Oncorhynchus gorbuscha (pink salmon): 123993537
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Entry
123993537 CDS
T07892
Name
(RefSeq) cullin-4B-like isoform X1
KO
K10609
cullin 4
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03420
Nucleotide excision repair
ogo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123993537
09124 Replication and repair
03420 Nucleotide excision repair
123993537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
123993537
03400 DNA repair and recombination proteins [BR:
ogo03400
]
123993537
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ogo04147
]
123993537
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
123993537
DNA repair and recombination proteins [BR:
ogo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
123993537
TCR (transcription coupled repair) factors
Cul4-CSA complex
123993537
Exosome [BR:
ogo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
123993537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
PG_binding_4
Motif
Other DBs
NCBI-GeneID:
123993537
NCBI-ProteinID:
XP_046151749
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Position
LG13:77100001..77122132
Genome browser
AA seq
868 aa
AA seq
DB search
MISRLAIAIRICIHFFMFPIGLPSPNPPPPTQEARPAASDVNNDSSITSSKKRKINSSER
EDIDSISSSPKTTNYSSSSCSSTSQHIQKKLRFEDSVDFIGLDVKMAEESSASCSSNKMK
TVFLAGGVGHHANGLTKTAGSTTFSNSKPGAAKKLVIKNFKEKPKLPENYTHETWQKLKE
AVEAIQNSISIKYNLEELYQAVENLCSHKISAKLYKQLQVVCEDHIKAQIDQFREDALDS
TLFLKKIDKCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSVWDMGLELFRFYIISDMKV
QSKTIDGILLLIERERSGETVDRSLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEGQ
RLMQEREVPDYLHHVNKRLEEEADRVITYLDQSTQKPLIATVEKQLLGEHLTATLQKGLN
HLLDENRIQDLCLLYQLFSRVRGGVLVLLQHWIEYIKAFGSTMVINPEKDKTMVQELLDF
KDKVDHIIHVCFMKNEKFVNAMKEAFETFINKRTNKPAELIAKHVDWKLRAGNKEATDEE
LEKMLDKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFT
SKLEGMFKDMELSKDIMVQFKQCQNLPGNIELTVNILTMGYWPTYVPMEVHLLPEMVRLQ
EIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFTLE
EIKIATGIEDGELRRTLQSLACGKARVIHKVPKSKDVEDGDKFSCNDDFKHKLFRIKINQ
IQMKETVEEQASTTERVYQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPAD
LKKRIESLIDRDYMERDKENPNQYNYVA
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgattagtagactggctatagctattagaatttgtattcattttttcatgtttccaata
ggtttaccttcccctaatcccccaccgccaacccaagaggctagaccagcagcttcagat
gtaaataacgacagcagtatcacgtcttcgaagaagaggaaaataaacagttctgagagg
gaagacattgattcaatctcttcatctcctaaaaccacaaattattcatcttcctcctgc
tcctccacttcgcaacacattcagaagaagttgaggttcgaagattcagtagatttcatt
ggactggatgtgaaaatggccgaggaatcgtctgcatcgtgttcttctaacaagatgaaa
acagtttttttggctgggggtgttgggcaccatgcaaacgggctgacgaaaacggcaggc
tccactaccttctccaacagcaaacctggcgctgcaaagaaactagtcatcaagaacttc
aaagaaaagcccaaattaccagagaactacacacacgagacctggcaaaagctaaaggag
gcggtcgaggccattcagaacagcatttcaatcaagtacaatcttgaggagctctaccag
gctgtggagaacctctgctcccataagatatcagccaagctctacaaacaactacaggtt
gtgtgtgaagaccacatcaaggcacaaatcgatcaattcagagaggatgcactggacagt
acactcttcctgaagaaaatagacaagtgttggcaagatcactgcagacaaatgatcatg
attagaagtatatttttgttcttggaccgcacctatgttttacaaaattcaatgctcccg
tcagtctgggacatgggcctggagttgtttaggttttacattatcagcgacatgaaggtc
cagagcaagaccatcgacggaatcctgctgctcatcgagagggagcgcagcggcgagacc
gtcgaccgtagcctgctgcggagcctattgagcatgctttctgacctgcagatttatcag
gactcctttgaacagcgctttttggaggagactaatcgtctgtatgccgctgaaggacag
aggctaatgcaggagagagaggtcccagattatcttcatcacgtcaacaaacgcttagag
gaggaagcagacagagtcatcacgtatctagaccagagcacacaaaaacctctcattgcc
actgtggaaaagcaactactgggtgaacatctcactgcaacactgcagaaaggcttgaat
cacctgctagatgagaacagaatccaggacttgtgtcttctctatcagctcttcagtcgg
gtgagagggggtgtgctagtcctcctacaacactggatcgagtacatcaaggcctttgga
agtacgatggtcattaaccctgagaaggacaagaccatggtacaggagctgctggacttc
aaggacaaggtggaccacatcatccacgtctgtttcatgaagaatgagaagtttgtcaat
gccatgaaggaagccttcgagaccttcatcaacaagaggacaaacaaacctgctgagctc
attgcaaaacacgtggattggaagctgagggcggggaacaaggaggccacggacgaggag
ctggagaagatgttggacaagatcatgatcatcttccgattcatttatggaaaagacgtt
tttgaggccttctacaagaaagatctggccaagaggttgctggtgggaaagagtgcctcc
gtggatgccgagaagtccatgctgtcgaaactgaaacatgaatgtggagcggcattcacc
agcaagctggaaggcatgttcaaggacatggagctttccaaggacatcatggtgcagttc
aaacagtgtcaaaacctccctggtaacattgagctgacggtgaacatcctcaccatggga
tactggcccacctacgtcccaatggaggtccatctgctcccagagatggtgcggctgcag
gagattttcaagacgttttacctcggcaagcacagtggcagaaagctacagtggcagtcg
acattaggccattgtgttttaaaagctgaatttaaagagggcaaaaaggagcttcaggta
tccctctttcagacactagtgctgctcatgttcaatgaaggagaggaattcaccttagag
gagatcaagatagctacaggaatagaggatggtgagctgcggcggaccctgcagtcgttg
gcgtgtggcaaggcgcgcgtcatccataaagtccccaaaagcaaagacgtggaggacgga
gacaagttctcgtgtaacgatgacttcaaacacaaactcttcaggatcaagatcaatcag
atccagatgaaagaaacggtggaggagcaagccagcaccacggaacgagtctaccaggac
cggcagtatcagatcgatgccgccatcgtcaggatcatgaagatgaggaagactctgagc
cataacctcttggtgtcggaagtgtacaaccaactcaagttccctgtcaagcctgctgac
ctaaagaagagaatagagtctctcattgacagagattacatggaacgcgacaaggagaac
cccaaccaatacaactatgtggcttaa
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