Oncorhynchus gorbuscha (pink salmon): 123993601
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Entry
123993601 CDS
T07892
Name
(RefSeq) syntaxin-5-like
KO
K08490
syntaxin 5
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
123993601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
123993601
Membrane trafficking [BR:
ogo04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
123993601
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
Apolipoprotein
HrpB7
DUF16
MCPsignal
Motif
Other DBs
NCBI-GeneID:
123993601
NCBI-ProteinID:
XP_046151895
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All DBs
Position
LG13:complement(83472914..83481726)
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AA seq
300 aa
AA seq
DB search
MTCRDRTNEFQSACKSLQSRQNGVQHTKPALSALKQRSDFTLMAKRIGKDLSNTFAKLEK
LTILAKRRSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDLIRSRGAPSGRHIQTHSNT
IVISLQSKLASMSNDFKSVLEVRTENLKQQKNRREQFSQRHVSSPLHANNFKSSVLMQDE
SRSMGAEVAINMDNQSNPLQLQLIDEQDSYIQSRADTMQNIESTIVELGSIFQQLAHMVK
EQEETVQRIDANVEDTQLNVDMAHTEILKYFQSVSSNRWLMVKIFLVLIVFFIVFVVFLA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgacgtgcagggatcgaaccaacgagttccagtccgcctgcaaatccctacagagccga
cagaatggtgttcagcacaccaagccagccctcagtgctctcaagcaacgcagtgacttc
accctcatggccaagagaatagggaaggacttgagtaatacatttgctaaactagagaaa
ctcactatattggctaaaagaagatctctatttgatgacaaggcagtggagattgaagag
ttaacctacatcatcaagcaggacattaacagcctgaacaagcagattgcccagctgcag
gatctgattcgttcacgcggagcgcccagcggcagacacatccagacccattccaacacc
atcgtcatctccctgcagtccaaactggcgtctatgtccaatgacttcaagtcagttcta
gaagtaagaacggagaacctgaagcagcagaagaacaggagagaacagttctctcagcgt
cacgtctcttctcctctccacgccaacaacttcaagagttcagtgttgatgcaggatgag
tccaggagtatgggggctgaggtggccatcaacatggacaaccagtctaaccctctacag
ctccagctcattgatgagcaggactcatacatccagagccgtgcagacaccatgcagaac
attgagagcaccatcgtagagctgggctctatctttcagcagctggctcacatggtgaag
gagcaggaggagacagtacagaggattgatgctaacgtggaggacactcagctcaacgtg
gacatggctcacacggagatcctcaagtacttccagtctgtgtcctccaaccgctggctc
atggtcaagatcttcctcgtcctcatcgtgttcttcatcgtctttgtggtcttcctcgcc
tga
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