Oncorhynchus gorbuscha (pink salmon): 123993656
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Entry
123993656 CDS
T07892
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 4-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo00061
Fatty acid biosynthesis
ogo00071
Fatty acid degradation
ogo01100
Metabolic pathways
ogo01212
Fatty acid metabolism
ogo03320
PPAR signaling pathway
ogo04146
Peroxisome
ogo04216
Ferroptosis
ogo04920
Adipocytokine signaling pathway
Module
ogo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
123993656
00071 Fatty acid degradation
123993656
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
123993656
09143 Cell growth and death
04216 Ferroptosis
123993656
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
123993656
03320 PPAR signaling pathway
123993656
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ogo01004
]
123993656
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ogo04147
]
123993656
Enzymes [BR:
ogo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
123993656
Lipid biosynthesis proteins [BR:
ogo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
123993656
Exosome [BR:
ogo04147
]
Exosomal proteins
Exosomal proteins of breast milk
123993656
Exosomal proteins of breast cancer cells
123993656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
123993656
NCBI-ProteinID:
XP_046151973
LinkDB
All DBs
Position
LG13:88269069..88287262
Genome browser
AA seq
711 aa
AA seq
DB search
MSLHQSELHSLLLLPLHLVVWLYSLLSFLPWYYFTGAGEKRTRATRVKALSTSGRSEGPY
RCVDCFQSLATEDFPGKDTLDKLFQQAVQRFGDSDCLGTREVLSEENEPQPSGKVFKKLI
LGEYCWLSYQQVDSVVSYMGSGLAALGQQSKSMVAIFCETRAEWMISAQACFRYNFPLVT
FYATLGEEAVAFGLNETGVTHLITSTELLETKLKGVLSQIPKLKHIISVDQRRVSTEGYP
PGLAIHSMASVQELGSQPDNLARPVVSPQASDLAVVMYTSGSTGRPKGVMVVHSNLTAGM
TGQCERIPGLGPKDTYIAYLPLAHVLEMTAEISCMAYGCPIGYSSPQTLSDQSTKIKRGS
RGDSSVLKPTLMAAVPEILDRINKNVMRKVGEMSYIQRTLFNLGYNYKLEQVKRGYDAPL
CNVLLFSKVRRLLGGRVRLMLSGGAPLSSATQRFMNICFCCPVGQGYGLTETCGAGTITE
VADNSTGRVGAPVICCEIRLRDWLEGGYTNQDKPHPRGEILIGGPNITMGYYRNESNCQD
YFVDEKGQRWFCTGDIGEIHPDGCLQIVDRKKDLVKLQAGEYVSLGKVEAALKNCSLIDN
ICAYANSEQNYVISVVVPNQKMLTELARQRGVQGSWEEVCTHPAMEEVVLKEIKEVATSI
KLQRFEIPVKVHLSPEPWTPETGLVTDAFKLKRKELKNHYLQHIERMYGRP
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgagtctccaccaatcagagctccactccttgctcctcctccccctccacctcgtggtg
tggctgtactcccttctttccttcctgccctggtactacttcaccggggctggggagaag
agaacccgggccacgcgggtcaaggctctctccacctccgggcgctccgaggggccgtac
cgctgtgtagactgcttccagagcctggccacagaagacttccctgggaaagacacgctg
gacaaactgttccagcaagccgtacagcgctttggggactctgactgtctagggacaaga
gaggtactgagtgaggagaatgagccccagcccagcggaaaggtctttaagaagctgatt
ctgggggagtactgctggctgtcctaccagcaggtagactctgtagttagttacatgggc
agcgggttggcagcactgggccagcagtctaagagtatggttgccatcttctgtgagacg
agagctgagtggatgatctctgctcaggcctgcttcagatacaacttcccattggtgacg
ttctatgcgacactgggagaggaggcggtggcgtttggactgaacgagacaggagtcaca
cacctcatcaccagcacagaactactggagaccaaactgaagggtgttctctctcagatc
cccaagctgaaacacatcatctctgtagaccagaggagggtcagtacagagggataccca
cctggtctcgccatccacagcatggcatcagtacaggagctggggtcacagccagacaac
ttggctaggccggtggtgagtcctcaggcatcagacctggctgtagtgatgtacaccagt
ggttctacaggcagacccaaaggagtcatggtcgtccacagcaacctcaccgctggaatg
accggacagtgtgaacgtatccctggcctggggcctaaagacacctacatagcatacctg
cctctggcccatgttttggaaatgacagcagaaatctcttgcatggcgtatggctgtccc
atcggttactcctcccctcagacactctctgaccagtccactaagataaagagaggaagt
agaggagacagctctgtgctgaaaccaactctaatggctgctgtaccggaaatcctggat
cgcatcaataagaatgtgatgaggaaggttggggagatgagttacattcagaggacgctg
ttcaacctgggatacaactacaaactggagcaggtcaagaggggttacgatgctcctctc
tgcaatgtgctgctgttcagtaaggtgcgcaggttgctgggcggcagggtgaggctgatg
ttgtctggaggggctccgctttcctccgcaacacagaggtttatgaacatatgtttctgc
tgtcctgtgggccaggggtacggactgacggaaacctgtggagctggtaccatcaccgag
gtggcagacaacagcacgggtagagttggcgctcctgtcatctgctgtgagatccgactc
agggactggctggagggaggctacaccaatcaggacaaacctcacccccgaggggagatt
ctgattggagggcctaacatcactatgggttactataggaacgagagtaactgccaggac
tactttgtggacgagaagggtcagaggtggttctgtacaggagacataggagagatccac
cctgacggatgtctgcagatagtggatcgtaagaaggacctagtgaagctccaggctggg
gaatatgtctctctggggaaagtagaagctgctctgaagaactgctccctcatcgacaac
atctgtgcttacgcgaacagtgagcagaactatgtgatcagtgttgtggtacccaaccag
aagatgttgactgagctggccagacagaggggagtgcaagggagctgggaggaggtgtgc
acccaccctgccatggaggaggtggtgctgaaggagatcaaagaggtggccacttcaatt
aaactccagaggtttgagatcccagtcaaggtccacctcagcccagagccctggacccct
gagacaggactggtgactgatgccttcaagctgaagagaaaagagttaaagaaccactat
ctccaacacatagagaggatgtatgggagaccataa
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