Oncorhynchus gorbuscha (pink salmon): 123993760
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Entry
123993760 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: catenin alpha-1-like
KO
K05691
catenin alpha
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04520
Adherens junction
ogo05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
123993760
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
123993760
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ogo04812
]
123993760
Cytoskeleton proteins [BR:
ogo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
123993760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Motif
Other DBs
NCBI-GeneID:
123993760
NCBI-ProteinID:
XP_046152192
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All DBs
Position
LG13:complement(97072441..97336142)
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AA seq
917 aa
AA seq
DB search
MTAINTANINFKWDPKSLEIRTLAVERLLEPLVTQVTTLVNSSNKGPSNKKKGRSKKAHV
LAASVETATLNFLDKGEKIAKESQFLKDELTAAVEDVRKQGESMKQASGEFAEDPCSSVK
RGNMVRAARALLSAVTHLLVLADMSDVYKLLLQLKLVEENLMKVRNAGTEQDLGIQYKAL
KPEVDKLNMMAAKRQQELKDVHHKDRMAAARGVLQRNIPMLYTASHACLQHPDLAAYKAN
RDLIYKQLQHAVSGISNAAQATASDDAAFNHPAGGGELAYALNNFDKQIIVDPLAFSEER
FRPSLEERLESIISGAALMADSSCTRDDRRERIVAECNSVRQALQDLLSEYMGNAGKKDK
SDALNTAIDRMTKKTRDLRRQLRKAVMDHVSDSFLETNVPLLVLIEAAKNGNEKEVKEYA
QVFREHANKLIEVANLACSICNNEEGVKLVRMAASQLETLCPQVINAALALAAKPNSKVA
QDNMDLFKESWEKQVRVLTDAXDDITSIDDFLCVSENHILEDVNKCVIALQEKDVDGLDR
TAGAIRGRAARVVHVVTCEMDNYEPGVYTEKVLEATKLLTNTVMPRFTEQVEAAVEALSA
NPTLPVDENEFIDASRLVYDGVRDIRKAVLMIRTPEELDDSDFETEDFDVRSRTSVQTED
DQLIAGQSARAIMAQLPQEQKAKIAEQVASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMC
MIMMEMTDFTRGKGPLKNTSDVISAAKKIAEAGSRMDKLGRTIADQCPDSACKQDLLAYL
QRIALYCHQLNICSKVKAEVQNLGGELVVSGEVSQAFLESQVDSAMSLIQAAKNLMNTVV
STVKASYVASTKYQKSMAMQSLNMPAISWKMKAPEKKPLVKREKQEDGSNNKVKRSSQKK
HINPVQALSEFKAMDSI
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgacagccataaacacggccaacataaacttcaaatgggatccgaagagcctggagatc
cgtaccctggctgtggagcggctgctggagcccttggtcacacaggtcacgaccctggtg
aactccagcaacaagggtccgtccaataagaagaagggtcgctctaagaaggcccatgta
ttggctgcctcggtggagacggccaccttgaacttcctggataaaggagagaagatcgcg
aaggagagccagttcctcaaggacgagctcactgctgccgtggaggatgtacgcaagcaa
ggtgaatccatgaagcaggcatcgggagagtttgcagaggacccctgttcctcggtaaag
aggggtaacatggtccgtgcagccagggcactcctctctgcagtcactcacctgctggtt
ctggccgacatgtctgatgtctataaactgctgctgcaactcaaactggtggaggagaac
ctgatgaaggtgcgtaacgctggaacagagcaggacctgggcatacagtacaaggccctg
aaaccagaggtggacaaactcaacatgatggctgccaagagacagcaggagttgaaggat
gttcaccataaggatcggatggcggctgcccgtggtgttctccagaggaacatccccatg
ctctacaccgcctcccacgcctgccttcaacaccctgacctggccgcatacaaggcgaac
cgtgatctgatctacaagcagcttcagcatgcagtctcaggcatctctaatgctgcccag
gctactgcctcagatgatgctgccttcaaccaccctgctgggggaggagagctggcctac
gctctcaacaactttgataagcagatcatcgtggaccccctggcgtttagcgaggagcgt
ttccgcccgtctctggaggagcgcttggagagcataatcagtggcgccgccctcatggcc
gactcgtcctgtacccgtgatgaccggcgcgagcgcatcgtggccgagtgtaactctgtc
cggcaggctctgcaggacctgctgtctgagtacatgggcaatgctggcaagaaggacaag
agtgatgctctgaacactgccatcgacaggatgaccaagaagacgagggaccttcgtaga
cagctgcgtaaggcggtcatggatcacgtctctgactcgttcctggagaccaacgttcct
ctgctggttctgatcgaagcggcgaagaacgggaacgagaaggaggtgaaggaatacgcc
caggtgttccgcgagcacgccaacaagctcatcgaggtggccaacctggcctgctccatc
tgtaataatgaggagggagtcaagctggtccgtatggccgcttcccagctggagacactc
tgcccccaggtgattaacgcggctctggctctagctgccaagcccaacagtaaggttgcc
caggacaacatggacctcttcaaagagtcctgggagaagcaggtccgcgttctcactgac
gccnncgatgacatcaccagcatcgacgacttcctctgtgtgtccgagaaccacattctg
gaggacgtgaacaagtgtgtgatagcgctgcaggagaaggatgtggacgggttggaccgc
acggccggcgccatccgtggccgcgccgccagagtggtccatgtggtcacgtgtgagatg
gacaactatgaacctggagtctatacagagaaggttctggaggccaccaagctgctcacc
aacacagtcatgcccaggttcacagagcaggtggaggcagcggtcgaggctctgagtgcc
aaccccacactccccgtggacgagaacgagttcatcgatgcctcccgtctggtctacgat
ggagtccgcgacatccgcaaggccgtgctgatgatccggactcctgaagagctggatgac
tctgactttgagacggaggactttgatgttcgcagcaggaccagcgttcagacagaagat
gaccagcttatcgcaggccagagcgccagggctatcatggcccagctgccccaggagcag
aaggctaagatcgctgagcaggtggccagtttccaggaagagaagagcaagctggacgcc
gaggtgtccaagtgggacgactccggcaacgacatcatcgtcctggccaaacagatgtgt
atgatcatgatggagatgacggacttcaccaggggtaaaggtccgttgaagaatacctct
gatgtcatcagtgctgcgaagaagattgctgaggctggatccagaatggataaactggga
cgcaccattgcagaccagtgtccagactcagcctgtaagcaggacctgttggcctacctg
cagcgtattgctctgtactgccaccagctcaacatctgtagtaaggtcaaagcagaggtc
cagaacctgggaggagagctcgtggtctctggggaggtttcccaagcattcctagagagc
caggtggacagtgccatgtctctgatccaggcagctaagaacctgatgaatacggtggtg
tccacggtcaaggcgagctacgtggcctccactaagtaccagaagtccatggccatgcag
tccctcaacatgcctgctatctcctggaagatgaaagccccagagaagaaacctctggtc
aagagagagaaacaggaagatggatccaacaacaaggtcaagaggtcatcccaaaagaag
cacatcaaccctgtccaggccctcagcgagttcaaagccatggatagcatctag
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