Oncorhynchus gorbuscha (pink salmon): 123993634
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Entry
123993634 CDS
T07892
Name
(RefSeq) cytoplasmic FMR1-interacting protein 2
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04810
Regulation of actin cytoskeleton
ogo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
123993634
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
123993634
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
123993634
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
123993634
Factors involved in mRNA localization
Other mRNA localization factors
123993634
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
zf-CW
Spore_SspJ
Motif
Other DBs
NCBI-GeneID:
123993634
NCBI-ProteinID:
XP_046151950
LinkDB
All DBs
Position
LG13:84720972..84764848
Genome browser
AA seq
1252 aa
AA seq
DB search
MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGHEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMKFMYFQRKAIERFCGEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLQQQLEVIPGYEELLAD
IVNISVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLGKIDKFFK
LQVVPLFGDMQIELSRYIETSAHYEENKSKWTCTQSSISPQYNLCEQMVQIRDDHIRFIS
ELARYSNSEVVTGSGLDSQKSDEEYRELFDLALRGLQLLSKWSTHVMEVYSWKLVHPTDK
FCNKDCPGTAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNQAIRNTIYA
ALQDFAQMTLREPLRQAVRKKKNVLISVLQAIRKTICDWEGAREPPNDPCLRGEKDPKGG
FDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPIVLAIEDFHKHSFFF
THLLNFSEALQHCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEPSMME
YVLYPLDLYNDSGYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMSGSVL
LDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYKSLDQ
AISRFESEDLTSIVELEWLMDINRLTHRLLSKHMTLDSFDAMFREANHNVSAPYGRITLH
VFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQRDKPANVQPYYLYGSKPLNIAYSHIY
SSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVKSLLQGTILQYVKTLIEVMPKICRL
PRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQSLREVGNAILFCLLIEQALSQEEVCDL
LHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAPLHLVPLIERLGTPQQIAIAREGDLLT
KERLCCGLSMFEVILTRIRSFLQDAVWRGPPPTNGVMHVDECMEFHRLWSAMQFVYCIPV
GTHEFTAEQCFGDGLNWAGCSIIVLLGQQRRFDLFDFCYHLLKVQRQDGKDEIIKNVPLK
KMADRIRKYQILNNEIFAILNKYMKAVETDSSTVEHVRCFQPPIHQSLATTC
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgacgacccacgtgaccctggaggatgctctgtctaatgtggatctgttggaggagctg
cccctccctgaccagcagccctgcatcgaacctccaccttcatccatcatgtaccaggct
aacttcgacacaaactttgaggacaggaatgcgtttgtgacggggatagctcgctatatc
gagcaggctactgtccactctagcatgaatgagatgctggaggagggccatgagtacgct
gtcatgctctacacctggagaagctgctcaagagctataccacaggtgaagtgtaacgag
cagcccaacagggtggagatctatgagaagactgtggaggtgctggaaccagaggtcacc
aagctcatgaagttcatgtacttccagcgtaaggccatcgagcgtttctgcggggaggtg
aagcgtctctgccacgctgagcggaggaaagactttgtctctgaagcctacctcctcacc
ctgggcaagttcatcaacatgttcgctgtgctcgacgaactcaagaacatgaagtgcagt
gtcaagaacgaccactctgcctataaaagggcggctcagttcctgaggaagatggctgac
cctcagtccatccaggagtcacagaacctctccatgttcctagccaatcacaacaggatc
actcagtgtctgcagcagcagttggaggtgattcctggctatgaggagttgttagcagac
attgtcaacatcagtgttgattactatgagaacaagatgtacctgacgcccagcgagaaa
