Oncorhynchus gorbuscha (pink salmon): 123993529
Help
Entry
123993529 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: LIM and calponin homology domains-containing protein 1-like
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
123993529
Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
123993529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
123993529
NCBI-ProteinID:
XP_046151733
LinkDB
All DBs
Position
LG13:complement(76054775..76206462)
Genome browser
AA seq
1306 aa
AA seq
DB search
MASPAADRGQPHQRHPLSESASEPAFLEAQKWIEAVTGRCFNDKDFRGGLENGILLCELL
SSIKPGLVKKINRLPTPIAGLDNLSVFLRGCEELGLKGSQLFDPGDLQDISTRPNTKVAD
CSRKLKNVLITIYWLGRAANSCTSYNGPTLDLKEFEGLLSQMRKEAEDTESPQRSIRDSG
YIDCWDSERSDSLSPPRHGREDSFDSLDSFGSRSRQTPSPDVVVARGIGSDGRGSDSESD
AGPHGGRKLPDVRKDDMLARRTSVSEPRVMVPFNQYLPNKSNASGYVPTPLRRKRGDHES
REEGSGGGGGSRKSWSTATSPIGGDIPFSSPVRSCSEELYRPSSLTTSPMTTSIIVTSPL
SPRTSLDTSRKFPPMIYREKAGQKKVGLSISLATDTGRNDDVWARRALTSPKHGGTTGPN
QFLPVPSAGATTTLTITCQGRMGKSEVEGREGNKPAVEKCPSWLDDDLPPIFSHRAASVS
DDPESVSMIDMRCEEDAILPHHSQVRHELMHNQYNMMKEEEDHWQDDLARWKSRRRSVSQ
DLIKKEEERKMMEKLMTGEGGAISQRRKSIKTYREIVEEKERRENDLREAYRLARTPEEA
ALVLHRYAQRFTISEAVLERLQLPKLLDRSISEDPTATTNTRLTLTPTSCSPTPTSPEED
TNGPLKYLRQQSLPAPKFTATVEAQVVGFPQGLSHRPQIRSRKPEPNPSIRAVSPKSVPL
LMPKPYNQPKGMQMLVGPRPGKVDGLLRVNGDMGNDEVTTPESEGRTSPLRFYPSPALPT
ASSDGSDTHPCEATPPPTHSPSPRASLLPAMPEVAQCGTSTGTAVTSSSVPGESDAQKKD
NAQESTPPSRPTSLPSELQSTECLVEAGGRSAAGPLGEEPNTTETAVQPSPATESQQAPK
EQTEVCMNATATRQNTTILRPVLSEHATQQAQPMTAPVSEPSLEVSRRADEVATLADPGP
VRNKPPCEAPTTEGAEQERGTAAVTQVSSPVVAQAKRGDRWSWDPNEERKRQERWQQEQE
RMLQEKYQHEQXKLKQEWERAQREVEDEERRYHEEERRILEETVAPLTPLSSTLPSPIRG
DTPAPMDPQDTIVRSLADWERKQELLERQGGNTERVVWKGQDNDRSSDISTASRDESLKT
AVSSISQNSSQADKLTQSLQNGQNAPPTMAVPQPPNKKQNTEVLLDCTKPRQQAPSRDRR
CGSIESMGPSPSNSPTTCPSDMPQSPNRSVSGKKLCSSCGHPLGKGAAMIIETLGLYFHI
QCFKCGVCKGQLGDTSTGTDVRIRNGLLNCHQCYIRSRSAGQPTTL
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtcccgctgcagatagaggacaaccacaccagcgacatcccctctccgaatcg
gcctcggagcccgcgtttctagaagcgcagaaatggattgaggcggtcacaggcagatgc
ttcaatgacaaggacttcaggggaggcctggagaatgggatcctgctgtgcgagttgctg
agctccatcaaacctggcttggtgaagaagatcaacagattacccactcccatcgctggc
ctggacaacctgagtgtgttcctgcgtggctgtgaggagctgggactgaagggctctcag
ctgtttgaccctggggacctgcaggatatctccacacgccccaacaccaaggttgccgac
tgcagtaggaaactcaagaatgttctgattaccatatactggctgggccgggctgccaac
agctgcacctcctacaacgggcccacactggacctgaaggagtttgaaggcctgctatca
cagatgcggaaggaggcagaggacacggagagcccccagcgcagcatacgggacagtggc
tacatcgactgctgggactcggagcgtagcgactcgctctccccgcctcgccacggccga
gaggactccttcgacagcctggactcattcggctcacgctccagacagacgccctcgccg
gacgtagtggtcgcccgcggcattggcagtgatggccgtggcagcgactcagagtccgac
gccggaccccacgggggcaggaagctgccagacgtgcgcaaggatgacatgctggctcgg
cggacctcggtgagcgagccccgtgtgatggtacccttcaatcagtacctgcccaacaag
agcaacgccagtggctatgtgcccacaccgctgcgcaggaaaaggggtgaccacgagagc
cgggaggagggcagtggagggggtggaggcagccgcaagagctggagtaccgccacctcg
cccataggaggcgatatacccttcagtagccccgtccgctcatgctccgaggaactatac
cgtccgtcatccttgacaaccagccccatgactacctccatcatcgtgacgagccccctt
