Oncorhynchus gorbuscha (pink salmon): 123993689
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Entry
123993689 CDS
T07892
Name
(RefSeq) protocadherin-20-like
KO
K16498
protocadherin delta 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
123993689
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ogo01009
]
123993689
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
123993689
Protein phosphatases and associated proteins [BR:
ogo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
123993689
Cell adhesion molecules [BR:
ogo04515
]
Cadherins
Protocadherins
123993689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
123993689
NCBI-ProteinID:
XP_046152045
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All DBs
Position
LG13:complement(90086919..90093566)
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AA seq
880 aa
AA seq
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MNWAVLLQNVLVMVHLRQILCYGSVRLSVPEEQEAGVRVGSIGSTFPPLYQLLTQFYLRV
DQGTGDVYTTDNRMDREALCPDQLQAEECIVPHDAIVGPEAELVKFMVVVEDINDHAPHF
DNTEIHLSVSEDVAVGASFLLDDQAEDRDMGRNGQLQYHLEGAGGFFSVTVEEEDEVAIF
FLVVRQGLDREKQDLHELTLVAADCGSTPLSATATLFIKVTDVNDNCPEFTLDSTQKVVI
TEDTPRDTVVARVRATDLDLGPNADITYSLSPKVSERARELFSLDSHTGLISLRGDLRDR
HSDSVSDRGEEVVLKVLASGPHCPPADTQVTVSLLPAPYQENGIKIRFIAEHQNQTIVLQ
ENQPPTVLALLELPGDTTSVRGSSYLSIEGEVPFSLSRQNGKYLLSTSKPLDYEVKSEYR
VSVVMRGDVEEPAAHGFPRREIQVRVVDVNDNAPQFLQSHYLIDIEENNPSGASLLKVRA
QDADSGQNGRVTYKLDRPSHTAAAITLYRIDQNTGQLTVSVPLDREQQDVHRLTIVARDN
GSPPLESSVMVTITVLDQNDNAPVFITPHFMFFIPENIPPLAQVGKVGVSDIDAGLNGDV
EVRVVNSSGSPFVIDNAQGTLRCMADVDREKQDRYELDLLATDNGRPSPLTSVARVTVFI
EDVNDNQPQVILPSSNLSCLTISTGTTTGTMVTKIYAIDKDSGLNSEITYTIAAREPPGT
STSSHHHSSSPFQLDARSGNVTLAQRLMGKDLGMHHLFIVVTDGGKPAPLHTTVWVNLLV
NDTLEPCHLDTMPRSLPYRLAQTPSETPSEMPVCDRHTQLILLLGLGMMVASLCLFLATV
VLYMKQRKRSRGEQQQRRGINEENQIPLRIPERYFLGEEL
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgaactgggctgtactccttcagaacgtgctggtcatggtccatctcaggcagatcctg
tgctacggttctgttcggctctcggttccagaggagcaggaggctggggtccgggtcggg
tccatcgggtccacgttcccccccctttaccagctcctgacccagttctacctcagggtg
gaccaggggacaggggatgtctacaccaccgacaacaggatggaccgagaggccctgtgt
cctgaccaactccaggctgaggagtgtatcgtcccacacgacgccatcgtgggccctgag
gcagagctggtgaagttcatggtagtagtagaggacatcaatgaccacgctcctcacttt
gacaacactgagatccatctgagtgtctctgaggatgtggctgtaggggccagtttctta
ttggacgaccaggcagaggacagagacatgggacgtaacggacagctgcagtaccaccta
gagggcgccggtgggtttttcagtgtgacagtagaagaagaagatgaagtggccattttc
tttttggttgtgcgacaaggactagaccgcgagaagcaggatcttcatgagttgactcta
gtggcagcagactgtggttctaccccactaagcgccacagcaacgttattcataaaagtg
actgacgtgaatgacaactgcccagagtttaccctggacagcacccagaaggtggttatt
acagaggacacacccagagacacagtagtagccagggtcagagccacagacctagacctg
ggccccaacgctgacattacctactccctcagccccaaggtctcagaacgggcaagggaa
ctcttcagtctggacagtcacactggcctgatcagcctgagaggagacctcagagaccgc
cacagtgacagtgttagtgacaggggagaggaggtggtgttgaaagtgttagccagcggc
ccccactgcccccctgcagacactcaggtaaccgtatccctgctccccgcgccataccag
gagaatggcataaagatcaggttcatagcagagcatcaaaaccagacgatagtgttgcag
gaaaaccagccccccactgtcttggctttgctagagctaccgggggatactactagtgtt
agaggctcatcgtatctctccattgaaggagaggtgccgttctctttgagccggcagaat
ggcaaatacctcctgtcgacatcaaagcctttagactacgaggtgaagagtgaatatcgt
gtttctgtagtgatgcgtggtgatgttgaagagcctgcagctcacggcttccccaggaga
gagatccaggtgagggtggtggatgtgaatgataatgctccacagtttctccagagtcac
tatctgatagacatagaggagaataacccctctggggcgtctctgctgaaagttagggcg
caggatgcagacagcggtcagaacgggcgggtcacttacaaactggatcgaccatcacac
acggcggcagcaataaccctttatagaatcgaccagaacacaggtcagctgacagtttct
gtacccctggacagagaacaacaggatgttcacagactgactattgtagccagagataac
ggctctcctccattagagtcctctgtgatggtgacgatcaccgtcctggaccagaatgat
aacgctcctgtcttcatcacccctcacttcatgttcttcatccctgagaatatacctccc
ctggcccaggtggggaaggtgggggtgtcagacatagacgcagggcttaatggggatgtg
gaggtgagggtggtgaacagcagtggcagccccttcgtcatagacaacgcccaggggacg
ctgcgctgcatggccgatgtcgaccgcgagaagcaggaccgctacgagttagatctgctc
gccaccgacaacggacgcccgtcacctctgacctccgtcgccagggtaacagtgttcatc
gaggatgtcaacgacaaccagccccaggtcatccttcccagcagcaacctgtcgtgtctc
accatctccactgggaccaccacgggcaccatggtaaccaagatctacgccatcgacaag
gactcagggttaaactcggagatcacatacaccattgcagcgcgggaaccaccgggcacc
tctacatcatcccatcaccacagcagcagtcccttccagctggacgctcggtctggtaat
gtgaccttagcccagagactcatgggtaaggacctggggatgcaccacctgttcatcgtg
gtgactgacggtgggaaaccagcgcccctccacaccaccgtctgggtcaatctgctggtc
aacgacaccttggaaccatgccatctggacaccatgcccagatccctgccctacagactg
gcacagacgccctccgaaaccccctccgagatgcccgtctgtgacagacacactcagttg
atcctgctgctaggcctgggcatgatggtggcctcgctctgtctgtttctggccacagtt
gttttatacatgaaacagaggaagagatctagaggggaacaacagcagaggagggggata
aatgaggagaatcagattcctctacgcattccggagagatatttcttaggagaagagtta
taa
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