Oncorhynchus gorbuscha (pink salmon): 123994172
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Entry
123994172 CDS
T07892
Name
(RefSeq) transcription factor COE1-A-like isoform X1
KO
K09103
early B-cell factor
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
123994172
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
123994172
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GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
HLH
Motif
Other DBs
NCBI-GeneID:
123994172
NCBI-ProteinID:
XP_046152654
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Position
LG13:87404077..87554742
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AA seq
519 aa
AA seq
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MFGIQENIQRSGSVMKEEPLLTGMNAVRSWMHGAGLLDANTAAQSGVALARAHFEKQPPS
NLRKSNFFHFVLALYDRQGQPVEIERTSFVGFVEKEKETSGEKTNNGIQYRLLLLYSNGI
RTEQDFYVRLIDSMTKQAITYEGQDKNPEMCRVLMTHEIMCSRCCDKKSCGNRNETPSDP
VIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVSVDGHVLSVSDNIFVHNNSKH
GRRARRLDPSEGTPSYLEHATPCIKAISPSEGWTTGGATVIIIGENFFDGLQVIFGTMLV
WSELITAHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGTPGCYIYTALNEPTIDYGFQRLQ
KVIPRHPGDQERLPKEVILKRAADLVEALYGMPHNNQEMILKRAADMAEVLYTTVPRGHN
QLLGSGSVHASMMAVNSFPGSEVTQAANQGYSRSSSSASPHGYVPSTTPQQTSYSSVSTS
MNGYTDSGMTTLGTSPNFLNGSATNSPYAMIPGMIDPSM
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggatccaggagaacatccagaggagcggaagtgttatgaaagaagagcccttg
ttgaccgggatgaacgccgtccggagctggatgcatggcgccgggctgctggacgcaaac
acagccgcccagagcggagtggctctagcccgggcacatttcgagaaacaaccaccctcc
aaccttcgcaagtccaacttcttccacttcgtgctggctctgtacgacagacaagggcag
ccggtggagatagagagaaccagcttcgttggatttgttgaaaaggaaaaggaaacgtca
ggggaaaagaccaacaatgggatacagtacaggctactgctcctatacagcaatggtatc
aggacagaacaggacttttacgtgcgcctcatcgattccatgaccaaacaggcgatcacc
tatgagggacaggataagaaccctgaaatgtgtcgggttttaatgactcatgagatcatg
tgcagtcggtgttgtgataagaaaagttgtggcaacagaaacgagacaccctctgacccc
gtcatcattgacaggttcttcctcaagttcttcctgaagtgcaaccagaactgtctgaag
aacgcagggaacccacgagacatgaggcgctttcaggtggtcgtgtctaccactgtgagt
gtggacggtcatgtcctctctgtctctgacaacatctttgtccacaacaactctaaacac
ggtcgccgggccaggagattagacccctcagaaggaacaccctcgtacctggagcatgcc
accccctgtatcaaggcgatcagccccagtgagggctggacaacaggcggggccacagtc
attatcattggagaaaacttctttgatggactccaggtcatatttggtaccatgctagtc
tggagtgagctgatcacagcccatgccatccgggtgcagactccccccagacacatcccc
ggggtcgtagaggtcacgctgtcatacaagtcgaaacagttctgcaagggcacacctgga
tgctacatatacacagcgttgaatgagcccactatagattacggcttccagaggttacag
aaagtcatccccagacatccaggagaccaggagagactgcctaaggaagtcattctaaag
agagcggcagacttggtagaagcgctctacgggatgccacacaataaccaggagatgatt
ttgaagcgggcagctgacatggcagaggtgttgtatacgacggtgccacgcggccacaac
cagctgttaggcagcggctccgtccacgccagcatgatggccgtcaactccttccccggg
tcagaggtcacacaggcagccaatcagggttacagtaggagtagcagcagtgcatctcct
catggttatgtccccagcaccactccacagcagaccagctacagctctgtttccactagc
atgaacggctacactgactctggcatgaccacgctaggaacctcacccaacttcctcaac
gggtcagccaccaactcaccctatgctatgattcccgggatgattgatccatccatgtag
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