agccccaggaccagcctggacacatccaggaagttccctcccatgatttacagggagaag
gcagggcaaaagaaggtggggctgtccatatccctggcgacagacactgggaggaatgac
gacgtatgggctcgccgtgcccttacctcgccaaaacacggcggcaccactggtccaaac
cagttcctgcctgttccttcagccggggcaactaccacgctgaccatcacctgccagggt
cgcatgggcaagtcggaggttgaaggtcgcgagggcaacaaaccggcggtggagaaatgt
ccatcttggcttgacgacgacctcccgccaatattcagtcacagagctgctagtgtatca
gatgacccagaaagtgtgagcatgattgacatgcgttgtgaggaggacgccatcttgcca
caccacagccaggtgcgccacgagctcatgcacaaccagtacaacatgatgaaggaggaa
gaggaccactggcaggatgacctagcccggtggaagagtcgcaggagaagcgtctcccag
gacctgattaagaaggaggaagagaggaagatgatggagaagctgatgacgggtgaaggg
ggggccatctctcagaggaggaagagcatcaaaacctaccgggagattgttgaggagaag
gagcgtcgtgagaacgacctccgcgaggcctaccggttggcccgcacccctgaggaggca
gcgttggtcctccaccgctacgcccagcgcttcaccatcagtgaagcggtgttggagcgc
ctgcaactgcccaaactgctggacaggagcatctctgaggatcccaccgctaccaccaac
acacgtctcaccctcacccccacttcctgttctcccacccccacctccccggaagaagat
acaaatggccccctgaagtacctgaggcagcagtcgctcccggcacccaagtttaccgct
actgttgaggcccaggtggtggggttcccccagggtttgtctcatcgcccccagattcgg
tcgcgcaagcctgaaccaaacccctcgatccgggccgtctcacccaagtctgtgcctttg
ctgatgcccaagccttacaatcaacccaagggcatgcagatgctggtgggacccaggcca
ggcaaggtggacggcttgctgcgagtgaacggcgacatgggaaacgatgaggtcaccact
ccagagagcgagggaaggacctcccctctacggttctacccctcccctgccctccctaca
gcctcttctgatggttctgacacacacccatgtgaggccactcccccacccacacacagc
ccctcccccagggcaagtctattaccagccatgccagaagtggcacagtgtggcacaagc
acaggcactgcagtgacatcatcttcagtgccaggagaaagtgatgcccagaagaaggat
aatgcacaggagtctacaccgcctagccggcccacctcactgccctcggagctgcagagc
acagaatgtcttgtggaggcgggaggcaggtctgctgcaggcccactgggggaggagccc
aacacaacagagactgcagtacagccctctccagctacagagtcacaacaagctcccaaa
gaacaaacagaagtgtgtatgaatgccacagcgactagacagaacaccactatcctccgt
ccagtcctatcagagcacgccacacaacaagctcaaccaatgaccgcaccggtcagtgag
cccagcctggaggtgtctcggagagcagatgaagttgctaccttggctgatccaggacct
gtcagaaacaaaccaccatgtgaagctcccacaacagagggggcagagcaggagcgtggt
acagcagcggtcactcaggtgtcatccccggtagtggcccaggctaagcggggtgaccgc
tggtcttgggacccaaatgaggagcgaaagcgtcaggaaaggtggcagcaagagcaggag
cgcatgcttcaggagaagtaccagcatgagcagnagaagctgaaacaggagtgggagaga
gcgcaaagagaggtggaagacgaggagaggagataccatgaggaggagcgaaggatacta
gaggagactgtggcccctctgacccccctctcctccaccctgccctcgcccatccggggg
gatacccccgcgcctatggacccccaggacaccatcgtccggtcgctggccgactgggaa
cgcaagcaggagctgctggagagacagggggggaacactgagagagtggtatggaaagga
caagataacgacaggagtagtgacatcagcacagcgtccagagatgagagtctgaaaaca
gcagtcagctcaatcagccagaacagcagtcaggcagacaagctgacacagagtttgcag
aatggtcagaatgcaccacccaccatggccgttccccagccccccaacaagaaacaaaat
acagaggtcttactagactgcaccaaacccagacagcaggcgccctctcgggacaggagg
tgtggctccattgaatccatggggcccagtccatcaaactcacccaccacatgcccatct
gacatgcctcaatctccaaacaggtcggtgagcggtaagaagctgtgctccagttgcggt
caccctttgggaaaaggggcagccatgattattgagaccctcggcctttacttccacatc
cagtgctttaagtgtggggtctgtaagggacagctgggtgacacctccacagggacagac
gtgaggatccggaacggcctcctcaactgccaccagtgctacatccgctcccgctcagcc
ggccagccaaccacattgtga
DBGET
integrated database retrieval system
