KEGG   Oncorhynchus gorbuscha (pink salmon): 123993894
Entry
123993894         CDS       T07892                                 
Name
(RefSeq) coatomer subunit beta'-like
  KO
K17302  coatomer subunit beta'
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ogo04131]
    123993894
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ogo04147]
    123993894
Membrane trafficking [BR:ogo04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    123993894
Exosome [BR:ogo04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   123993894
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_WDR75_1st EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st NBCH_WD40 ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_IFT122_1st WDR90_beta-prop_4th PEP5_VPS11_N Beta-prop_SPT8 WD40_RFWD3 Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_LRRK2 Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 123993894
NCBI-ProteinID: XP_046152323
LinkDB
Position
LG13:complement(22444010..22463824)
AA seq 870 aa
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMVASLYNGSVCVWNHETQTLVKTFEVCDLPV
RVAKFVARKHWVIAGADDMQIRVFNYNTLERTHMFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWDRKWVCGQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHTQNVSCVSFHPE
LPIILTGSEDGTVRLWHSSTYRLENTLNYGMERVWCVCGQRGANSVALGYDEGSIIIKLG
CEEPAMSMDSNGKIMWAKHSEVQQANLKAMGEAEIQDGERLSLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWGHDSSEYATRESTSMVKIFKNFKE
NKSFKPDFGAEGIHGGFLLGVRSVSGLAFYDWENTELVRRIEIQPKHVFWSESGELVCIA
TEESFFVLRYLAEKVATAQETKEGVTEDGIEDAFEVLGEIQEVVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTVAHLDRTMYLLGYIPKDDRLYLGDKELNIVTYSLLVSVLEYQTAVMR
RDFGMADRVLPTIPKEMRTRVAHFLEKQGFMQQALAVSTDSEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELATTKCQFVLAQECLHHAQDYGGLLLLATASGNTTMVGKLAEGAE
RDGKTNVAFLTYFLQGKLDKCLELLIKTNRLPEAAFLARTYLPSHVSRVVKLWKENLGKV
NQKAADALANPTDYSNLFPGLQEAFLAEDYLKETHVRLRPAAEYPLITVSRYTHILGTLW
QKFCSRFGSFSSVSYLFNTTLIEHVLSILH
NT seq 2613 nt   +upstreamnt  +downstreamnt
atgcctctccggttggacatcaagcggaagctgaccgctcggtcggaccgtgtgaagagt
gtggacctgcacccaactgaaccatggatggttgccagcctgtacaatggcagtgtctgt
gtctggaaccatgagacacagaccctggtgaagacattcgaggtgtgtgacctgcctgtg
agagtggctaagtttgtggcgaggaagcactgggtcattgcaggagcagatgacatgcag
atccgtgtgtttaactacaacactctggagagaactcacatgtttgaggcccactctgac
tacatccgctgcatcgcagtccacccaacacaaccttacatccttaccagcagtgatgac
atgctgatcaagctttgggactgggacaggaagtgggtgtgtggtcaggtgtttgagggc
cacacccactatgtcatgcagatcgtcatcaaccctaaagacaacaaccagtttgccagc
gcctccctggacaggaccattaaggtctggcagctgggatcttcctcccctaacttcact
ctggagggccatgagaaaggagtcaactgtatcgactactacagtggaggggacaagccc
tatcttatatcaggagctgacgaccgcctggtcaagatctgggactaccagaataagaca
tgtgtgcagactctagagggccatacccagaatgtgtcctgtgtcagctttcaccctgag
ctgccaatcattctcacaggctccgaggacggcacagtgagactatggcattccagcacg
taccgcctggaaaacacactgaactatgggatggaacgtgtgtggtgtgtgtgtggccaa
cgaggcgccaacagtgtggcgctgggatatgatgaaggcagcatcatcatcaagttgggt
tgtgaggaaccagccatgtctatggactctaacggtaagatcatgtgggccaagcactct
gaggtgcagcaggccaacctgaaggccatgggagaggctgagatacaggacggagagagg
ctgtccctggccgtcaaagacatgggcagctgtgaaatctatccccagaccatccagcac
aaccccaacggcaggtttgtggtggtgtgtggggatggagagtacatcatctacactgca
atggccctgaggaacaagagcttcggttcagcacaggagtttgtctggggccacgactcc
tcagagtatgctactcgggagagcaccagcatggtcaaaatcttcaagaacttcaaggaa
aataagtcttttaaaccagactttggggcagaaggtatccatggtgggttcttgctgggc
gtgaggtcagtgagtggtctggccttctacgattgggagaacacagagctggtccgccgc
attgagatccagcctaaacacgtcttctggtcagagtctggggagctggtgtgtattgcc
acggaggagtctttctttgtgctgcgctacctggctgagaaagtggcaacagcacaggag
accaaggagggagtcactgaggatgggatagaggatgccttcgaggtgttgggtgagatt
caggaggtggtgaagactggtctgtgggtgggagactgtttcatctacaccagctcagtc
aacagactcaattactacgtaggaggagagattgtcaccgtcgcccacctggacagaact
atgtacctgttgggctacatccctaaggatgaccgtctgtatctgggtgataaggagctg
aacatcgtcacttactctctgctggtgtcggtactggagtaccagacagctgtaatgagg
agggactttgggatggccgacagggtcctacccaccatccctaaagagatgaggaccagg
gtcgcccactttttagagaaacagggtttcatgcagcaggctctggctgtgtccacagac
tcagaacacaggtttgagttggctctgcagctaggagaactgaagatcgcctaccagctg
gctgtagaggctgagtcggagcagaagtggaagcagttggcagagctggccaccactaag
tgccagtttgtcctggcccaggagtgtctgcaccatgcccaggactatggggggctactg
ctgttggccacagcctcgggcaacaccaccatggtgggcaagctggcagagggggcagag
agagatggcaagaccaacgtggctttcctcacctatttcctccaggggaaactggacaaa
tgtctggagctcctcattaaaaccaaccggctgccagaggctgcattcctggccagaaca
tacctgcccagccatgtgtctagagtggtgaagctgtggaaggagaacctggggaaggtg
aaccagaaggcggctgatgcgttggctaaccctacagactacagcaacctgttccccggc
ctacaggaggccttcctggccgaagactacctcaaggagacccacgtcaggctgaggccc
gccgcggagtaccctctcatcaccgtgagtagatacacacacatcttgggaacattgtgg
caaaaattttgcagccgttttggatcattttcttctgtttcatacttatttaacacaacc
ctgattgaacatgttctttccatcttacactga

DBGET integrated database retrieval system