cacatgctgctcaaggtgatgggttttggtctctatctgatggacggtaacgtcagtaac
atctacaaactagacgccaagaagaggatcaacctgggaaagatcgacaaattcttcaag
ctgcaggtggtgcctctgtttggagacatgcagatagaactatcacgttacatagagacc
agcgcccactacgaggagaacaagtccaagtggacgtgtacccagagctccatttctccc
cagtacaacctgtgtgagcagatggttcagattcgtgatgaccacatccggttcatctct
gagctggctcgctacagtaacagtgaggtagtgaccgggtcaggcctggacagtcagaaa
tcagatgaggagtacagggaactgtttgacctggcactcagagggttacagctgctgtcc
aagtggagcacacacgtcatggaagtgtattcgtggaagttggtccacccgacagataag
ttctgtaacaaggactgtcctggcacagcagaggagtatgagagagctacacgttacaac
tacacctctgaggagaagtttgccctggtcgaggtcatcgccatgatcaagggactgcag
gtgttgatgggtcgtatggagagcgtattcaaccaggccataaggaacaccatctatgca
gccctacaggactttgcccagatgaccctcagagagcctctacgtcaggccgtacgcaag
aagaagaacgttctcatcagtgtcctgcaggcaatccgtaagaccatctgtgactgggag
ggggctcgggagcctcccaatgacccctgtctcaggggggagaaggaccccaagggaggg
ttcgacatcaaggtgccccgcagagctgtgggaccctcgagcacacagctgtacatggtt
cgtacgatgctggagtcgttgatagctgataagagtggttctaagaagactctacgcagc
agtctggatggacccatagtactggctatagaagacttccacaaacactccttcttcttc
acacacctgctcaacttcagcgaggcgctgcagcactgctgtgacctgtctcagctgtgg
ttcagagagttcttcctggagttgaccatgggtcgcaggatccagttccccatcgagatg
tccatgccctggattctcacagatcacattctggagaccaaggagccatccatgatggag
tatgtgttgtaccctctggacctctacaatgacagtggctactacgctctgaccaagttc
aagaaacagttcctctacgatgagatagaggctgaggtgaacctgtgcttcgatcagttt
gtctacaagctggctgaccagatatttgcctactacaaagccatgtctggaagtgtcctc
ctggacaagcgtttcagggcagagtgtaaaaactatggtgtgatcatcccctatcccccc
tccaaccgttatgagacgctgctcaaacagagacacgtacagctcctgggtcgctccatc
gatctgaaccgtctgatcacccagaggatctcagcagccatgtacaagtctctggaccag
gccatcagtcgatttgagagtgaagacctcacctctattgtggagttggagtggctgatg
gacatcaacagactgactcatcgtctgctctcgaagcacatgaccctggacagcttcgac
gccatgttccgcgaggccaaccacaatgtgtctgccccctacggacgcatcacgctccat
gtcttctgggaactcaactttgacttcctccccaactactgctacaacggctccaccaac
cgcttcgtgcggactgccatcccctttacccaggagcctcagcgagacaagccggcgaac
gtgcagccgtactacctgtatgggtctaagcctctgaacattgcctactcccacatctat
agctcctacaggaacttcgtaggcccgccccacttcaaaaccatctgccgtctccttggt
taccagggcatcgccgtggtgatggaggaactgctcaagatagtcaagagcctgttgcag
ggtactatcctgcagtatgtgaagactctgatcgaggtaatgcccaagatctgtcgcctg
ccgcgccacgagtacggatccccaggtatcctggagttcttccaccaccagctgaaggac
attatagagtacgcagagctgaagacggatgtcttccagagtctcagagaggtggggaac
gccatcctcttctgtctgctcatcgaacaagctctgtcccaggaggaggtgtgtgacctg
cttcatgcagctcccttccagaacatcctccccagggtctacatcaaagagggggagcgt
ctggaagtcaggatgaagaggctggaggctaagtatgctccactccatctggtgcccctc
atcgagaggctggggacccctcagcaaatagctatagcccgtgagggagatctgttgacc
aaggagcgtctttgctgtggcctgtccatgttcgaggtgatccttacgaggatccgtagt
ttcctgcaggacgccgtgtggcgaggcccgccccccaccaatggagtgatgcacgtggac
gagtgtatggagttccaccgcctctggagcgccatgcagtttgtttactgcatccccgtc
ggcactcacgagttcaccgcagagcagtgttttggtgacgggctgaactgggcaggctgc
tccatcatcgtgctgttgggtcagcagcgccgcttcgacctgtttgacttctgctaccac
ctgctcaaggtgcagaggcaggacggcaaggatgagatcatcaagaacgtgccgctgaag
aagatggctgatcggatcaggaagtaccagatcctgaacaatgagatctttgccatcctt
aacaagtacatgaaggctgtggagaccgatagttccaccgtggagcatgtccgctgcttc
cagccacctatacaccagtccctggccacaacgtgctga
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