Oncorhynchus gorbuscha (pink salmon): 123993566
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Entry
123993566 CDS
T07892
Name
(RefSeq) cohesin subunit SA-2 isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
123993566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogo03036
]
123993566
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
123993566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
PDS5
Cnd3
Cnd1
PI3K_P85_iSH2
RNA_pol_3_Rpc31
DUF4764
Motif
Other DBs
NCBI-GeneID:
123993566
NCBI-ProteinID:
XP_046151826
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Position
LG13:complement(78607814..78650228)
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AA seq
1298 aa
AA seq
DB search
MEVQHSDESSHDSLEEIEDISDSGSDFEVQLKAMKRRKQTTALLGPRPPKRPRRKAASQA
SPNPSTTSTQQARSPQPPQPSLGRTRQLGSPRRERERRGNHGMSAGDMYEAVRSGKSAMV
AVVDEWLDSYKQDRDAGLLELINFVVQCCGCKGVVSREMFDGMQNAEIISTLTKEFNEDS
VNYPLCSPGPQWRKFRASVCEFVQVLVRSCQNSFLYDEYLFSALLALLTGLSDSQVRAFR
HTSTLIAMKLMTGIVEVAVMVFAQIKTTQRRYDAERSKSAEHRASERLEELQATISELRE
HQEELSSMMNATFRGVFVHRYRDRVAEIRAVCIEEMGVWLRENPGDFLNDGYLKYLGWTL
HDKQGSVRLQCVRALQGLYKEKDLIGRLELFTSRFKERMLCMVLDKDPDVAVEAVQLLLL
LQQRTEEGLSEEECSHVYPLVFASRRGLASAAGAFLYHKLCSAMSSEPQEADMGSRQADM
GSRRAAFFNLLVSFYIQSEFHEHGAYLVDSLWGVAGAELRDWDTMTSLLVQEADQGRGLV
DEEEGALIELMMCAVRQAAEGHPPVGRAQAKKILSMKDKKTQAQDKRRITTHFITLLPQL
LAKYSADVEKVTCLLKAPLHFDLETYSSTGRLEKYLDLLLAQVCGIVEKHTESGVLEACA
RVACALSQDKYTFSGRADLVVSQLLDSLTDRFSSHLNELLQGTADEDEVYSAATALTRIA
AFSSAKDLTSWKLFEPCFQLLKSGVESRDIDKELMVPALKCAAFHVLWEKVRVANSTPTK
AEVKRLKKEVRSFCIICQSCLSVGQPEIRDQAFELLCDMLLLFGVSSVRSQPTLQPLAHP
PSDSLRFDMAAFLLDYVFTEPDDDQLSGEAEGVEEVKMATLQRRRNQLAGYCKLVIYGIL
NLSTATDVFKYYSKFYKDYGDIIKETLSKTKMISPVQSAKTVCLSLQQLFSALAPECVGG
GQEFGEIRELAKRLAMSFGIDLHRIRKPLVSLHMDGIRFALREATEVEQPPNLPFLEILS
EFSFKLLRQDRAQLSAFLSAECGSAAPSWPSLRMYQRSLQSGSSKPREDGERSATLSPHS
TPAAKRRRTTPQGSVSSASRGPWLDSSSIHSNVATPGLTSTVQRQPSKHLPVTHNTQAST
PGSDKGSIISEPESDDDFSEGGIHNNLATPGLTSTVQRQPSKHLPVTHNTQASTTGSDKG
SIISEPESVDDFSEGSLQRKVEPRRRSKLPVAQASPSGHCDLESHLTMLSLIEEDEDDEV
EEEEPEIEDFESDDSDHDTDFTLPSTRRSTSYLEELFQ
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgcaacactctgatgaatcaagccatgacagtcttgaggagatcgaggacatc
tcagactctggcagtgactttgaagtccagctgaaggccatgaagcggagaaaacagacc
actgcactactaggacctcggccacccaagagacctaggcgtaaagctgcatcccaggcc
agcccaaatcccagcaccacctccacccaacaagcccgttcccctcagccaccgcagcct
tccctggggagaactaggcagctcggctcccccaggcgagagagagagaggagagggaac
cacggcatgagcgctggggatatgtatgaggctgtgaggtctggaaagagtgctatggtg
gcggtggtggatgagtggctagacagctacaagcaggaccgggatgcgggcctactagag
ctcatcaacttcgtcgttcagtgctgtggctgcaaaggtgtggtgagcagagagatgttt
gacggtatgcagaacgctgagatcatcagcacactgaccaaagagttcaatgaggactct
gtgaactaccccctgtgctcccctggcccacagtggcgtaagttccgggctagcgtgtgt
gagtttgtgcaggtgctggtgcgctcctgccagaacagctttctgtacgacgagtacctc
ttctccgccctgctggcactgctcaccggcctgtctgactcccaggtcagggccttcaga
cacaccagcaccctcatcgcgatgaagcttatgactggtatagtggaggtagcagtgatg
gtgtttgcccagattaagaccacccagagacggtatgatgcggagaggagcaagagtgcc
gaacacagagcctcagagaggctggaggaactacaggccaccatcagcgagctgcgggag
caccaggaggagctgtcctccatgatgaatgctacgtttcggggtgtgtttgtgcaccgc
