaacgcccaggctcccgcccccgctgctgaactgctccaacccgaaaaagaggagccg
aacggggagagcagctcagggcagtctctggtctgcagggccttggcggaggcccagctg
gaaacgccgcctcagcagacgtcggacgaagaagtgaaggatgacacgtcggtctcgtcc
tactccatggtgagcacaggttctctgcagtgtgaggacatcgccgacgacacagtcctg
attggctgcgccggcgaccagcagcggcggggaagcatattggatggcgattggtccatc
acctttgagcaggtgctggcgtcgatgctcaccgagccgcccctggtggactactttgag
aagaagggagaaattcaggcaaggatggctatctgtaagatgcaaaggagagtggaaagg
caggtgagctcgtcaagcgaccactaa
DBGET
integrated database retrieval system
