Oncorhynchus gorbuscha (pink salmon): 123994075
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Entry
123994075 CDS
T07892
Name
(RefSeq) neuronal PAS domain-containing protein 4A-like
KO
K26457
neuronal PAS domain-containing protein 4
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
123994075
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
123994075
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Gene cluster
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
HLH
Motif
Other DBs
NCBI-GeneID:
123994075
NCBI-ProteinID:
XP_046152521
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Position
LG13:complement(66830251..66836323)
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AA seq
915 aa
AA seq
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MYRSTKGASKARRDQINAEIRNLKDLLPISDADKARLSYLHIMSLASMYTRKSVFFSQES
GSAGSLEESARFLSFHELSELVQELPGFLLLLTGEGKLLYLSDSVSEHLGHSMVDLVAQG
DSVYDIIDPTDHFIMRTNLAPPTSPDTDHLFRCRFNTSKSVRRQSAGNKLVLIRARCLSP
PSSSSTPSSYWTSNPVWMCFCSPLEAVPTRFGPGGDQVPALIPPAAENNFFLASFQSQHS
RDMRLQNAQDSVSVYLGLDVSALRSRSWYSLLHPQDLSHASAQHCSLLREGGEGRSEMVV
RVESADQSWVWLYMVLQLEAGDSPISSNNYILSEAEGWSVRQQLSTEQTQLTLVLSTSTS
RQDSLSLSSPDQVFTPSSSGLSAQSFDFSMTVSSVGSSDETGGATTEPMQVEGDPRSSIS
SIEEESFFQQQQMPAPVQSPSAASSPTPVTVATVADLDFLTQNILLPPSFQLEPPLPALP
LPLPPAPTSQEQQTKEFVCTPPYTPQLGGGSFLFGEPLFSFDPTGTTTPPPSTTTATATT
SIATSLSPSAPPPPPTTASSPAPPSSLCLTGPSTDLFFPADPCSGSLYEKLPPTPDSPGD
GDCTVMTLPEVRGPLYVDVPLGSLHYPLEGLLTPEASPGKQPCLSFFSLEREREKERAEI
SLLAQHISSLAEGFYLDPLLSKLSPPSMSPSSSPPSPSLSPSIDTAGVDPSHMLGEFYPV
KAWRGLDFPIFHDDESLFEESILEALLQDFSTPPPLSPNPPSPPNPVCWHSPSHFEGVSH
FCSVQSAHCNPTAGCGATLAGESGAMAEVEGLVEEPMEIEVASSPLSTCSSIPASPPLRL
TASPTSAPSTPVDHSTPAVPCAQSLLEELAALEPMFGAGASIAPGLGQQPELYQLQCHQP
PQCFHKDGSGSVPPF
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgatcaacgaagggagcgtcaaaggctcggagggaccaaatcaacgcggagatt
cggaacctgaaggacttgcttcccatatccgatgcggacaaggcacgactctcataccta
catatcatgtcccttgccagcatgtacaccaggaaatcggttttcttctctcaagaatcg
ggatctgctggcagtctcgaggaaagcgcgaggttcctgtctttccacgagctgtcagag
ctggtgcaggagctacctgggtttctgctcctgttgaccggggaaggcaagctgctctac
ctgtcagacagcgtctccgagcacctcggccactccatggtggatttggttgcccagggt
gacagtgtgtatgatatcattgaccctactgaccacttcatcatgaggaccaacctggcc
cctcctacgtcacctgacacagatcatctattccgttgtcgtttcaacacttccaagtcg
gtgcgcaggcagagtgccgggaacaagctggttctgatccgggcgcgctgcctgtcccct
ccctcctcctcttccacccctagctcctactggacatccaaccctgtttggatgtgcttc
tgttcccctctggaggcagtccccacccgctttggccctgggggggaccaagttcctgct
cttatccctcctgctgctgagaacaacttcttcctagcctcgttccagtctcaacacagc
cgagacatgaggctccagaatgcacaggacagtgtcagtgtttacctaggtctcgatgtg
tcagccctgaggtctcgttcctggtacagcctcctccacccacaggacctgtcacacgcc
tctgctcagcactgcagcctgttgagagaaggaggagaaggtagatctgagatggtggta
cgggtggagtctgcagaccagtcctgggtctggctttacatggtactgcagctggaggca
ggagacagccccatcagcagcaacaactacatacttagtgaagcggaggggtggtcagtg
agacagcagctgagcacagagcagacacagctgaccctggtactgagtaccagtacctcc
cgccaggacagcttgagcctgtccagcccagaccaagtcttcacccccagcagcagtggt
ctctcagcccagtcctttgacttcagcatgactgtgtcgagtgtgggctcctccgatgag
acagggggtgccactactgaacccatgcaagtggagggagaccctcgctccagtatttcc
tctattgaggaggagagcttcttccagcagcagcagatgcctgcccctgtccaaagccca
tccgctgcctcctcccccaccccggttaccgttgccacggtagcagatctggacttcctc
actcagaacattctcttgcccccttccttccagctcgaacctccgctgcctgcccttccc
ctgcccctccccccagcgcccacctctcaggagcagcagaccaaagagtttgtgtgcacg
cccccctacacaccccaactgggcggtggcagcttcctgttcggcgagcccctctttagc
ttcgaccccactggcaccaccacaccccctccctccaccaccacagctacagccaccacc
tccattgccacctccctctccccctccgccccaccccccccacccaccacagcctccagt
cctgctcccccctcctccctgtgcctcactggcccctccactgacctgttcttccctgct
gatccctgcagtggctctctctatgagaagctaccccccacccctgacagccctggggat
ggggactgcacagtgatgaccttgcctgaggttcggggacccctgtatgtagatgtccct
ttagggtcccttcactaccccctcgagggcctcctcaccccagaggcctcccccggtaaa
cagccctgtctctctttcttctccctggagagagagagggagaaggagagagcagagatc
tccctcttagctcagcacatcagctccttagcagagggattctacctggatcctctctta
tccaagctatcccctccttccatgtccccctcctcctcccctccctccccctccctctcc
ccatccatagacaccgctggtgttgaccctagccacatgctgggagagttttacccggtt
aaagcgtggagaggcctggacttccccatattccatgatgatgaatctctgtttgaagag
agcatcttagaagcccttctccaggacttctccacccctccgcccctctcccccaacccg
ccctctccccccaacccagtgtgctggcactcaccctcccactttgagggggtcagccac
ttctgtagcgtccaatcggcgcactgtaaccccacggccgggtgcggggcgacgttggcc
ggcgagtccggggcgatggcagaagtggaggggctggtggaggagcctatggagattgag
gtggcgtcatcacctctgtccacctgttcctccattccagcatcccctcccctgcgactc
actgcctcccccacctccgccccctccacgcctgtcgaccactctacacccgccgtgcct
tgcgctcagtccctcctggaggagctggccgccctggaacccatgtttggggcaggtgcc
tcgatcgcccccggcttgggtcaacaacctgagttgtatcaactccagtgtcaccagccg
ccacagtgcttccacaaagatgggagtggaagtgttcccccgttctaa
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