KEGG   Oncorhynchus gorbuscha (pink salmon): 123993537
Entry
123993537         CDS       T07892                                 
Name
(RefSeq) cullin-4B-like isoform X1
  KO
K10609  cullin 4
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03420  Nucleotide excision repair
ogo04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    123993537
  09124 Replication and repair
   03420 Nucleotide excision repair
    123993537
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ogo04121]
    123993537
   03400 DNA repair and recombination proteins [BR:ogo03400]
    123993537
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ogo04147]
    123993537
Ubiquitin system [BR:ogo04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     123993537
DNA repair and recombination proteins [BR:ogo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      123993537
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      123993537
Exosome [BR:ogo04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   123993537
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW PG_binding_4
Other DBs
NCBI-GeneID: 123993537
NCBI-ProteinID: XP_046151749
LinkDB
Position
LG13:77100001..77122132
AA seq 868 aa
MISRLAIAIRICIHFFMFPIGLPSPNPPPPTQEARPAASDVNNDSSITSSKKRKINSSER
EDIDSISSSPKTTNYSSSSCSSTSQHIQKKLRFEDSVDFIGLDVKMAEESSASCSSNKMK
TVFLAGGVGHHANGLTKTAGSTTFSNSKPGAAKKLVIKNFKEKPKLPENYTHETWQKLKE
AVEAIQNSISIKYNLEELYQAVENLCSHKISAKLYKQLQVVCEDHIKAQIDQFREDALDS
TLFLKKIDKCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSVWDMGLELFRFYIISDMKV
QSKTIDGILLLIERERSGETVDRSLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEGQ
RLMQEREVPDYLHHVNKRLEEEADRVITYLDQSTQKPLIATVEKQLLGEHLTATLQKGLN
HLLDENRIQDLCLLYQLFSRVRGGVLVLLQHWIEYIKAFGSTMVINPEKDKTMVQELLDF
KDKVDHIIHVCFMKNEKFVNAMKEAFETFINKRTNKPAELIAKHVDWKLRAGNKEATDEE
LEKMLDKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFT
SKLEGMFKDMELSKDIMVQFKQCQNLPGNIELTVNILTMGYWPTYVPMEVHLLPEMVRLQ
EIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFTLE
EIKIATGIEDGELRRTLQSLACGKARVIHKVPKSKDVEDGDKFSCNDDFKHKLFRIKINQ
IQMKETVEEQASTTERVYQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPAD
LKKRIESLIDRDYMERDKENPNQYNYVA
NT seq 2607 nt   +upstreamnt  +downstreamnt
atgattagtagactggctatagctattagaatttgtattcattttttcatgtttccaata
ggtttaccttcccctaatcccccaccgccaacccaagaggctagaccagcagcttcagat
gtaaataacgacagcagtatcacgtcttcgaagaagaggaaaataaacagttctgagagg
gaagacattgattcaatctcttcatctcctaaaaccacaaattattcatcttcctcctgc
tcctccacttcgcaacacattcagaagaagttgaggttcgaagattcagtagatttcatt
ggactggatgtgaaaatggccgaggaatcgtctgcatcgtgttcttctaacaagatgaaa
acagtttttttggctgggggtgttgggcaccatgcaaacgggctgacgaaaacggcaggc
tccactaccttctccaacagcaaacctggcgctgcaaagaaactagtcatcaagaacttc
aaagaaaagcccaaattaccagagaactacacacacgagacctggcaaaagctaaaggag
gcggtcgaggccattcagaacagcatttcaatcaagtacaatcttgaggagctctaccag
gctgtggagaacctctgctcccataagatatcagccaagctctacaaacaactacaggtt
gtgtgtgaagaccacatcaaggcacaaatcgatcaattcagagaggatgcactggacagt
acactcttcctgaagaaaatagacaagtgttggcaagatcactgcagacaaatgatcatg
attagaagtatatttttgttcttggaccgcacctatgttttacaaaattcaatgctcccg
tcagtctgggacatgggcctggagttgtttaggttttacattatcagcgacatgaaggtc
cagagcaagaccatcgacggaatcctgctgctcatcgagagggagcgcagcggcgagacc
gtcgaccgtagcctgctgcggagcctattgagcatgctttctgacctgcagatttatcag
gactcctttgaacagcgctttttggaggagactaatcgtctgtatgccgctgaaggacag
aggctaatgcaggagagagaggtcccagattatcttcatcacgtcaacaaacgcttagag
gaggaagcagacagagtcatcacgtatctagaccagagcacacaaaaacctctcattgcc
actgtggaaaagcaactactgggtgaacatctcactgcaacactgcagaaaggcttgaat
cacctgctagatgagaacagaatccaggacttgtgtcttctctatcagctcttcagtcgg
gtgagagggggtgtgctagtcctcctacaacactggatcgagtacatcaaggcctttgga
agtacgatggtcattaaccctgagaaggacaagaccatggtacaggagctgctggacttc
aaggacaaggtggaccacatcatccacgtctgtttcatgaagaatgagaagtttgtcaat
gccatgaaggaagccttcgagaccttcatcaacaagaggacaaacaaacctgctgagctc
attgcaaaacacgtggattggaagctgagggcggggaacaaggaggccacggacgaggag
ctggagaagatgttggacaagatcatgatcatcttccgattcatttatggaaaagacgtt
tttgaggccttctacaagaaagatctggccaagaggttgctggtgggaaagagtgcctcc
gtggatgccgagaagtccatgctgtcgaaactgaaacatgaatgtggagcggcattcacc
agcaagctggaaggcatgttcaaggacatggagctttccaaggacatcatggtgcagttc
aaacagtgtcaaaacctccctggtaacattgagctgacggtgaacatcctcaccatggga
tactggcccacctacgtcccaatggaggtccatctgctcccagagatggtgcggctgcag
gagattttcaagacgttttacctcggcaagcacagtggcagaaagctacagtggcagtcg
acattaggccattgtgttttaaaagctgaatttaaagagggcaaaaaggagcttcaggta
tccctctttcagacactagtgctgctcatgttcaatgaaggagaggaattcaccttagag
gagatcaagatagctacaggaatagaggatggtgagctgcggcggaccctgcagtcgttg
gcgtgtggcaaggcgcgcgtcatccataaagtccccaaaagcaaagacgtggaggacgga
gacaagttctcgtgtaacgatgacttcaaacacaaactcttcaggatcaagatcaatcag
atccagatgaaagaaacggtggaggagcaagccagcaccacggaacgagtctaccaggac
cggcagtatcagatcgatgccgccatcgtcaggatcatgaagatgaggaagactctgagc
cataacctcttggtgtcggaagtgtacaaccaactcaagttccctgtcaagcctgctgac
ctaaagaagagaatagagtctctcattgacagagattacatggaacgcgacaaggagaac
cccaaccaatacaactatgtggcttaa

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