Oncorhynchus gorbuscha (pink salmon): 123993741
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Entry
123993741 CDS
T07892
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04120
Ubiquitin mediated proteolysis
ogo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123993741
04120 Ubiquitin mediated proteolysis
123993741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
123993741
Enzymes [BR:
ogo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123993741
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123993741
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
FANCL_C
Motif
Other DBs
NCBI-GeneID:
123993741
NCBI-ProteinID:
XP_046152141
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All DBs
Position
LG13:93714342..93726351
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AA seq
624 aa
AA seq
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MVRAGLVTATSLALTGAVIAHAYFLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKIFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVGLFTLLLFIKCFHWLA
EDRVDFMERSPNISWVFHFRVFSLMVLLGILDFLFVNHACHSIITRGASVQLVFGFEYAI
LMTMVLTTFIKYTLHTVHLQSDNPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLLASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASNPNQPPTPAPAQPPAPAAPANAP
VPGNVGPGMMPHFPPGLFPFWGPFPGAAPPAGAPGAPGATDAPGATEAAQAQGAGTSHST
GASAAPAPGGPMPGFPFPSFPPPPFPSAPWLTMPPPPPFVSSMPPPPPALSTMSEAELRE
LEQEGRRGLEARLQCLHNIHTLLDAAMLNIHHYLTTVATLTPPQSETSSAAGEASGSSPP
STSAETRENQENDSQSSTAAEPEAVNGATGFSQPDSTTLGDSEDQRDEEEGDGEEVGEDG
EPNPSELRRRRLRKLETTPPPPDH
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgtgcaggcctggtgactgccaccagtctggctctgactggcgctgtgattgcc
catgcctactttctcaaacaccagttctaccccactgtggtctacctcactaagagtagc
cccagtatggcagtgttgtacatccaggcgtttgtgttggtgttcctgttgggaaagttc
atgcgtaaaatcttcttcggacagctgagagctgcggagatggagcatctgatagagcga
tcctggtatgctgtcacagagacgtgtctggcctttactgtgttcagggatgacttctct
ccccgcttcgtaggcctcttcaccctgctgctcttcatcaagtgcttccactggctggct
gaggacagggtggactttatggagagaagtcctaatatatcctgggtcttccacttcagg
gtgttctctctcatggtgttgctgggaatcctggacttcctgtttgttaaccatgcctgt
cacagtatcatcacccgaggggcctctgtccaactagtctttggatttgagtatgccatc
ctgatgacaatggtgctcaccaccttcatcaagtacaccctccacactgttcacctccag
agtgacaacccctgggacaacaaagcagtctacatgctctacaccgagctcttcactggt
ttcatcaaggtcctcctgtacatggcgttcatgaccatcatgataaaggtgcataccttc
cccctattcgccatccggcccatgtacctggctatgaggcagttcaagaaagcagtaaca
gatgccataatgtcacggcgagccatccgcaacatgaatacactttacccagatgccact
cctgaagatctgctggcttcagacaacgtgtgtatcatctgtcgtgaagagatggtgact
ggagccaagaaacttccctgcaatcatatcttccactctagttgccttcgctcctggttc
cagagacagcagacgtgtcctacatgtcgtatggatgtcctccgggcctctaaccccaat
cagccccccaccccagcgcctgcccagccccctgccccagcagcacccgccaacgcccct
gtccctgggaacgttggccctggaatgatgccccacttccccccagggctgtttcctttc
tgggggcccttccctggagcggctccccctgctggtgctcccggtgccccaggggccaca
gacgcccctggggccacagaggcggctcaggctcagggcgctggtaccagtcattccaca
ggggccagtgctgctcctgctccaggaggccctatgcctgggttccccttcccctccttc
ccacccccaccgttcccctcagctccgtggctgactatgccaccacctccaccatttgtg
tcatccatgccccctcctcccccggccctgtccaccatgtcagaggctgagctgagggag
ctggagcaggagggccgtagaggcctggaggccagactgcagtgtctccacaacatccac
actctactggacgctgccatgctcaacatccaccactacctcactaccgtcgccacgctc
actcctcctcagtcagaaaccagcagcgctgctggcgaggccagcggatcatctcctccc
tccactagtgcagaaacccgggagaaccaggagaatgactctcagagcagtacagccgct
gaacctgaagctgtgaatggggccacaggtttctcccagccagactctaccacgttgggc
gacagtgaagaccagcgggatgaagaggaaggagatggagaggaagtcggcgaagacgga
gagcccaacccttcagagctgaggcgccgtcgtctccgcaaactcgagaccacaccccct
cctcctgaccactga
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