Oncorhynchus gorbuscha (pink salmon): 123993781
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Entry
123993781 CDS
T07892
Symbol
rlim
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF12-A
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
123993781 (rlim)
Enzymes [BR:
ogo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123993781 (rlim)
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123993781 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
123993781
NCBI-ProteinID:
XP_046152220
LinkDB
All DBs
Position
LG13:complement(100948171..100957049)
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AA seq
775 aa
AA seq
DB search
MEGSDSSEPGASDQPEAQRRRQLDRLDREEAFYQFVNNLSEADYRLMRDNNLLGTPGEIT
AEELLSRLQQIKDGPEQQQPSINTSETGEATGELTEPVEGPEDPSNGDTLLDWLNTVRRT
GNTTRSGHRGNQSWRAVSRTNPNSGDFRFSLEINVNRNLAEQQARAEGEAQEEGPAEAPG
DGVEAVVGVEVQAGTEAVVGVEVQAGTEAVVGVEVQAGTEAGTEAGAEAGAEAGAEAGAE
AGAEAGAEAGAEAGAEAGAEAGAGAGAGAGAGAGAEVPMETGEVLEEPVVEEMAVIVEPE
AEMEPEAEVEAEMVPELVVEVVPQPPSPVTATPPVSRPASPLVQATPAPAPPSPPSEEPP
RRGQRRARSRSPEQRRTRARTTRSRSPLTLDRLDGLPRHVPNAAPSHSPPPCPPGPRRGK
LTDSTACSVPAKHCRVRCPVSRNRVWEHPRARYHPTPGGRGRGRGGSAGRRPPTIMLDLQ
VRRVRPGEYRQRDSIANRTRSRSQNSNNTFLYESERGGFRRTFSRSERAGVRTYVSTIRI
PIRRISDAGLGEATSMALQTMIRQIMTGFGELSYFMDSDSDSSDSNRGGGNPTGAADLAE
ALNTPDVGVAGMAEGAEPPVSVGGPSVGGAGEARTEEGEEGVGVGLAPGIGLGVGGTPRE
GRGRPRAPISLEEPGSLPFLRLAHFFLLNDEDEEQPRGLTKEQIDNLSTRNFGESDALKT
CSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVSANRESVV
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggagggctccgacagttccgagccaggcgccagtgaccaaccagaggcccagcgcagg
cggcaactggaccggctagaccgggaggaggccttctaccagtttgtcaacaacctgagt
gaggcagactaccggctgatgagagacaacaacctgctgggtaccccaggtgagatcaca
gcagaggagttgttgagtcggctgcagcagattaaggatggaccagagcagcagcagcct
agcatcaacaccagtgagactggagaagctacaggagaactgacagaaccggtggaaggt
ccagaggacccgtctaacggcgacaccctcttggattggctgaacaccgtcaggcggaca
ggcaacaccacccgcagtggtcaccgaggcaaccagtcatggcgggcggtgagccggacc
aacccaaacagcggagacttccggttcagtctggaaatcaacgttaaccgtaacctggcc
gagcagcaggcccgcgccgagggggaggctcaggaggaaggcccagcagaagcacctggc
gatggggtggaggcagtggtcggagtggaggtccaggcagggactgaggcagtggtcgga
gtggaggtccaggcagggactgaggcagtggtcggagtggaggtccaggcagggactgag
gcagggactgaggcaggggctgaggcaggggctgaggcaggggctgaggcaggggctgag
gcaggggctgaggcaggggctgaggcaggggctgaggcaggggctgaggcaggggctgag
gcaggggctggggcaggggctggggcaggggctggggcaggggccgaggtgcccatggag
acaggagaggtgctggaggaaccagttgtggaggagatggctgtcatagtagaaccagaa
gcggagatggagccagaggctgaagtagaagctgaaatggtcccagagttagtagtagag
gtagtcccacagccgcccagccctgtcaccgccacccctcctgtctccagaccagccagt
cccctggtgcaggccaccccggcccccgccccccccagcccgccctctgaggagcctccc
cgacggggccagagacgagcccgcagccgtagccccgagcagcgccggaccagggctcgc
accacacggagccgttcccctctcaccctggaccgactggacggcctcccccgccacgtg
cccaatgccgccccttcacacagccccccaccctgccccccaggcccccgcagagggaag
ctcacggactcgacagcatgttctgtcccggcaaagcactgcagagtacgatgtccagtc
agccggaacagggtctgggaacaccccagagcccgttaccaccccaccccaggagggaga
ggtcgcgggcggggagggagcgcaggacgacgtccccccaccatcatgctggacctgcag
gtgcgtcgtgttcgtccaggtgagtaccgccagagggacagcattgctaacagaacccgc
tcacgctcccagaactccaacaacaccttcctgtacgagagtgagaggggggggttccgc
aggaccttctcccggtccgagcgtgcgggtgttcggacgtacgtcagcaccatcaggatc
cccatcaggaggatcagtgatgcagggttgggagaggccacctccatggctctgcagacc
atgatacgacagatcatgaccggcttcggagagctcagctacttcatggactcggactct
gactcctcggactcaaaccgtggcggtggtaaccccactggcgctgccgacctggcagag
gcgctcaacactcccgacgtgggagtagccggcatggcggagggggcggagcctcctgtc
tcagtgggtgggcctagtgtgggaggagccggggaggcaaggacagaggagggagaagag
ggggttggtgtaggtctggccccagggataggtttaggggtcgggggcacccccagggag
gggcgaggtcgcccccgtgcccccatcagtctggaggaaccagggtcgctacccttcctc
cgccttgctcacttcttcctcctgaatgatgaggatgaggaacagcccagaggactcacc
aaggagcagatcgacaacctctccaccaggaactttggggagagtgatgctctgaagacc
tgcagtgtgtgtatcacagagtatgctgaggggaacaagttgaggaagttgccttgttct
catgaataccatgttcactgtatcgaccgctggctgtctgagaactccacctgtcctatc
tgccgcagggccgtgttggtgtctgctaaccgggagagtgtggtctaa
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