Oncorhynchus gorbuscha (pink salmon): 123993845
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Entry
123993845 CDS
T07892
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123993845 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
123993845 (dhx36)
03012 Translation factors [BR:
ogo03012
]
123993845 (dhx36)
Enzymes [BR:
ogo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123993845 (dhx36)
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
123993845 (dhx36)
Translation factors [BR:
ogo03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
123993845 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
AAA_19
NB-ARC
ATPase
NPHP3_N
AAA_16
DUF7428
Motif
Other DBs
NCBI-GeneID:
123993845
NCBI-ProteinID:
XP_046152266
LinkDB
All DBs
Position
LG13:complement(10844060..10900570)
Genome browser
AA seq
1045 aa
AA seq
DB search
MSYGGYGGRGGRRGGRRGGRGFGRDGSRERWDRLAGSSGGGHPRSTETESREDRGERGGR
GGGPNRPPPHLKGREIGLWYAKWGGLKRKENERKSRAVVQMDESREQHITNLLNTVQRGP
TCPATEAHPSTSEHWRSTPSAPDRGSHCYFDGDEPSQDVLKIDLKQEKKEDEERPVQNTP
LTSQRYFPQDVLKAEPREEREEKERRGKDKDLEYLFQEVVRENALDQQLKRDLERKKADS
KYLDMLKFREKLPSFGKKEELVELIRSSQVLVVSGETGCGKTTQVTQFILDDYIERGMGS
VCRVVCTQPRRISAISVAERVAAERAESVGDGNSCGYQIRLQSRLPRKQGSVLYCTTGII
LQWLRSSPLLSTISHLVLDEIHERNLHSDVLLIIVKDLLRVRQDLKVILMSATLNAEKFS
KYFNNCPMIHIPGMTFPVQEFLLEDVLEMIRYRPQKKEQRPRWKRGFMQGQNSRPEKDQK
EAEYKESWPCYARTLRDKYSDRTIDVLEMMDDDDKIDLELIVQLIRHIVLSQEEGAILVF
LPGWDNISGLNDLLMAQQMFKSDGFVIIPLHSLMPTVTQTSVFKRPPPGVRKIVIATNIA
ETSITIDDVVFVIDGGKIKETHFDTQNNISTMTAEWVSLANAKQRRGRAGRVSQDTIKIL
KLGQIAEFLRKALDPPTEEAVTLAITHLMDLNALDRSEALTPLGFHLARLPVEPHIGKLI
LFGALLGCLDPVLTIAASLSFKDPFFIPMGKEKMADFRRRTLSRDSKSDHLTIIYAFTGW
EEAKRRGYKFEREFCWDNFLSANTLQMLHNMKGQFAEHLLGAGFTSSKNPKDPESNTNSD
NEKLIKAVIVAGLYPKVAMIKPSGSKKRPVRVYTKTDGKVCIHPKSVNAEETQFNYTWLI
YHLKMRTSSIFLYDCTEVSPFSLLFFGGDVTIQMDQDQETIAVDDWIVFQSPARIAHLVK
NLKKELDSLLEEKIRSPAPVDWSNRQSKDCAVITAIIDLITTQERPNVNARNTEPRGRRQ
YHNNDDGDEYENCCISSQPREKLRP
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgagttatggaggttatgggggcagaggcggccgacgaggtggccgaagaggaggtcga
ggattcggacgggatgggagccgggagaggtgggaccgcctagctgggtcgagtggtggt
ggacacccgcggagcaccgaaacggagtcgagggaggaccggggagaacgaggagggaga
ggtgggggaccaaaccgtccacccccgcatctaaagggccgggagatcggactgtggtac
gccaaatggggaggcttgaagaggaaagaaaatgagagaaaatcgcgggcagtggttcag
atggatgagtccagggaacagcatatcactaatctgctgaacactgtccagagaggaccg
acatgcccagccacggaggcccacccctccacatctgagcattggcgttcaaccccgtca
gctccggacagaggcagccactgttactttgatggtgatgagccctctcaggatgtcctg
aaaattgatctcaaacaagagaagaaggaggatgaggagaggccagtacagaacactcca
ctcacatcacaacgttacttcccacaggatgtccttaaagctgaaccccgagaagagagg