taccgagaccgcgtagctgagatcagggccgtatgtatcgaggagatgggcgtgtggctc
cgagagaaccccggagacttcctcaacgacggatatctcaagtacctgggctggaccctg
cacgacaagcaaggctcagtgcgtctgcagtgtgtgcgggccctgcagggcctctacaag
gagaaggacttaattggacgcctagagcttttcaccagcaggtttaaggagaggatgctc
tgcatggtgctagacaaggacccagacgttgcggtggaagctgtccagctgctgctgctc
ctccaacaaaggacagaggaaggcttgtccgaggaggagtgtagccatgtgtatcctttg
gtgtttgcctcccgcagaggcctggcatctgctgctggtgccttcctctaccacaaactg
tgtagtgcgatgagcagcgagccacaggaggcagacatgggcagtcgccaggcagacatg
ggcagtcgccgggccgccttcttcaacctgctggtctccttttacatccagagtgagttc
catgagcacggggcctacctggtggacagtctatggggtgtagcaggcgctgagctgagg
gactgggacaccatgacatcactgctggtacaggaggctgaccagggacgaggtctggtg
gatgaggaggagggggcgttgatagagttgatgatgtgtgctgtcagacaggcagctgaa
ggacacccgcctgtaggaagagctcaggcaaagaagatcctgagcatgaaggataagaag
acccaagcccaggacaagagacgcatcaccacccattttatcaccctcctgccccagcta
ctggccaagtactcggcggacgtggagaaagtgacttgccttctgaaggctccgcttcat
tttgacctggagacctacagcagcactggtagactggagaagtatctggatctgctgctg
gcccaggtgtgtggcatcgtggagaaacacacggagtcgggtgttttggaggcttgtgct
cgtgtggcgtgtgccctcagccaggacaagtacaccttctccggccgtgccgacctggtc
gtcagccagctactggacagtctgaccgaccgcttcagctcccacctcaacgagctgctg
cagggcactgctgatgaagatgaggtgtacagtgctgctactgccttgacgagaattgca
gccttcagcagtgccaaggacctgacttcatggaagctgtttgaaccctgctttcagctg
ctgaagagtggagtggagtccagagatattgacaaagagctgatggttcctgctctgaag
tgtgcagcgttccacgtgctctgggagaaagtcagggtggccaactctacaccaaccaag
gcagaggtaaagcgtctgaagaaggaggtgcgttcgttctgcatcatctgtcagagctgc
ctgtctgtgggccagccagagatcagggaccaggcatttgagctgctgtgtgacatgctg
ctgttgtttggggtgagctcagtgaggtctcagcccaccttgcagcccctggcccacccc
ccctccgactccctccgcttcgacatggctgccttcctccttgactatgtcttcactgag
cctgacgacgaccaactgtccggtgaggcagagggagttgaggaggtgaagatggctact
ctccagcggcgacgcaaccagctggccggctactgtaaactggttatctacggcatcctg
aatctcagcactgccactgatgtcttcaaatactacagcaagttctacaaagactacggt
gacatcatcaaggagactctgagcaaaaccaagatgatcagtccagtgcagagcgccaag
actgtctgcctgagtctgcagcagttgttctcagcactggctccagagtgcgttggtgga
ggccaggagtttggggagatcagagagctagctaaaaggctggccatgagcttcggcata
gacctgcaccgcatccgcaaaccattggtgtccctgcacatggatggtatccggtttgcg
ttacgggaggcaacagaggtggagcaaccccccaatctgcccttccttgagatactcagc
gagttcagtttcaaactcctacgtcaggaccgagcccagctgtctgctttcctgagtgct
gagtgtggctctgctgccccctcttggccatctctgaggatgtaccagcgctctctgcag
tctggctcctccaagccccgagaggatggggagaggagtgcaacgctgtccccccacagc
acccctgcagccaaacgcaggaggactaccccccaggggtcagtgtccagcgctagcaga
gggccatggctcgacagcagcagtatccatagcaacgtggccaccccaggtctcacctcc
accgtgcagagacagccgtccaagcacctgcccgtcacacataatacacaggcctccacc
ccaggctccgacaagggtagcatcatctccgaaccagagtctgatgacgacttttcagag
ggcggcatccacaacaacctggccactccaggcctcacctccaccgtgcagagacagccg
tccaagcacctgcccgtcacacataatacacaggcctccaccacaggctccgacaagggt
agcatcatctccgaacccgagtctgttgacgacttttcagagggttcactgcagcgcaag
gtggaacccaggcgaaggagcaagctgcctgttgcacaagccagcccctctgggcactgt
gacctcgaatcacatctcaccatgctgagtctgattgaggaagatgaggatgatgaagtg
gaggaagaagagcctgagattgaggacttcgagagtgacgattctgaccacgacactgac
tttacactgccgtccacccgtcgctccaccagttacttagaggagttgtttcagtga
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integrated database retrieval system