Oncorhynchus gorbuscha (pink salmon): 123993711
Help
Entry
123993711 CDS
T07892
Name
(RefSeq) vesicular integral-membrane protein VIP36-like
KO
K10082
lectin, mannose-binding 2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123993711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
123993711
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
ogo04091
]
123993711
Membrane trafficking [BR:
ogo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
123993711
Lectins [BR:
ogo04091
]
L-type lectins
123993711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_leg-like
Lectin_L-type_dom
Lectin_legB
Motif
Other DBs
NCBI-GeneID:
123993711
NCBI-ProteinID:
XP_046152082
LinkDB
All DBs
Position
LG13:92299584..92311140
Genome browser
AA seq
362 aa
AA seq
DB search
MGVAVSYPDQEDGYPGSMVSFPGSKMRVVGTFISRPLPFLLLHFTLLKCDITDGNVEHLK
REHSLMKPYQGVGSSPSSQWDFWGSTLVTSSYVRLTPDERSKQGSIWNTVPVHLKDWEMH
VQYKIHGSGKKNLHGDGIAIWYTKERLHPGPVFGNQDHFVGLALFVDTFRNDLHGMDRSF
PYISAMVNNGSLPYDHGNDGRTSELGGCSSEIRNKDHDTYLAIRYSKRRLSVMIDIDDKN
EWKECIDIGGVRLPTGYYFGASAATGDLSDNHDVISMKMYQLMVEHAPDEDSLDWTKIEP
SVSLLKSPKDNIDDPTGNFRSTPLTGWKVFLLLLCALLGIVVCGVVGAVVFQKRQERNRR
FY
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgctgtgtcctacccggatcaggaagatggttatccaggatccatggtgtct
ttcccaggcagcaaaatgagagttgttggtacatttatcagcagaccactgcctttccta
ttacttcactttactctattgaaatgcgatataacagacggcaatgtagagcacttaaag
cgggagcattcgctcatgaaaccgtaccagggtgttggaagcagcccatccagtcagtgg
gacttctgggggagcacgctagtcaccagctcgtatgtgcgcctgacacctgatgagaga
agtaaacagggatcaatatggaacacagtgcctgttcatctgaaagactgggagatgcac
gtgcagtacaagatccacgggtcggggaagaaaaatctccatggagacggcatcgcaatc
tggtacacgaaggagagacttcatccaggcccagtctttggaaaccaagaccattttgtt
ggcctggctttatttgtggataccttccgcaatgatctccatgggatggatcgttccttt
ccctacatctctgccatggtgaataatggttctctgccctatgaccatgggaatgatgga
cgtacctctgaactgggaggctgctcttctgagatcaggaacaaagaccatgacacctac
ctcgccattcgctactccaagcgcagactctcagtgatgattgacattgatgataagaat
gaatggaaagagtgcattgacatcgggggtgtccgcctccccacggggtactactttggg
gcttctgctgctacgggagatctctctgataaccatgacgtcatctctatgaagatgtat
cagctgatggtggaacacgcacctgatgaggacagtctggactggaccaagattgagcca
agtgtcagcctgctgaagtcccccaaagacaacattgatgatcctactggtaacttccga
agcacacctcttactggctggaaggtcttcctgcttctgctatgtgctctactgggaatt
gtagtttgtggtgttgtaggggctgtagtctttcagaagcgccaggaaagaaacaggagg
ttttattga
DBGET
integrated database retrieval system