gaggagaaggagaggagagggaaggataaagacctggagtacttgtttcaggaggtggtc
agggagaatgccctggaccagcagttaaagagagatctagagaggaagaaggcggactct
aaatacctagacatgctgaaattcagggaaaagcttccatcctttggaaaaaaagaggag
ttggtggagttgatcaggtccagccaggtgctggtggtcagtggagagactgggtgtggt
aagaccacccaggtgacccagtttatcctggatgactacatagagaggggtatgggttca
gtctgcagggtggtctgcacccagccacgtcgcatcagtgccatatctgtagcggagcgg
gtggctgcggagagggctgagagtgtaggggacgggaactcatgtggttatcagatccgc
ctgcagagtcggttgccacggaaacagggctcggtgctgtattgtacaacgggtattatt
ctacagtggcttcgctcttcccctctgttgtccaccatcagccacctggttttggatgaa
attcatgagaggaaccttcactctgatgttctactgatcattgtcaaagacctgctccga
gtccgacaggacctcaaggtcatcctcatgagtgccacgctcaacgctgagaagttctcc
aaatactttaataactgtcctatgatccacatccccgggatgaccttcccagtgcaagag
ttcctactggaggatgtgttggagatgattaggtaccgtccccagaagaaggagcagagg
cccaggtggaagagaggtttcatgcagggtcagaactccagaccagagaaggaccagaaa
gaggccgagtacaaggagagctggccctgctacgcccgcacactacgagacaagtactct
gacagaaccatagatgtgttggagatgatggacgatgatgataagattgaccttgagctc
atcgtgcagctgatcagacatatcgtgctaagccaggaagaaggagccatcttggtgttc
ctgccaggttgggacaacatcagtggcctcaatgacctcctcatggctcagcagatgttc
aaatcagatgggtttgtgatcattcctctgcactccctgatgccgactgtcacccagacc
tcggtgttcaaaaggccccctccaggagtcaggaagattgtcattgccaccaatatcgct
gagaccagtattaccatagatgatgtggtgtttgtgatagatgggggaaagattaaggag
actcactttgacactcagaacaacatcagcactatgactgcagaatgggtcagcctggcc
aatgccaaacagagaagaggacgcgctggcagagtgagccaggacacaatcaagatcctc
aagctgggtcaaatagcagagttcctgaggaaagctctggaccctcccacagaggaggct
gtcactctggccatcacacacctgatggacctaaatgctctggaccgctcagaggctctg
accccgttaggcttccacctggccaggctgcctgtagagcctcacatcgggaagctgatc
ctgtttggtgctctgctgggctgtttggaccctgtcctcactatcgctgcctctctcagc
ttcaaggaccccttcttcataccaatgggtaaggagaagatggcagactttaggagaaga
actctgtccagagactcaaagagtgaccacctcaccatcatctatgccttcacaggctgg
gaggaagctaagcgacgcggctacaagtttgaacgagagttctgctgggacaacttcctg
tcagccaatacactccagatgctgcacaacatgaagggtcagtttgccgagcacctgctg
ggggctggcttcaccagcagcaagaacccaaaagaccctgaatctaacactaactcagat
aatgagaagctgatcaaggcagtgatagtggcaggtctctaccccaaagtggccatgatc
aaaccgagcggcagcaagaagagaccggtgagggtgtataccaaaaccgatgggaaggtg
tgtattcaccccaagtcagtgaatgctgaggagacccagtttaactacacatggctcatc
tatcacctcaagatgaggaccagcagtatcttcctgtacgactgtacggaggtgtctccg
ttctccctgctgttctttggaggtgacgtcaccatacagatggatcaggaccaggagacc
atcgccgtggacgactggatcgtgttccagtcccccgcacgcatcgctcacctcgttaag
aatctgaagaaggagctggactctctattggaagagaagatccgaagccccgcccctgtg
gactggagcaaccgccaatccaaagactgtgccgtcatcacagccatcatagacctcatc
accacccaggagaggcccaacgttaacgcgaggaacactgagcctagaggacgccgccag
tatcacaacaacgatgatggtgacgagtacgagaactgctgcatctcttctcaacccaga
gaaaagctcaggccatag
DBGET
integrated database retrieval system
